Sb03g004600 (Sorghum bicolor)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Sb03g004600 T279166_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB61
M07002_2.00
Arabidopsis thaliana
HNYAMCHACCDNHNH

DNDNHGGTDGKTRND
Dap-seq
OMalley et al.(2016)
MYB61_col_a
0.668 0.720
MYB61
M07003_2.00
Arabidopsis thaliana
NHNYACCWAMCDH

DHGKTWGGTRNDN
Dap-seq
OMalley et al.(2016)
MYB61_colamp_a
0.668 0.720
MYB55
M00876_2.00
Arabidopsis thaliana
ACCWAMCD

HGKTWGGT
PBM
Franco-Zorrilla et al.(2014)
MYB55
0.663 0.731
MYB55
M07102_2.00
Arabidopsis thaliana
HNNNHBYAMCWAMCD

HGKTWGKTRVDNNND
Dap-seq
OMalley et al.(2016)
MYB55_colamp_a
0.663 0.731
MYB55
M07103_2.00
Arabidopsis thaliana
NYNYAMCHACCRHH

DDYGGTDGKTRNRN
Dap-seq
OMalley et al.(2016)
MYB55_col
0.663 0.731
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb03g004600.1 Myb 16 63
Sb03g004600.1 Myb 69 114

Links

Other Myb/SANT family TFs
Other Sorghum bicolor TFs

266 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30147.m013885 Ricinus communis 30147.m013885 I 0.751
Aquca_003_00245 Aquilegia coerulea Aquca_003_00245 I 0.674
ATMYB86 Arabidopsis lyrata fgenesh2_kg.6__2630__AT5G26660.1 I 0.739
BGIOSGA000952 Oryza indica BGIOSGA000952 I 0.747
BGIOSGA001460 Oryza indica BGIOSGA001460 I 0.753
BGIOSGA001461 Oryza indica BGIOSGA001461 I 0.749
BGIOSGA001872 Oryza indica BGIOSGA001872 I 0.694
BGIOSGA002858 Oryza indica BGIOSGA002858 I 0.846
BGIOSGA010658 Oryza indica BGIOSGA010658 I 0.667
BGIOSGA019160 Oryza indica BGIOSGA019160 I 0.692
BGIOSGA020297 Oryza indica BGIOSGA020297 I 0.763
BGIOSGA026208 Oryza indica BGIOSGA026208 I 0.667
Bo2g156300 Brassica oleracea Bo2g156300 I 0.739
Bo7g095130 Brassica oleracea Bo7g095130 I 0.739
Bo8g111090 Brassica oleracea Bo8g111090 I 0.671
Bo9g004210 Brassica oleracea Bo9g004210 I 0.663
Bo9g010860 Brassica oleracea Bo9g010860 I 0.739
Bostr.25494s0012 Boechera stricta Bostr.25494s0012 I 0.668
Bostr.29827s0161 Boechera stricta Bostr.29827s0161 I 0.739
Bostr.4825s0008 Boechera stricta Bostr.4825s0008 I 0.663
Bra020016 Brassica rapa Bra020016 I 0.672
Bra020526 Brassica rapa Bra020526 I 0.719
Bra030783 Brassica rapa Bra030783 I 0.668
Bra031669 Brassica rapa Bra031669 I 0.671
Bra036317 Brassica rapa Bra036317 I 0.663
Bra036588 Brassica rapa Bra036588 I 0.739
BRADI2G11080 Brachypodium distachyon BRADI2G11080 I 0.689
BRADI2G17982 Brachypodium distachyon BRADI2G17982 I 0.749
BRADI2G36730 Brachypodium distachyon BRADI2G36730 I 0.697
BRADI2G40620 Brachypodium distachyon BRADI2G40620 I 0.745
BRADI2G47590 Brachypodium distachyon BRADI2G47590 I 0.747
