CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Sb03g003150
(
Sorghum bicolor
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Sb03g003150
T279163_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT3G16350
M01078_2.00
Arabidopsis thaliana
NYTATCYDNN
NNHRGATARN
PBM
Sullivan et al.(2014)
pTH7149
0.694
0.756
fgenesh1_pg.scaffold_70000111
M02342_2.00
Physcomitrella patens
NNHNATCBN
NVGATNDNN
PBM
Weirauch et al.(2014)
pTH8492
0.692
0.756
PK23829.1
M02355_2.00
Cannabis sativa
VTTATCCD
HGGATAAB
PBM
Weirauch et al.(2014)
pTH9592
0.685
0.756
PK29550.1
M02358_2.00
Cannabis sativa
NNHDATCYNN
NNRGATHDNN
PBM
Weirauch et al.(2014)
pTH9595
0.684
0.732
PK17526.1
M02353_2.00
Cannabis sativa
NNTTATCCAN
NTGGATAANN
PBM
Weirauch et al.(2014)
pTH9588
0.674
0.732
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb03g003150.1
Myb
20
61
NLKRLFLMGLKKYGRGDWRNISRNFVTSWTPTQVASHAQKYF
Links
Other
Myb/SANT
family TFs
Other
Sorghum bicolor
TFs
196 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MLOC_52982
Hordeum vulgare
MLOC_52982
I
0.852
OB05G25980
Oryza brachyantha
OB05G25980
I
0.833
Traes_1AL_1360F98E7
Triticum aestivum
Traes_1AL_1360F98E7
N
0.789
Pavir.J01328
Panicum virgatum
Pavir.J01328
I
0.785
Traes_3DS_DF23FE973
Triticum aestivum
Traes_3DS_DF23FE973
I
0.781
F775_18928
Aegilops tauschii
F775_18928
I
0.781
OB01G46940
Oryza brachyantha
OB01G46940
N
0.780
F775_08891
Aegilops tauschii
F775_08891
I
0.779
OBART05G18640
Oryza barthii
OBART05G18640
I
0.775
mgf026007m
Mimulus guttatus
mgf026007m
I
0.775
Traes_1BL_1B12D7856
Triticum aestivum
Traes_1BL_1B12D7856
I
0.773
Traes_1AL_01E24503F
Triticum aestivum
Traes_1AL_01E24503F
I
0.773
cassava4263.m1
Manihot esculenta
cassava4263.m1
I
0.761
MTR_1g033620
Medicago truncatula
MTR_1g033620
I
0.761
Pavir.J38363
Panicum virgatum
Pavir.J38363
I
0.756
Pavir.J35324
Panicum virgatum
Pavir.J35324
I
0.756
Sb09g030390
Sorghum bicolor
Sb09g030390
I
0.756
Si022624m.g
Setaria italica
Si022624m.g
I
0.756
Solyc02g082380.1
Solanum lycopersicum
Solyc02g082380.1
I
0.755
TRIUR3_09932
Triticum urartu
TRIUR3_09932
I
0.745
OBART04G08050
Oryza barthii
OBART04G08050
I
0.741
VIT_04s0008g00900
Vitis vinifera
VIT_04s0008g00900
I
0.732
PGSC0003DMG400020344
Solanum tuberosum
PGSC0003DMG400020344
I
0.730
OLONG_027538
Oryza longistaminata
OLONG_027538
I
0.725
Traes_2AL_C13CD3ECB
Triticum aestivum
Traes_2AL_C13CD3ECB
I
0.725
Solyc12g044610.1
Solanum lycopersicum
Solyc12g044610.1
I
0.725
PGSC0003DMG400026442
Solanum tuberosum
