PRUPE_ppa008539mg (Prunus persica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 PRUPE_ppa008539mg T278615_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
fgenesh1_pg.scaffold_70000111
M02342_2.00
Physcomitrella patens
NNHNATCBN

NVGATNDNN
PBM
Weirauch et al.(2014)
pTH8492
0.878 0.957
PK17526.1
M02353_2.00
Cannabis sativa
NNTTATCCAN

NTGGATAANN
PBM
Weirauch et al.(2014)
pTH9588
0.860 0.936
AT3G16350
M01078_2.00
Arabidopsis thaliana
NYTATCYDNN

NNHRGATARN
PBM
Sullivan et al.(2014)
pTH7149
0.857 0.894
PK23829.1
M02355_2.00
Cannabis sativa
VTTATCCD

HGGATAAB
PBM
Weirauch et al.(2014)
pTH9592
0.849 0.936
PK29550.1
M02358_2.00
Cannabis sativa
NNHDATCYNN

NNRGATHDNN
PBM
Weirauch et al.(2014)
pTH9595
0.847 0.872
0600010132
M02360_2.00
Ostreococcus tauri
NNVTTATCCDNNN

NNNHGGATAABNN
PBM
Weirauch et al.(2014)
pTH9441
0.824 0.894
KUA1
M02312_2.00
Arabidopsis thaliana
NNTTATCCDN

NHGGATAANN
PBM
Weirauch et al.(2014)
pTH7647
0.819 0.894
KUA1
M07136_2.00
Arabidopsis thaliana
WWHHTTATCCAHWW

WWDTGGATAADDWW
Dap-seq
OMalley et al.(2016)
At5g47390_colamp_a
0.819 0.894
KUA1
M07137_2.00
Arabidopsis thaliana
HHWDYHTTATCCAHW

WDTGGATAADRHWDD
Dap-seq
OMalley et al.(2016)
At5g47390_col_b
0.819 0.894
PK00738.1
M02346_2.00
Cannabis sativa
NYWATCYDNN

NNHRGATWRN
PBM
Weirauch et al.(2014)
pTH9487
0.798 0.872
AT5G61620
M07149_2.00
Arabidopsis thaliana
WWHHTTATCCAHWWN

NWWDTGGATAADDWW
Dap-seq
OMalley et al.(2016)
AT5G61620_col_a
0.793 0.809
AT5G61620
M07150_2.00
Arabidopsis thaliana
YHTTATCCAHW

WDTGGATAADR
Dap-seq
OMalley et al.(2016)
AT5G61620_colamp_a
0.793 0.809
AT1G19000
M02287_2.00
Arabidopsis thaliana
NYTATCYDNN

NNHRGATARN
PBM
Weirauch et al.(2014)
pTH7120
0.786 0.851
AT1G19000
M07012_2.00
Arabidopsis thaliana
HDYHTTATCCAHWW

WWDTGGATAADRHD
Dap-seq
OMalley et al.(2016)
At1g19000_col_a
0.786 0.851
AT1G19000
M07013_2.00
Arabidopsis thaliana
WDYNTTATCCAHWW

WWDTGGATAANRHW
Dap-seq
OMalley et al.(2016)
At1g19000_colamp_a
0.786 0.851
AT5G56840
M07144_2.00
Arabidopsis thaliana
WWYMTTATCCAWWWN

NWWWTGGATAAKRWW
Dap-seq
OMalley et al.(2016)
AT5G56840_col_a
0.768 0.830
AT5G56840
M07145_2.00
Arabidopsis thaliana
HHHWWYHTTATCCWHW

WDWGGATAADRWWDDD
Dap-seq
OMalley et al.(2016)
AT5G56840_colamp_a
0.768 0.830
AT1G74840
M02291_2.00
Arabidopsis thaliana
NGWTATCCRNN

NNYGGATAWCN
PBM
Weirauch et al.(2014)
pTH7074
0.740 0.894
AT1G74840
M07037_2.00
Arabidopsis thaliana
HHTTATCCAHW

WDTGGATAADD
Dap-seq
OMalley et al.(2016)
At1g74840_col100_a
0.740 0.894
AT1G74840
M07038_2.00
Arabidopsis thaliana
HWNHTTATCCAHWW

WWDTGGATAADNWD
Dap-seq
OMalley et al.(2016)
At1g74840_colamp_a
0.740 0.894
AT3G10580
M07072_2.00
Arabidopsis thaliana
AWBCTTATCYWHWHH

DDWDWRGATAAGVWT
Dap-seq
OMalley et al.(2016)
AT3G10580_col_a
0.727 0.681
AT3G10580
M07073_2.00
Arabidopsis thaliana
CCGAWAAWNTCGGDD

HHCCGANWTTWTCGG
Dap-seq
OMalley et al.(2016)
AT3G10580_colamp_a
0.727 0.681
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EMJ23841 Myb 89 136

Links

Other Myb/SANT family TFs
Other Prunus persica TFs

598 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bm3681 Brugia malayi Bm3681 N 0.000
HPLM_0000501901 Haemonchus placei HPLM_0000501901 N 0.000
L596_g23719 Steinernema carpocapsae L596_g23719 N 0.000
L889_g29456 Steinernema feltiae L889_g29456 N 0.000
L892_g21703 Steinernema scapterisci L892_g21703 N 0.000
L893_g27223 Steinernema glaseri L893_g27223 N 0.000
L898_g6841 Steinernema monticolum L898_g6841 N 0.000
nDi.2.2.2.g01416 Dirofilaria immitis nDi.2.2.2.g01416 N 0.000
nRc.2.0.1.g22459 Romanomermis culicivorax nRc.2.0.1.g22459 N 0.000
PTRK_0001785400 Parastrongyloides trichosuri PTRK_0001785400 N 0.000
SMUV_0000904801 Syphacia muris SMUV_0000904801 N 0.000
SPAL_0000385600 Strongyloides papillosus SPAL_0000385600 N 0.000
SSTP_0000865200 Strongyloides stercoralis SSTP_0000865200 N 0.000
SVE_1904900 Strongyloides venezuelensis SVE_1904900 N 0.000
TMUE_s0010015900 Trichuris muris TMUE_s0010015900 N 0.000
EVEC_0000655901 Enterobius vermicularis EVEC_0000655901 N 0.000
D918_03480 Trichuris suis D918_03480 N 0.000
CBG10736 Caenorhabditis briggsae CBG10736 N 0.000
CBN24068 Caenorhabditis brenneri CBN24068 N 0.000
CBN31083 Caenorhabditis brenneri CBN31083 N 0.000
CJA12606 Caenorhabditis japonica CJA12606 N 0.000
CRE10982 Caenorhabditis remanei CRE10982 N 0.000
EFV59106 Trichinella spiralis EFV59106 N 0.000
GB49657 Apis mellifera GB49657 N 0.000
LOAG_17507 Loa loa LOAG_17507 N 0.000
SINV25541 Solenopsis invicta SINV25541 N 0.000
zag-1 Caenorhabditis elegans WBGene00006970 N 0.000
YQE_02569 Dendroctonus ponderosae YQE_02569 N 0.000
YQE_04155 Dendroctonus ponderosae YQE_04155 N 0.000
HHAL001339-PA Halyomorpha halys HHAL001339-PA N 0.000
ASU_02713 Ascaris suum ASU_02713 N 0.000
TTRE_0000009201 Trichuris trichiura TTRE_0000009201 N 0.000