Cagra.0334s0011 Capsella grandiflora Cagra.0334s0011 I 0.663
Cagra.23492s0001 Capsella grandiflora Cagra.23492s0001 I 0.739
Cagra.4395s0139 Capsella grandiflora Cagra.4395s0139 I 0.698
Carubv10001224m.g Capsella rubella Carubv10001224m.g I 0.739
Carubv10001308m.g Capsella rubella Carubv10001308m.g I 0.663
Carubv10009497m.g Capsella rubella Carubv10009497m.g I 0.698
cassava12868.valid.m1 Manihot esculenta cassava12868.valid.m1 I 0.662
cassava17679.valid.m1 Manihot esculenta cassava17679.valid.m1 I 0.662
cassava19716.m1 Manihot esculenta cassava19716.m1 I 0.747
cassava33008.m1 Manihot esculenta cassava33008.m1 I 0.684
cassava33965.m1 Manihot esculenta cassava33965.m1 I 0.751
Ca_01055 Cicer arietinum Ca_01055 I 0.684
Ca_03564 Cicer arietinum Ca_03564 I 0.684
Ca_03589 Cicer arietinum Ca_03589 I 0.672
Ca_07460 Cicer arietinum Ca_07460 I 0.673
Ca_08822 Cicer arietinum Ca_08822 I 0.746
chr1.CM0122.20.nc Lotus japonicus chr1.CM0122.20.nc I 0.680
chr4.CM0172.120.nc Lotus japonicus chr4.CM0172.120.nc I 0.763
chr5.CM0048.130.nc Lotus japonicus chr5.CM0048.130.nc I 0.687
chr5.CM0048.320.nd Lotus japonicus chr5.CM0048.320.nd I 0.684
Ciclev10020144m.g Citrus clementina Ciclev10020144m.g I 0.684
Ciclev10024338m.g Citrus clementina Ciclev10024338m.g I 0.747
Cla003497 Citrullus lanatus Cla003497 I 0.751
Cla005219 Citrullus lanatus Cla005219 I 0.671
Cla019513 Citrullus lanatus Cla019513 I 0.715
Cla020303 Citrullus lanatus Cla020303 I 0.671
Cucsa.051050 Cucumis sativus Cucsa.051050 I 0.671
Cucsa.090310 Cucumis sativus Cucsa.090310 I 0.671
Cucsa.098700 Cucumis sativus Cucsa.098700 I 0.751
Cucsa.196550 Cucumis sativus Cucsa.196550 I 0.715
Eucgr.A00996 Eucalyptus grandis Eucgr.A00996 I 0.723
Eucgr.B00229 Eucalyptus grandis Eucgr.B00229 I 0.748
Eucgr.B01827 Eucalyptus grandis Eucgr.B01827 I 0.662
Eucgr.B02197 Eucalyptus grandis Eucgr.B02197 I 0.688
Eucgr.H01337 Eucalyptus grandis Eucgr.H01337 I 0.666
Eucgr.K00555 Eucalyptus grandis Eucgr.K00555 I 0.681
Eucgr.K02806 Eucalyptus grandis Eucgr.K02806 I 0.722
evm.TU.supercontig_110.11 Carica papaya evm.TU.supercontig_110.11 I 0.751
evm.TU.supercontig_640.1 Carica papaya evm.TU.supercontig_640.1 I 0.674
F775_01821 Aegilops tauschii F775_01821 I 0.745
F775_11759 Aegilops tauschii F775_11759 N 0.675
F775_12496 Aegilops tauschii F775_12496 I 0.708
F775_15721 Aegilops tauschii F775_15721 I 0.747
F775_18488 Aegilops tauschii F775_18488 I 0.667
F775_27188 Aegilops tauschii F775_27188 N 0.699
F775_28584 Aegilops tauschii F775_28584 I 0.694
gene09845-v1.0-hybrid Fragaria vesca gene09845-v1.0-hybrid I 0.751
