Sb03g003150 (Sorghum bicolor)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Sb03g003150 T279163_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT3G16350
M01078_2.00
Arabidopsis thaliana
NYTATCYDNN

NNHRGATARN
PBM
Sullivan et al.(2014)
pTH7149
0.694 0.756
fgenesh1_pg.scaffold_70000111
M02342_2.00
Physcomitrella patens
NNHNATCBN

NVGATNDNN
PBM
Weirauch et al.(2014)
pTH8492
0.692 0.756
PK23829.1
M02355_2.00
Cannabis sativa
VTTATCCD

HGGATAAB
PBM
Weirauch et al.(2014)
pTH9592
0.685 0.756
PK29550.1
M02358_2.00
Cannabis sativa
NNHDATCYNN

NNRGATHDNN
PBM
Weirauch et al.(2014)
pTH9595
0.684 0.732
PK17526.1
M02353_2.00
Cannabis sativa
NNTTATCCAN

NTGGATAANN
PBM
Weirauch et al.(2014)
pTH9588
0.674 0.732
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb03g003150.1 Myb 20 61

Links

Other Myb/SANT family TFs
Other Sorghum bicolor TFs

196 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PK23829.1 Cannabis sativa PK23829.1 D 0.685
PK17526.1 Cannabis sativa PK17526.1 D 0.674
PK29550.1 Cannabis sativa PK29550.1 D 0.684
fgenesh1_pg.scaffold_70000111 Physcomitrella patens fgenesh1_pg.scaffold_70000111 D 0.692
AT3G16350 Arabidopsis thaliana AT3G16350 D 0.694
gw1.89.65.1 Physcomitrella patens gw1.89.65.1 I 0.684
Aquca_004_00370 Aquilegia coerulea Aquca_004_00370 I 0.675
Aquca_002_00384 Aquilegia coerulea Aquca_002_00384 I 0.692
Aquca_001_00262 Aquilegia coerulea Aquca_001_00262 I 0.693
mgf026007m Mimulus guttatus mgf026007m I 0.775
mgf017789m Mimulus guttatus mgf017789m I 0.712
mgf012785m Mimulus guttatus mgf012785m I 0.684
fgenesh1_pg.scaffold_66000048 Physcomitrella patens fgenesh1_pg.scaffold_66000048 I 0.692
mgf003276m Mimulus guttatus mgf003276m I 0.664
Bostr.10273s0355 Boechera stricta Bostr.10273s0355 I 0.692
Bostr.28625s0055 Boechera stricta Bostr.28625s0055 I 0.694
Eucgr.B02575 Eucalyptus grandis Eucgr.B02575 I 0.692
Eucgr.B00377 Eucalyptus grandis Eucgr.B00377 I 0.684
Ciclev10032167m.g Citrus clementina Ciclev10032167m.g I 0.692
Ciclev10025950m.g Citrus clementina Ciclev10025950m.g I 0.684
Ciclev10021454m.g Citrus clementina Ciclev10021454m.g I 0.674
Ciclev10009011m.g Citrus clementina Ciclev10009011m.g I 0.724
Carubv10020813m.g Capsella rubella Carubv10020813m.g I 0.682
Carubv10013924m.g Capsella rubella Carubv10013924m.g I 0.694
Cagra.6624s0006 Capsella grandiflora Cagra.6624s0006 I 0.694
Cagra.10840s0008 Capsella grandiflora Cagra.10840s0008 I 0.682
fgenesh1_pg.scaffold_66000046 Physcomitrella patens fgenesh1_pg.scaffold_66000046 I 0.692
estExt_fgenesh1_pg.C_60110 Micromonas pusilla estExt_fgenesh1_pg.C_60110 I 0.685
estExt_fgenesh1_pg.C_1880060 Physcomitrella patens estExt_fgenesh1_pg.C_1880060 I 0.692
30147.m014028 Ricinus communis 30147.m014028 I 0.674
30146.m003509 Ricinus communis 30146.m003509 I 0.684
29736.m002089 Ricinus communis 29736.m002089 I 0.692
Pm024648 Prunus mume Pm024648 I 0.674
Pm006358 Prunus mume Pm006358 I 0.692
Cla010296 Citrullus lanatus Cla010296 I 0.667
VIT_17s0000g07510 Vitis vinifera VIT_17s0000g07510 I 0.674
Cla000916 Citrullus lanatus Cla000916 I 0.692
