POPTR_0019s14130 (Populus trichocarpa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 POPTR_0019s14130 T278544_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0019s14130.1 Myb 14 61
POPTR_0019s14130.1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Populus trichocarpa TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
cassava14699.m1 Manihot esculenta cassava14699.m1 I 0.708
cassava6764.valid.m1 Manihot esculenta cassava6764.valid.m1 I 0.699
Ca_22597 Cicer arietinum Ca_22597 N 0.663
Ciclev10017677m.g Citrus clementina Ciclev10017677m.g I 0.719
Cla000782 Citrullus lanatus Cla000782 N 0.666
Eucgr.A01767 Eucalyptus grandis Eucgr.A01767 I 0.668
Eucgr.B00866 Eucalyptus grandis Eucgr.B00866 I 0.674
GLYMA13G37903 Glycine max GLYMA13G37903 I 0.661
Gorai.008G151100 Gossypium raimondii Gorai.008G151100 I 0.711
Gorai.011G021300 Gossypium raimondii Gorai.011G021300 N 0.685
GSMUA_Achr4G28850_001 Musa acuminata GSMUA_Achr4G28850_001 I 0.664
MDP0000155426 Malus domestica MDP0000155426 I 0.665
MTR_0008s0470 Medicago truncatula MTR_0008s0470 N 0.675
orange1.1g042846m.g Citrus sinensis orange1.1g042846m.g I 0.728
PGSC0003DMG401026177 Solanum tuberosum PGSC0003DMG401026177 I 0.667
PGSC0003DMG402026177 Solanum tuberosum PGSC0003DMG402026177 I 0.662
POPTR_0019s14120 Populus trichocarpa POPTR_0019s14120 I 0.687
SapurV1A.0417s0140 Salix purpurea SapurV1A.0417s0140 N 0.864
SapurV1A.0417s0150 Salix purpurea SapurV1A.0417s0150 I 0.690
Solyc07g053230.2 Solanum lycopersicum Solyc07g053230.2 I 0.667
Solyc07g054960.1 Solanum lycopersicum Solyc07g054960.1 I 0.731
Solyc07g054980.1 Solanum lycopersicum Solyc07g054980.1 I 0.680
TCM_007868 Theobroma cacao TCM_007868 I 0.661