gene22961-v1.0-hybrid Fragaria vesca gene22961-v1.0-hybrid I 0.662
GLYMA02G00960 Glycine max GLYMA02G00960 I 0.684
GLYMA03G38410 Glycine max GLYMA03G38410 I 0.684
GLYMA04G36110 Glycine max GLYMA04G36110 I 0.742
GLYMA05G02550 Glycine max GLYMA05G02550 I 0.751
GLYMA06G18830 Glycine max GLYMA06G18830 I 0.742
GLYMA10G27940 Glycine max GLYMA10G27940 I 0.684
GLYMA10G28250 Glycine max GLYMA10G28250 I 0.666
GLYMA12G36630 Glycine max GLYMA12G36630 I 0.671
GLYMA13G27310 Glycine max GLYMA13G27310 I 0.662
GLYMA17G09310 Glycine max GLYMA17G09310 I 0.749
GLYMA19G41010 Glycine max GLYMA19G41010 I 0.684
Gorai.001G148500 Gossypium raimondii Gorai.001G148500 I 0.684
Gorai.004G147600 Gossypium raimondii Gorai.004G147600 I 0.684
Gorai.007G118200 Gossypium raimondii Gorai.007G118200 I 0.684
Gorai.008G133700 Gossypium raimondii Gorai.008G133700 I 0.693
GRMZM2G003406 Zea mays GRMZM2G003406 I 0.747
GRMZM2G017520 Zea mays GRMZM2G017520 I 0.677
GRMZM2G052377 Zea mays GRMZM2G052377 I 0.909
GRMZM2G064744 Zea mays GRMZM2G064744 I 0.745
GRMZM2G119693 Zea mays GRMZM2G119693 I 0.794
GRMZM2G127490 Zea mays GRMZM2G127490 I 0.692
GRMZM2G147698 Zea mays GRMZM2G147698 I 0.667
GRMZM2G171781 Zea mays GRMZM2G171781 I 0.692
GRMZM2G175232 Zea mays GRMZM2G175232 I 0.772
GSMUA_Achr11G00430_001 Musa acuminata GSMUA_Achr11G00430_001 I 0.679
GSMUA_Achr11G15910_001 Musa acuminata GSMUA_Achr11G15910_001 I 0.683
GSMUA_Achr1G18990_001 Musa acuminata GSMUA_Achr1G18990_001 I 0.728
GSMUA_Achr1G25120_001 Musa acuminata GSMUA_Achr1G25120_001 I 0.668
GSMUA_Achr2G01830_001 Musa acuminata GSMUA_Achr2G01830_001 I 0.727
GSMUA_Achr2G18440_001 Musa acuminata GSMUA_Achr2G18440_001 I 0.683
GSMUA_Achr3G12200_001 Musa acuminata GSMUA_Achr3G12200_001 I 0.719
GSMUA_Achr3G24580_001 Musa acuminata GSMUA_Achr3G24580_001 I 0.696
GSMUA_Achr3G28540_001 Musa acuminata GSMUA_Achr3G28540_001 I 0.720
GSMUA_Achr4G06410_001 Musa acuminata GSMUA_Achr4G06410_001 N 0.683
GSMUA_Achr4G19560_001 Musa acuminata GSMUA_Achr4G19560_001 I 0.693
GSMUA_Achr5G18400_001 Musa acuminata GSMUA_Achr5G18400_001 I 0.683
GSMUA_Achr7G17250_001 Musa acuminata GSMUA_Achr7G17250_001 I 0.680
GSMUA_Achr8G18730_001 Musa acuminata GSMUA_Achr8G18730_001 I 0.662
GSMUA_Achr9G22190_001 Musa acuminata GSMUA_Achr9G22190_001 I 0.736
GSMUA_AchrUn_randomG00040_001 Musa acuminata GSMUA_AchrUn_randomG00040_001 I 0.666
LPERR01G04110 Leersia perrieri LPERR01G04110 N 0.663
LPERR01G10930 Leersia perrieri LPERR01G10930 I 0.694
LPERR01G16340 Leersia perrieri LPERR01G16340 I 0.758
LPERR01G24020 Leersia perrieri LPERR01G24020 N 0.673