Ca_17597 Cicer arietinum Ca_17597 I 0.674
cassava17572.valid.m1 Manihot esculenta cassava17572.valid.m1 I 0.674
cassava22335.valid.m1 Manihot esculenta cassava22335.valid.m1 I 0.684
cassava22868.valid.m1 Manihot esculenta cassava22868.valid.m1 I 0.692
e_gw1.89.66.1 Physcomitrella patens e_gw1.89.66.1 I 0.682
Cucsa.397260 Cucumis sativus Cucsa.397260 I 0.715
Cucsa.361050 Cucumis sativus Cucsa.361050 I 0.692
Cucsa.285620 Cucumis sativus Cucsa.285620 I 0.714
Cucsa.098110 Cucumis sativus Cucsa.098110 I 0.674
cassava4263.m1 Manihot esculenta cassava4263.m1 I 0.761
cassava31470.valid.m1 Manihot esculenta cassava31470.valid.m1 I 0.684
cassava23011.valid.m1 Manihot esculenta cassava23011.valid.m1 I 0.674
cassava23010.valid.m1 Manihot esculenta cassava23010.valid.m1 I 0.674
Ca_02786 Cicer arietinum Ca_02786 I 0.693
PDK_20s1532501g001 Phoenix dactylifera PDK_20s1532501g001 I 0.665
Pavir.J35324 Panicum virgatum Pavir.J35324 I 0.756
Pavir.J01328 Panicum virgatum Pavir.J01328 I 0.785
Pavir.Eb00103 Panicum virgatum Pavir.Eb00103 I 0.696
orange1.1g038601m.g Citrus sinensis orange1.1g038601m.g I 0.724
orange1.1g022562m.g Citrus sinensis orange1.1g022562m.g I 0.674
orange1.1g021351m.g Citrus sinensis orange1.1g021351m.g I 0.692
orange1.1g016477m.g Citrus sinensis orange1.1g016477m.g I 0.684
MDP0000938309 Malus domestica MDP0000938309 I 0.674
MDP0000758053 Malus domestica MDP0000758053 I 0.674
Pavir.J38363 Panicum virgatum Pavir.J38363 I 0.756
SapurV1A.0002s0030 Salix purpurea SapurV1A.0002s0030 I 0.686
SapurV1A.0007s0060 Salix purpurea SapurV1A.0007s0060 I 0.674
LjSGA_030087.1 Lotus japonicus LjSGA_030087.1 I 0.715
LjSGA_014616.1 Lotus japonicus LjSGA_014616.1 I 0.664
chr2.CM0028.230.nd Lotus japonicus chr2.CM0028.230.nd I 0.674
Thhalv10020915m.g Eutrema salsugineum Thhalv10020915m.g I 0.694
Thhalv10019007m.g Eutrema salsugineum Thhalv10019007m.g I 0.692
SapurV1A.1882s0030 Salix purpurea SapurV1A.1882s0030 I 0.701
SapurV1A.1685s0020 Salix purpurea SapurV1A.1685s0020 I 0.665
SapurV1A.0408s0140 Salix purpurea SapurV1A.0408s0140 I 0.686
SapurV1A.0113s0280 Salix purpurea SapurV1A.0113s0280 I 0.674
MDP0000233793 Malus domestica MDP0000233793 I 0.720
MDP0000230601 Malus domestica MDP0000230601 I 0.674
MDP0000136727 Malus domestica MDP0000136727 I 0.703
Gorai.004G196500 Gossypium raimondii Gorai.004G196500 I 0.697
Gorai.003G175300 Gossypium raimondii Gorai.003G175300 I 0.666
gene09510-v1.0-hybrid Fragaria vesca gene09510-v1.0-hybrid I 0.664
gene00738-v1.0-hybrid Fragaria vesca gene00738-v1.0-hybrid I 0.692
evm.TU.supercontig_5.314 Carica papaya evm.TU.supercontig_5.314 I 0.674
evm.TU.supercontig_35.12 Carica papaya evm.TU.supercontig_35.12 I 0.695
evm.TU.supercontig_2092.1 Carica papaya evm.TU.supercontig_2092.1 I 0.705
EuGene.0300010169 Micromonas sp RCC299 EuGene.0300010169 I 0.685
Eucgr.K02897 Eucalyptus grandis Eucgr.K02897 I 0.692
Gorai.007G034000 Gossypium raimondii Gorai.007G034000 I 0.674
Gorai.008G147400 Gossypium raimondii Gorai.008G147400 I 0.714
Gorai.008G233500 Gossypium raimondii Gorai.008G233500 I 0.713
Lus10038279.g Linum usitatissimum Lus10038279.g I 0.684