PGSC0003DMG400026442
I
0.725
ORGLA03G0402100
Oryza glaberrima
ORGLA03G0402100
I
0.725
TRIUR3_30912
Triticum urartu
TRIUR3_30912
I
0.725
Traes_7DS_C6BEE3896
Triticum aestivum
Traes_7DS_C6BEE3896
I
0.725
orange1.1g038601m.g
Citrus sinensis
orange1.1g038601m.g
I
0.724
Ciclev10009011m.g
Citrus clementina
Ciclev10009011m.g
I
0.724
Traes_3AL_891566958
Triticum aestivum
Traes_3AL_891566958
I
0.724
OB01G15640
Oryza brachyantha
OB01G15640
I
0.723
GRMZM2G176568
Zea mays
GRMZM2G176568
I
0.721
MDP0000233793
Malus domestica
MDP0000233793
I
0.720
LjSGA_030087.1
Lotus japonicus
LjSGA_030087.1
I
0.715
Cucsa.397260
Cucumis sativus
Cucsa.397260
I
0.715
Sb09g006060
Sorghum bicolor
Sb09g006060
I
0.714
Gorai.008G147400
Gossypium raimondii
Gorai.008G147400
I
0.714
Cucsa.285620
Cucumis sativus
Cucsa.285620
I
0.714
Gorai.008G233500
Gossypium raimondii
Gorai.008G233500
I
0.713
mgf017789m
Mimulus guttatus
mgf017789m
I
0.712
BGIOSGA015321
Oryza indica
BGIOSGA015321
I
0.710
ONIVA04G06580
Oryza nivara
ONIVA04G06580
I
0.710
OMERI01G05960
Oryza meridionalis
OMERI01G05960
I
0.707
evm.TU.supercontig_2092.1
Carica papaya
evm.TU.supercontig_2092.1
I
0.705
BRADI2G05590
Brachypodium distachyon
BRADI2G05590
I
0.705
MLOC_76271
Hordeum vulgare
MLOC_76271
I
0.705
MDP0000136727
Malus domestica
MDP0000136727
I
0.703
TRAES3BF110700030CFD_g
Triticum aestivum
TRAES3BF110700030CFD_g
I
0.703
GSMUA_Achr9G05930_001
Musa acuminata
GSMUA_Achr9G05930_001
I
0.703
SapurV1A.1882s0030
Salix purpurea
SapurV1A.1882s0030
I
0.701
TRIUR3_18966
Triticum urartu
TRIUR3_18966
I
0.701
Gorai.004G196500
Gossypium raimondii
Gorai.004G196500
I
0.697
GLYMA05G36290
Glycine max
GLYMA05G36290
I
0.696
Pavir.Eb00103
Panicum virgatum
Pavir.Eb00103
I
0.696
PGSC0003DMG400024572
Solanum tuberosum
PGSC0003DMG400024572
I
0.695
Sb03g006450
Sorghum bicolor
Sb03g006450
I
0.695
evm.TU.supercontig_35.12
Carica papaya
evm.TU.supercontig_35.12
I
0.695
Lus10004248.g
Linum usitatissimum
Lus10004248.g
I
0.695
fgenesh2_kg.3__1788__AT3G16350.1
Arabidopsis lyrata
fgenesh2_kg.3__1788__AT3G16350.1
I
0.694
Bra027170
Brassica rapa
Bra027170
I
0.694
Cagra.6624s0006
Capsella grandiflora
Cagra.6624s0006
I
0.694
PDK_20s1665441g001
Phoenix dactylifera
PDK_20s1665441g001
N
0.694
Thhalv10020915m.g
Eutrema salsugineum
Thhalv10020915m.g
I
0.694
Carubv10013924m.g
Capsella rubella
Carubv10013924m.g
I
0.694
AT3G16350
Arabidopsis thaliana
AT3G16350
D
0.694
Bostr.28625s0055
Boechera stricta
Bostr.28625s0055
I
0.694
POPTR_0001s22660
Populus trichocarpa