LPERR05G02400 Leersia perrieri LPERR05G02400 I 0.692
LPERR05G20350 Leersia perrieri LPERR05G20350 N 0.672
LPERR07G20400 Leersia perrieri LPERR07G20400 I 0.667
Lus10038022.g Linum usitatissimum Lus10038022.g I 0.684
MDP0000256645 Malus domestica MDP0000256645 I 0.739
MDP0000653903 Malus domestica MDP0000653903 I 0.662
MDP0000852549 Malus domestica MDP0000852549 I 0.718
mgf003709m Mimulus guttatus mgf003709m I 0.680
mgf019381m Mimulus guttatus mgf019381m I 0.674
mgf024107m Mimulus guttatus mgf024107m I 0.676
MLOC_37780 Hordeum vulgare MLOC_37780 I 0.667
MLOC_59663 Hordeum vulgare MLOC_59663 I 0.694
MLOC_6156 Hordeum vulgare MLOC_6156 I 0.745
MTR_1g085040 Medicago truncatula MTR_1g085040 I 0.672
MTR_1g085640 Medicago truncatula MTR_1g085640 I 0.681
MTR_1g112760 Medicago truncatula MTR_1g112760 I 0.721
MTR_3g077110 Medicago truncatula MTR_3g077110 I 0.734
MTR_4g105130 Medicago truncatula MTR_4g105130 I 0.763
MTR_7g110830 Medicago truncatula MTR_7g110830 I 0.684
MYB55 Arabidopsis thaliana AT4G01680 D 0.663
MYB55 Arabidopsis lyrata fgenesh2_kg.6__3543__AT4G01680.1 I 0.663
MYB61 Arabidopsis thaliana AT1G09540 D 0.668
MYB61 Arabidopsis lyrata scaffold_100991.1 I 0.668
MYB86 Arabidopsis thaliana AT5G26660 I 0.739
OB01G14200 Oryza brachyantha OB01G14200 N 0.674
OB01G14210 Oryza brachyantha OB01G14210 I 0.863
OB01G21720 Oryza brachyantha OB01G21720 I 0.694
OB01G28670 Oryza brachyantha OB01G28670 I 0.758
OB01G37060 Oryza brachyantha OB01G37060 I 0.747
OB05G12630 Oryza brachyantha OB05G12630 I 0.692
OB05G32030 Oryza brachyantha OB05G32030 I 0.772
OBART01G11910 Oryza barthii OBART01G11910 I 0.694
OBART01G18830 Oryza barthii OBART01G18830 I 0.749
OBART05G02690 Oryza barthii OBART05G02690 I 0.692
OGLUM01G13340 Oryza glumaepatula OGLUM01G13340 I 0.694
OGLUM01G22380 Oryza glumaepatula OGLUM01G22380 I 0.749
OGLUM05G02680 Oryza glumaepatula OGLUM05G02680 I 0.692
OGLUM07G23470 Oryza glumaepatula OGLUM07G23470 I 0.667
OLONG_008768 Oryza longistaminata OLONG_008768 I 0.692
OLONG_014417 Oryza longistaminata OLONG_014417 I 0.694
OMERI01G17650 Oryza meridionalis OMERI01G17650 I 0.749
OMERI03G17220 Oryza meridionalis OMERI03G17220 I 0.667
OMERI05G02610 Oryza meridionalis OMERI05G02610 I 0.692
OMERI05G21780 Oryza meridionalis OMERI05G21780 I 0.763
OMERI07G19830 Oryza meridionalis OMERI07G19830 I 0.667
ONIVA01G14120 Oryza nivara ONIVA01G14120 I 0.694
ONIVA01G21360 Oryza nivara ONIVA01G21360 I 0.749
ONIVA02G07540 Oryza nivara ONIVA02G07540 I 0.667
ONIVA05G02580 Oryza nivara ONIVA05G02580 I 0.692
OPUNC01G11600 Oryza punctata OPUNC01G11600 I 0.694