Lus10037560.g Linum usitatissimum Lus10037560.g I 0.684
Lus10036652.g Linum usitatissimum Lus10036652.g I 0.674
Lus10025822.g Linum usitatissimum Lus10025822.g I 0.684
Lus10013289.g Linum usitatissimum Lus10013289.g I 0.692
Lus10006826.g Linum usitatissimum Lus10006826.g I 0.684
Lus10004248.g Linum usitatissimum Lus10004248.g I 0.695
Gorai.011G279700 Gossypium raimondii Gorai.011G279700 I 0.683
Gorai.009G137300 Gossypium raimondii Gorai.009G137300 I 0.693
Eucgr.J02939 Eucalyptus grandis Eucgr.J02939 I 0.684
OS05G0589400 Oryza sativa OS05G0589400 I 0.667
OBART05G18640 Oryza barthii OBART05G18640 I 0.775
OBART04G08050 Oryza barthii OBART04G08050 I 0.741
OB05G35300 Oryza brachyantha OB05G35300 I 0.667
OB05G25980 Oryza brachyantha OB05G25980 I 0.833
OB01G15640 Oryza brachyantha OB01G15640 I 0.723
MTR_4g107230 Medicago truncatula MTR_4g107230 I 0.686
MTR_2g100930 Medicago truncatula MTR_2g100930 I 0.693
MTR_1g033620 Medicago truncatula MTR_1g033620 I 0.761
MLOC_79329 Hordeum vulgare MLOC_79329 I 0.692
MLOC_76271 Hordeum vulgare MLOC_76271 I 0.705
OBART05G27750 Oryza barthii OBART05G27750 I 0.667
OGLUM05G29240 Oryza glumaepatula OGLUM05G29240 I 0.667
ORUFI05G29720 Oryza rufipogon ORUFI05G29720 I 0.667
ORGLA05G0241200 Oryza glaberrima ORGLA05G0241200 I 0.667
ORGLA03G0402100 Oryza glaberrima ORGLA03G0402100 I 0.725
OPUNC05G25400 Oryza punctata OPUNC05G25400 I 0.667
OPUNC05G25370 Oryza punctata OPUNC05G25370 I 0.667
ONIVA05G29740 Oryza nivara ONIVA05G29740 I 0.667
ONIVA04G06580 Oryza nivara ONIVA04G06580 I 0.710
OMERI05G23670 Oryza meridionalis OMERI05G23670 I 0.667
OMERI01G05960 Oryza meridionalis OMERI01G05960 I 0.707
OLONG_027538 Oryza longistaminata OLONG_027538 I 0.725
MLOC_52982 Hordeum vulgare MLOC_52982 I 0.852
MLOC_20277 Hordeum vulgare MLOC_20277 I 0.674
F775_18928 Aegilops tauschii F775_18928 I 0.781
F775_11223 Aegilops tauschii F775_11223 I 0.685
F775_08891 Aegilops tauschii F775_08891 I 0.779
BRADI2G42870 Brachypodium distachyon BRADI2G42870 I 0.669
BRADI2G05590 Brachypodium distachyon BRADI2G05590 I 0.705
Bra027170 Brassica rapa Bra027170 I 0.694
Bo5g126180 Brassica oleracea Bo5g126180 I 0.694
BGIOSGA017461 Oryza indica BGIOSGA017461 I 0.667
BGIOSGA015321 Oryza indica BGIOSGA015321 I 0.710
AT1G70000 Arabidopsis thaliana AT1G70000 I 0.692
fgenesh2_kg.2__1257__AT1G70000.1 Arabidopsis lyrata fgenesh2_kg.2__1257__AT1G70000.1 I 0.692
fgenesh2_kg.3__1788__AT3G16350.1 Arabidopsis lyrata fgenesh2_kg.3__1788__AT3G16350.1 I 0.694
GSMUA_Achr9G05930_001 Musa acuminata GSMUA_Achr9G05930_001 I 0.703
GSMUA_Achr1G01650_001 Musa acuminata GSMUA_Achr1G01650_001 I 0.674
GRMZM2G176568 Zea mays GRMZM2G176568 I 0.721
GLYMA15G02250 Glycine max GLYMA15G02250 I 0.693
GLYMA13G43120 Glycine max GLYMA13G43120 I 0.693
GLYMA06G19960 Glycine max GLYMA06G19960 I 0.686
GLYMA05G36290 Glycine max GLYMA05G36290 I 0.696
GLYMA04G34720 Glycine max GLYMA04G34720 I 0.686
GLYMA02G03020 Glycine max GLYMA02G03020 I 0.692
GLYMA01G04530 Glycine max GLYMA01G04530 I 0.692
AMTR_s00074p00097250 Amborella trichopoda AMTR_s00074p00097250 I 0.692