POPTR_0001s22660
I
0.694
Bo5g126180
Brassica oleracea
Bo5g126180
I
0.694
Gorai.009G137300
Gossypium raimondii
Gorai.009G137300
I
0.693
Ca_02786
Cicer arietinum
Ca_02786
I
0.693
MTR_2g100930
Medicago truncatula
MTR_2g100930
I
0.693
TCM_028884
Theobroma cacao
TCM_028884
I
0.693
GLYMA15G02250
Glycine max
GLYMA15G02250
I
0.693
GLYMA13G43120
Glycine max
GLYMA13G43120
I
0.693
Aquca_001_00262
Aquilegia coerulea
Aquca_001_00262
I
0.693
Aquca_002_00384
Aquilegia coerulea
Aquca_002_00384
I
0.692
cassava22868.valid.m1
Manihot esculenta
cassava22868.valid.m1
I
0.692
MLOC_79329
Hordeum vulgare
MLOC_79329
I
0.692
Lus10013289.g
Linum usitatissimum
Lus10013289.g
I
0.692
Bostr.10273s0355
Boechera stricta
Bostr.10273s0355
I
0.692
Pm006358
Prunus mume
Pm006358
I
0.692
AMTR_s00074p00097250
Amborella trichopoda
AMTR_s00074p00097250
I
0.692
VIT_01s0026g01050
Vitis vinifera
VIT_01s0026g01050
I
0.692
29736.m002089
Ricinus communis
29736.m002089
I
0.692
Cla000916
Citrullus lanatus
Cla000916
I
0.692
Eucgr.B02575
Eucalyptus grandis
Eucgr.B02575
I
0.692
GLYMA01G04530
Glycine max
GLYMA01G04530
I
0.692
orange1.1g021351m.g
Citrus sinensis
orange1.1g021351m.g
I
0.692
fgenesh1_pg.scaffold_66000048
Physcomitrella patens
fgenesh1_pg.scaffold_66000048
I
0.692
gene00738-v1.0-hybrid
Fragaria vesca
gene00738-v1.0-hybrid
I
0.692
Thhalv10019007m.g
Eutrema salsugineum
Thhalv10019007m.g
I
0.692
GLYMA02G03020
Glycine max
GLYMA02G03020
I
0.692
fgenesh1_pg.scaffold_70000111
Physcomitrella patens
fgenesh1_pg.scaffold_70000111
D
0.692
AT1G70000
Arabidopsis thaliana
AT1G70000
I
0.692
PRUPE_ppa008539mg
Prunus persica
PRUPE_ppa008539mg
I
0.692
TCM_010118
Theobroma cacao
TCM_010118
I
0.692
Eucgr.K02897
Eucalyptus grandis
Eucgr.K02897
I
0.692
Ciclev10032167m.g
Citrus clementina
Ciclev10032167m.g
I
0.692
Cucsa.361050
Cucumis sativus
Cucsa.361050
I
0.692
fgenesh1_pg.scaffold_66000046
Physcomitrella patens
fgenesh1_pg.scaffold_66000046
I
0.692
estExt_fgenesh1_pg.C_1880060
Physcomitrella patens
estExt_fgenesh1_pg.C_1880060
I
0.692
fgenesh2_kg.2__1257__AT1G70000.1
Arabidopsis lyrata
fgenesh2_kg.2__1257__AT1G70000.1
I
0.692
PGSC0003DMG400027126
Solanum tuberosum
PGSC0003DMG400027126
I
0.689
SapurV1A.0002s0030
Salix purpurea
SapurV1A.0002s0030
I
0.686
GLYMA04G34720
Glycine max
GLYMA04G34720
I
0.686
POPTR_0001s19070
Populus trichocarpa
POPTR_0001s19070
I
0.686
SapurV1A.0408s0140
Salix purpurea
SapurV1A.0408s0140
I
0.686
MTR_4g107230
Medicago truncatula
MTR_4g107230
I
0.686
GLYMA06G19960