OPUNC01G19230 Oryza punctata OPUNC01G19230 I 0.739
OPUNC05G02540 Oryza punctata OPUNC05G02540 I 0.692
OPUNC07G22080 Oryza punctata OPUNC07G22080 I 0.667
orange1.1g013300m.g Citrus sinensis orange1.1g013300m.g I 0.684
orange1.1g016021m.g Citrus sinensis orange1.1g016021m.g I 0.747
ORGLA01G0040700 Oryza glaberrima ORGLA01G0040700 I 0.846
ORGLA01G0100400 Oryza glaberrima ORGLA01G0100400 I 0.694
ORGLA01G0154000 Oryza glaberrima ORGLA01G0154000 I 0.749
ORGLA01G0230000 Oryza glaberrima ORGLA01G0230000 I 0.747
ORGLA05G0025500 Oryza glaberrima ORGLA05G0025500 I 0.692
ORGLA05G0210500 Oryza glaberrima ORGLA05G0210500 I 0.763
ORGLA07G0264800 Oryza glaberrima ORGLA07G0264800 I 0.667
ORUFI01G04660 Oryza rufipogon ORUFI01G04660 I 0.846
ORUFI01G12800 Oryza rufipogon ORUFI01G12800 I 0.694
ORUFI01G21210 Oryza rufipogon ORUFI01G21210 I 0.753
ORUFI05G02790 Oryza rufipogon ORUFI05G02790 I 0.692
ORUFI07G24600 Oryza rufipogon ORUFI07G24600 I 0.667
OS01G0285300 Oryza sativa OS01G0285300 I 0.694
OS01G0702700 Oryza sativa OS01G0702700 I 0.747
OS05G0140100 Oryza sativa OS05G0140100 I 0.692
OS05G0543600 Oryza sativa OS05G0543600 I 0.763
Pavir.Ca01788 Panicum virgatum Pavir.Ca01788 I 0.772
Pavir.Ea00486 Panicum virgatum Pavir.Ea00486 I 0.906
Pavir.Ea01054 Panicum virgatum Pavir.Ea01054 I 0.697
Pavir.Eb00460 Panicum virgatum Pavir.Eb00460 I 0.906
Pavir.Eb01178 Panicum virgatum Pavir.Eb01178 I 0.697
Pavir.J03230 Panicum virgatum Pavir.J03230 I 0.667
Pavir.J18139 Panicum virgatum Pavir.J18139 I 0.748
Pavir.J19191 Panicum virgatum Pavir.J19191 I 0.772
Pavir.J20716 Panicum virgatum Pavir.J20716 I 0.748
Pavir.J31344 Panicum virgatum Pavir.J31344 I 0.689
Pavir.J40848 Panicum virgatum Pavir.J40848 I 0.692
PGSC0003DMG400015767 Solanum tuberosum PGSC0003DMG400015767 I 0.668
PGSC0003DMG400018279 Solanum tuberosum PGSC0003DMG400018279 I 0.692
PGSC0003DMG400027077 Solanum tuberosum PGSC0003DMG400027077 I 0.726
PK03176.1 Cannabis sativa PK03176.1 I 0.662
PK14287.1 Cannabis sativa PK14287.1 I 0.677
PK22647.1 Cannabis sativa PK22647.1 I 0.721
Pm024326 Prunus mume Pm024326 I 0.751
POPTR_0002s18700 Populus trichocarpa POPTR_0002s18700 I 0.667
POPTR_0012s08600 Populus trichocarpa POPTR_0012s08600 I 0.754
POPTR_0013s00290 Populus trichocarpa POPTR_0013s00290 I 0.662
POPTR_0014s10680 Populus trichocarpa POPTR_0014s10680 I 0.684
POPTR_0015s09430 Populus trichocarpa POPTR_0015s09430 I 0.749
PRUPE_ppa018561mg Prunus persica PRUPE_ppa018561mg I 0.751
SapurV1A.0011s0520 Salix purpurea SapurV1A.0011s0520 I 0.751
SapurV1A.0127s0240 Salix purpurea SapurV1A.0127s0240 I 0.742