VIT_04s0008g00900 Vitis vinifera VIT_04s0008g00900 I 0.732
Traes_3AS_6626D4A69 Triticum aestivum Traes_3AS_6626D4A69 I 0.674
Traes_3AL_891566958 Triticum aestivum Traes_3AL_891566958 I 0.724
Traes_2AL_C13CD3ECB Triticum aestivum Traes_2AL_C13CD3ECB I 0.725
Traes_1BL_1B12D7856 Triticum aestivum Traes_1BL_1B12D7856 I 0.773
Traes_1AL_01E24503F Triticum aestivum Traes_1AL_01E24503F I 0.773
TCM_028884 Theobroma cacao TCM_028884 I 0.693
TCM_013524 Theobroma cacao TCM_013524 I 0.674
TCM_010118 Theobroma cacao TCM_010118 I 0.692
Solyc12g044610.1 Solanum lycopersicum Solyc12g044610.1 I 0.725
Solyc06g071230.2 Solanum lycopersicum Solyc06g071230.2 I 0.674
Traes_3AS_965E2F790 Triticum aestivum Traes_3AS_965E2F790 I 0.685
TRAES3BF110700030CFD_g Triticum aestivum TRAES3BF110700030CFD_g I 0.703
VIT_01s0026g01050 Vitis vinifera VIT_01s0026g01050 I 0.692
TRIUR3_30912 Triticum urartu TRIUR3_30912 I 0.725
TRIUR3_18966 Triticum urartu TRIUR3_18966 I 0.701
TRIUR3_12855 Triticum urartu TRIUR3_12855 I 0.685
TRIUR3_09932 Triticum urartu TRIUR3_09932 I 0.745
Traes_7DS_C6BEE3896 Triticum aestivum Traes_7DS_C6BEE3896 I 0.725
Traes_3DS_DF23FE973 Triticum aestivum Traes_3DS_DF23FE973 I 0.781
Traes_3DS_8AF1A10AB Triticum aestivum Traes_3DS_8AF1A10AB I 0.674
Traes_3DS_61692C8F3 Triticum aestivum Traes_3DS_61692C8F3 I 0.685
TRAES3BF186800050CFD_g Triticum aestivum TRAES3BF186800050CFD_g I 0.685
Solyc04g005100.2 Solanum lycopersicum Solyc04g005100.2 I 0.674
Solyc03g113620.2 Solanum lycopersicum Solyc03g113620.2 I 0.674
POPTR_0008s19610 Populus trichocarpa POPTR_0008s19610 I 0.674
POPTR_0001s22660 Populus trichocarpa POPTR_0001s22660 I 0.694
POPTR_0001s19070 Populus trichocarpa POPTR_0001s19070 I 0.686
PGSC0003DMG400033030 Solanum tuberosum PGSC0003DMG400033030 I 0.674
PGSC0003DMG400027126 Solanum tuberosum PGSC0003DMG400027126 I 0.689
PGSC0003DMG400026442 Solanum tuberosum PGSC0003DMG400026442 I 0.725
PGSC0003DMG400024572 Solanum tuberosum PGSC0003DMG400024572 I 0.695
PGSC0003DMG400020730 Solanum tuberosum PGSC0003DMG400020730 I 0.685
PGSC0003DMG400020344 Solanum tuberosum PGSC0003DMG400020344 I 0.730
PGSC0003DMG400009570 Solanum tuberosum PGSC0003DMG400009570 I 0.680
PGSC0003DMG400001913 Solanum tuberosum PGSC0003DMG400001913 I 0.674
POPTR_0010s04860 Populus trichocarpa POPTR_0010s04860 I 0.674
PRUPE_ppa008539mg Prunus persica PRUPE_ppa008539mg I 0.692
SELMODRAFT_445372 Selaginella moellendorffii SELMODRAFT_445372 I 0.666
SELMODRAFT_439294 Selaginella moellendorffii SELMODRAFT_439294 I 0.666
Si022624m.g Setaria italica Si022624m.g I 0.756
Solyc02g082380.1 Solanum lycopersicum Solyc02g082380.1 I 0.755
Sb09g030390 Sorghum bicolor Sb09g030390 I 0.756
Sb09g006060 Sorghum bicolor Sb09g006060 I 0.714
Sb03g006450 Sorghum bicolor Sb03g006450 I 0.695
PRUPE_ppa009283mg Prunus persica PRUPE_ppa009283mg I 0.674
SELMODRAFT_84280 Selaginella moellendorffii SELMODRAFT_84280 I 0.668
OB01G46940 Oryza brachyantha OB01G46940 N 0.780
Traes_1AL_1360F98E7 Triticum aestivum Traes_1AL_1360F98E7 N 0.789
PDK_20s1665441g001 Phoenix dactylifera PDK_20s1665441g001 N 0.694