Glycine max
GLYMA06G19960
I
0.686
estExt_fgenesh1_pg.C_60110
Micromonas pusilla
estExt_fgenesh1_pg.C_60110
I
0.685
TRAES3BF186800050CFD_g
Triticum aestivum
TRAES3BF186800050CFD_g
I
0.685
TRIUR3_12855
Triticum urartu
TRIUR3_12855
I
0.685
PK23829.1
Cannabis sativa
PK23829.1
D
0.685
F775_11223
Aegilops tauschii
F775_11223
I
0.685
EuGene.0300010169
Micromonas sp RCC299
EuGene.0300010169
I
0.685
Traes_3AS_965E2F790
Triticum aestivum
Traes_3AS_965E2F790
I
0.685
PGSC0003DMG400020730
Solanum tuberosum
PGSC0003DMG400020730
I
0.685
Traes_3DS_61692C8F3
Triticum aestivum
Traes_3DS_61692C8F3
I
0.685
Eucgr.J02939
Eucalyptus grandis
Eucgr.J02939
I
0.684
mgf012785m
Mimulus guttatus
mgf012785m
I
0.684
Ciclev10025950m.g
Citrus clementina
Ciclev10025950m.g
I
0.684
Eucgr.B00377
Eucalyptus grandis
Eucgr.B00377
I
0.684
Lus10037560.g
Linum usitatissimum
Lus10037560.g
I
0.684
PK29550.1
Cannabis sativa
PK29550.1
D
0.684
30146.m003509
Ricinus communis
30146.m003509
I
0.684
Lus10025822.g
Linum usitatissimum
Lus10025822.g
I
0.684
Lus10038279.g
Linum usitatissimum
Lus10038279.g
I
0.684
Lus10006826.g
Linum usitatissimum
Lus10006826.g
I
0.684
cassava22335.valid.m1
Manihot esculenta
cassava22335.valid.m1
I
0.684
cassava31470.valid.m1
Manihot esculenta
cassava31470.valid.m1
I
0.684
gw1.89.65.1
Physcomitrella patens
gw1.89.65.1
I
0.684
orange1.1g016477m.g
Citrus sinensis
orange1.1g016477m.g
I
0.684
Gorai.011G279700
Gossypium raimondii
Gorai.011G279700
I
0.683
Carubv10020813m.g
Capsella rubella
Carubv10020813m.g
I
0.682
Cagra.10840s0008
Capsella grandiflora
Cagra.10840s0008
I
0.682
e_gw1.89.66.1
Physcomitrella patens
e_gw1.89.66.1
I
0.682
PGSC0003DMG400009570
Solanum tuberosum
PGSC0003DMG400009570
I
0.680
Aquca_004_00370
Aquilegia coerulea
Aquca_004_00370
I
0.675
Lus10036652.g
Linum usitatissimum
Lus10036652.g
I
0.674
orange1.1g022562m.g
Citrus sinensis
orange1.1g022562m.g
I
0.674
SapurV1A.0113s0280
Salix purpurea
SapurV1A.0113s0280
I
0.674
SapurV1A.0007s0060
Salix purpurea
SapurV1A.0007s0060
I
0.674
MDP0000938309
Malus domestica
MDP0000938309
I
0.674
MDP0000758053
Malus domestica
MDP0000758053
I
0.674
MDP0000230601
Malus domestica
MDP0000230601
I
0.674
Gorai.007G034000
Gossypium raimondii
Gorai.007G034000
I
0.674
PK17526.1
Cannabis sativa
PK17526.1
D
0.674
chr2.CM0028.230.nd
Lotus japonicus
chr2.CM0028.230.nd
I
0.674
cassava17572.valid.m1
Manihot esculenta
cassava17572.valid.m1
I
0.674
TCM_013524
Theobroma cacao
TCM_013524
I
0.674
Solyc06g071230.2
Solanum lycopersicum
