CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb0088s002210
(
Sorghum bicolor
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Sb0088s002210
T279087_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb0088s002210.1
Myb
66
112
KGSWSPEEDALLTRLVEQHGAHRWSLISAAIPGRSGKSCRLRWCNQL
Sb0088s002210.1
Myb
118
163
HRPFTPHEDALILAAHSRYGNKWATIARLLPGRTDNSIKNHWNSNL
Links
Other
Myb/SANT
family TFs
Other
Sorghum bicolor
TFs
77 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM2G369799
Zea mays
GRMZM2G369799
I
0.855
Pavir.Cb00156
Panicum virgatum
Pavir.Cb00156
I
0.855
Pavir.Ca02945
Panicum virgatum
Pavir.Ca02945
I
0.855
Traes_4DL_D41CB81EA
Triticum aestivum
Traes_4DL_D41CB81EA
I
0.831
Traes_4AS_A79A68739
Triticum aestivum
Traes_4AS_A79A68739
N
0.831
Traes_4BL_545A5716E
Triticum aestivum
Traes_4BL_545A5716E
I
0.831
OPUNC01G44800
Oryza punctata
OPUNC01G44800
N
0.830
OGLUM01G50230
Oryza glumaepatula
OGLUM01G50230
N
0.826
OBART01G45880
Oryza barthii
OBART01G45880
N
0.826
OS01G0977300
Oryza sativa
OS01G0977300
N
0.826
ORUFI01G49370
Oryza rufipogon
ORUFI01G49370
N
0.826
ONIVA01G52120
Oryza nivara
ONIVA01G52120
N
0.826
ORGLA01G0396300
Oryza glaberrima
ORGLA01G0396300
N
0.826
BGIOSGA000003
Oryza indica
BGIOSGA000003
N
0.826
OB01G55080
Oryza brachyantha
OB01G55080
N
0.819
OLONG_011153
Oryza longistaminata
OLONG_011153
N
0.803
Si022959m.g
Setaria italica
Si022959m.g
I
0.783
LPERR01G40230
Leersia perrieri
LPERR01G40230
I
0.770
AMTR_s00007p00169630
Amborella trichopoda
AMTR_s00007p00169630
I
0.736
Lus10028979.g
Linum usitatissimum
Lus10028979.g
I
0.707
Lus10040940.g
Linum usitatissimum
Lus10040940.g
I
0.707
Cucsa.368410
Cucumis sativus
Cucsa.368410
I
0.699
29801.m003096
Ricinus communis
29801.m003096
I
0.697
GLYMA14G06870
Glycine max
GLYMA14G06870
I
0.694
GLYMA14G06320
Glycine max
GLYMA14G06320
I
0.692
Ciclev10029124m.g
Citrus clementina
Ciclev10029124m.g
I
0.688
orange1.1g040502m.g
Citrus sinensis
orange1.1g040502m.g
I
0.688
cassava41257.m1
Manihot esculenta
cassava41257.m1
I
0.687
29814.m000736
Ricinus communis
29814.m000736
I
0.687
POPTR_0008s07100
Populus trichocarpa
POPTR_0008s07100
I
0.687
SapurV1A.0650s0070
Salix purpurea
SapurV1A.0650s0070
I
0.687
Traes_5BL_486D0D865
Triticum aestivum
Traes_5BL_486D0D865
I
0.682
ONIVA09G00250
Oryza nivara
ONIVA09G00250
I
0.682
Traes_5DL_92CBBE968
Triticum aestivum
Traes_5DL_92CBBE968
I
0.682
ORGLA09G0002900
Oryza glaberrima
ORGLA09G0002900
I
0.682
OMERI08G05160
Oryza meridionalis
OMERI08G05160
I
0.682
MLOC_64817
Hordeum vulgare
MLOC_64817
I
0.682
OB09G10200
Oryza brachyantha
OB09G10200
I
0.682
OBART09G00310
Oryza barthii
OBART09G00310
I
0.682
OGLUM09G00340
Oryza glumaepatula
OGLUM09G00340
I
0.682
Pavir.Ba03084
Panicum virgatum
Pavir.Ba03084
I
0.682
BGIOSGA030245
Oryza indica
BGIOSGA030245
I
0.682
LPERR09G00910
Leersia perrieri
LPERR09G00910
I
0.682
OS09G0106700
Oryza sativa
OS09G0106700
I
0.682
ORUFI09G00360
Oryza rufipogon
ORUFI09G00360
I
0.682
Sb02g013010
Sorghum bicolor
Sb02g013010
I
0.682
Si032789m.g
Setaria italica
Si032789m.g
I
0.682
OPUNC12G06260
Oryza punctata
OPUNC12G06260
I
0.682
SapurV1A.0525s0230
Salix purpurea
SapurV1A.0525s0230
I
0.680
gene20888-v1.0-hybrid
Fragaria vesca
gene20888-v1.0-hybrid
I
0.680
cassava8939.m1
Manihot esculenta
cassava8939.m1
I
0.679
POPTR_0007s10490
Populus trichocarpa
POPTR_0007s10490
I
0.679
GRMZM2G087955
Zea mays
GRMZM2G087955
I
0.677
Eucgr.E02958
Eucalyptus grandis
Eucgr.E02958
I
0.673
Lus10007503.g
Linum usitatissimum
Lus10007503.g
I
0.673
chr2.LjT13M01.180.nd
Lotus japonicus
chr2.LjT13M01.180.nd
I
0.672
GLYMA02G43280
Glycine max
GLYMA02G43280
I
0.672
Pavir.J23512
Panicum virgatum
Pavir.J23512
I
0.670
Si017917m.g
Setaria italica
Si017917m.g
I
0.670
Cla004431
Citrullus lanatus
Cla004431
I
0.670
Sb04g005940
Sorghum bicolor
Sb04g005940
I
0.670
LPERR02G05810
Leersia perrieri
LPERR02G05810
I
0.670
GRMZM2G145444
Zea mays
GRMZM2G145444
I
0.670
Gorai.012G078200
Gossypium raimondii
Gorai.012G078200
I
0.670
orange1.1g046570m.g
Citrus sinensis
orange1.1g046570m.g
I
0.669
Ciclev10032317m.g
Citrus clementina
Ciclev10032317m.g
I
0.669
chr2.CM0002.110.nc
Lotus japonicus
chr2.CM0002.110.nc
I
0.668
TCM_042474
Theobroma cacao
TCM_042474
I
0.668
orange1.1g012494m.g
Citrus sinensis
orange1.1g012494m.g
I
0.668
Ciclev10031463m.g
Citrus clementina
Ciclev10031463m.g
I
0.668
MDP0000298689
Malus domestica
MDP0000298689
I
0.668
BRADI4G08220
Brachypodium distachyon
BRADI4G08220
I
0.665
GRMZM2G050550
Zea mays
GRMZM2G050550
I
0.665
SapurV1A.0709s0060
Salix purpurea
SapurV1A.0709s0060
I
0.664
MTR_5g082910
Medicago truncatula
MTR_5g082910
I
0.662
PK16550.1
Cannabis sativa
PK16550.1
I
0.662
Pavir.Ab00649
Panicum virgatum
Pavir.Ab00649
I
0.661