PRUPE_ppa024074mg (Prunus persica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 PRUPE_ppa024074mg T278751_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GRMZM2G005066
M11056_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$C1_Q2
0.716 0.710
MYB3
M02288_2.00
Arabidopsis thaliana
NNYACCTACCN

NGGTAGGTRNN
PBM
Weirauch et al.(2014)
pTH7125
0.706 0.731
MYB4
M02303_2.00
Arabidopsis thaliana
YACCWACY

RGTWGGTR
PBM
Weirauch et al.(2014)
pTH7075
0.706 0.731
MYB4
M07115_2.00
Arabidopsis thaliana
NYYACCWAMHWHNDD

HHNDWDKTWGGTRRN
Dap-seq
OMalley et al.(2016)
MYB4_col200_a
0.706 0.731
MYB111
M00882_2.00
Arabidopsis thaliana
NNNAMCDAMY

RKTHGKTNNN
PBM
Franco-Zorrilla et al.(2014)
MYB111
0.697 0.720
Q2TCH0_PETHY
M11072_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PH4_01
0.685 0.742
MYB49
M07140_2.00
Arabidopsis thaliana
HDBBYYACCWAMYWH

DWRKTWGGTRRVVHD
Dap-seq
OMalley et al.(2016)
MYB49_col_a
0.671 0.688
MYB49
M07141_2.00
Arabidopsis thaliana
NYYYACCTAMYWHN

NDWRKTAGGTRRRN
Dap-seq
OMalley et al.(2016)
MYB49_colamp_a
0.671 0.688
MYB108
M07065_2.00
Arabidopsis thaliana
RCCWAAYYNNNNHNH

DNDNNNNRRTTWGGY
Dap-seq
OMalley et al.(2016)
BOS1_col_a
0.670 0.656
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EMJ04331 Myb 14 61
EMJ04331 Myb 67 112

Links

Other Myb/SANT family TFs
Other Prunus persica TFs

715 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
WUBG_17286 Wuchereria bancrofti WUBG_17286 N 0.000
OFLC_0001050101 Onchocerca flexuosa OFLC_0001050101 N 0.000
nOo.2.0.1.g05364 Onchocerca ochengi nOo.2.0.1.g05364 N 0.000
nLs.2.1.2.g07567 Litomosoides sigmodontis nLs.2.1.2.g07567 N 0.000
nDi.2.2.2.g07634 Dirofilaria immitis nDi.2.2.2.g07634 N 0.000
GPUH_0001628601 Gongylonema pulchrum GPUH_0001628601 N 0.000
ASU_02611 Ascaris suum ASU_02611 N 0.000
WBGene00246599 Onchocerca volvulus WBGene00246599 N 0.000
LOAG_08235 Loa loa LOAG_08235 N 0.000
TELCIR_12880 Teladorsagia circumcincta TELCIR_12880 N 0.000