Solyc06g071230.2
I
0.674
Traes_3AS_6626D4A69
Triticum aestivum
Traes_3AS_6626D4A69
I
0.674
Traes_3DS_8AF1A10AB
Triticum aestivum
Traes_3DS_8AF1A10AB
I
0.674
VIT_17s0000g07510
Vitis vinifera
VIT_17s0000g07510
I
0.674
Solyc04g005100.2
Solanum lycopersicum
Solyc04g005100.2
I
0.674
PRUPE_ppa009283mg
Prunus persica
PRUPE_ppa009283mg
I
0.674
PGSC0003DMG400001913
Solanum tuberosum
PGSC0003DMG400001913
I
0.674
MLOC_20277
Hordeum vulgare
MLOC_20277
I
0.674
PGSC0003DMG400033030
Solanum tuberosum
PGSC0003DMG400033030
I
0.674
POPTR_0008s19610
Populus trichocarpa
POPTR_0008s19610
I
0.674
POPTR_0010s04860
Populus trichocarpa
POPTR_0010s04860
I
0.674
Ca_17597
Cicer arietinum
Ca_17597
I
0.674
Solyc03g113620.2
Solanum lycopersicum
Solyc03g113620.2
I
0.674
cassava23011.valid.m1
Manihot esculenta
cassava23011.valid.m1
I
0.674
Cucsa.098110
Cucumis sativus
Cucsa.098110
I
0.674
evm.TU.supercontig_5.314
Carica papaya
evm.TU.supercontig_5.314
I
0.674
cassava23010.valid.m1
Manihot esculenta
cassava23010.valid.m1
I
0.674
Ciclev10021454m.g
Citrus clementina
Ciclev10021454m.g
I
0.674
GSMUA_Achr1G01650_001
Musa acuminata
GSMUA_Achr1G01650_001
I
0.674
Pm024648
Prunus mume
Pm024648
I
0.674
30147.m014028
Ricinus communis
30147.m014028
I
0.674
BRADI2G42870
Brachypodium distachyon
BRADI2G42870
I
0.669
SELMODRAFT_84280
Selaginella moellendorffii
SELMODRAFT_84280
I
0.668
OB05G35300
Oryza brachyantha
OB05G35300
I
0.667
OPUNC05G25400
Oryza punctata
OPUNC05G25400
I
0.667
OPUNC05G25370
Oryza punctata
OPUNC05G25370
I
0.667
OMERI05G23670
Oryza meridionalis
OMERI05G23670
I
0.667
OBART05G27750
Oryza barthii
OBART05G27750
I
0.667
OGLUM05G29240
Oryza glumaepatula
OGLUM05G29240
I
0.667
ORGLA05G0241200
Oryza glaberrima
ORGLA05G0241200
I
0.667
ONIVA05G29740
Oryza nivara
ONIVA05G29740
I
0.667
ORUFI05G29720
Oryza rufipogon
ORUFI05G29720
I
0.667
BGIOSGA017461
Oryza indica
BGIOSGA017461
I
0.667
Cla010296
Citrullus lanatus
Cla010296
I
0.667
OS05G0589400
Oryza sativa
OS05G0589400
I
0.667
Gorai.003G175300
Gossypium raimondii
Gorai.003G175300
I
0.666
SELMODRAFT_445372
Selaginella moellendorffii
SELMODRAFT_445372
I
0.666
SELMODRAFT_439294
Selaginella moellendorffii
SELMODRAFT_439294
I
0.666
PDK_20s1532501g001
Phoenix dactylifera
PDK_20s1532501g001
I
0.665
SapurV1A.1685s0020
Salix purpurea
SapurV1A.1685s0020
I
0.665
mgf003276m
Mimulus guttatus
mgf003276m
I
0.664
gene09510-v1.0-hybrid
Fragaria vesca
gene09510-v1.0-hybrid
I
0.664
LjSGA_014616.1
Lotus japonicus
LjSGA_014616.1
I
0.664