SapurV1A.0321s0070 Salix purpurea SapurV1A.0321s0070 I 0.684
SapurV1A.0442s0250 Salix purpurea SapurV1A.0442s0250 I 0.662
SapurV1A.1077s0040 Salix purpurea SapurV1A.1077s0040 I 0.714
SapurV1A.3474s0020 Salix purpurea SapurV1A.3474s0020 I 0.684
Sb01g034270 Sorghum bicolor Sb01g034270 I 0.667
Sb03g011640 Sorghum bicolor Sb03g011640 I 0.697
Sb03g024500 Sorghum bicolor Sb03g024500 I 0.748
Sb03g032260 Sorghum bicolor Sb03g032260 I 0.747
Sb05g001215 Sorghum bicolor Sb05g001215 N 0.694
Sb09g003100 Sorghum bicolor Sb09g003100 I 0.683
Sb09g027200 Sorghum bicolor Sb09g027200 I 0.775
Si001565m.g Setaria italica Si001565m.g I 0.697
Si002220m.g Setaria italica Si002220m.g I 0.748
Si002550m.g Setaria italica Si002550m.g I 0.909
Si005548m.g Setaria italica Si005548m.g I 0.747
Si022113m.g Setaria italica Si022113m.g I 0.692
Si022730m.g Setaria italica Si022730m.g I 0.772
Si029872m.g Setaria italica Si029872m.g I 0.667
Si036638m.g Setaria italica Si036638m.g I 0.667
Solyc01g102340.2 Solanum lycopersicum Solyc01g102340.2 I 0.692
Solyc06g071690.2 Solanum lycopersicum Solyc06g071690.2 I 0.726
Solyc08g081500.1 Solanum lycopersicum Solyc08g081500.1 I 0.664
TCM_004965 Theobroma cacao TCM_004965 I 0.684
TCM_012174 Theobroma cacao TCM_012174 I 0.751
TCM_026853 Theobroma cacao TCM_026853 I 0.662
Thhalv10004450m.g Eutrema salsugineum Thhalv10004450m.g I 0.739
Thhalv10008000m.g Eutrema salsugineum Thhalv10008000m.g I 0.672
TRAES3BF071400020CFD_g Triticum aestivum TRAES3BF071400020CFD_g I 0.701
TRAES3BF082500050CFD_g Triticum aestivum TRAES3BF082500050CFD_g I 0.747
Traes_1AL_1A93B0C96 Triticum aestivum Traes_1AL_1A93B0C96 I 0.730
Traes_1AL_25726E5E7 Triticum aestivum Traes_1AL_25726E5E7 I 0.731
Traes_1AL_343F2D219 Triticum aestivum Traes_1AL_343F2D219 I 0.731
Traes_1AL_C7FD90C13 Triticum aestivum Traes_1AL_C7FD90C13 I 0.731
Traes_1AS_1EE692FDC Triticum aestivum Traes_1AS_1EE692FDC I 0.694
Traes_1BS_92EA1F290 Triticum aestivum Traes_1BS_92EA1F290 I 0.694
Traes_1DS_5BAD8947E Triticum aestivum Traes_1DS_5BAD8947E I 0.694
Traes_3DL_46F83C41D Triticum aestivum Traes_3DL_46F83C41D N 0.697
Traes_7AL_0BCF482E8 Triticum aestivum Traes_7AL_0BCF482E8 I 0.667
Traes_7DL_AD4395F8F Triticum aestivum Traes_7DL_AD4395F8F I 0.667
TRIUR3_16874 Triticum urartu TRIUR3_16874 I 0.740
TRIUR3_16876 Triticum urartu TRIUR3_16876 I 0.731
TRIUR3_20789 Triticum urartu TRIUR3_20789 I 0.667
TRIUR3_27020 Triticum urartu TRIUR3_27020 I 0.745
VIT_07s0005g02480 Vitis vinifera VIT_07s0005g02480 I 0.667
VIT_14s0060g00240 Vitis vinifera VIT_14s0060g00240 I 0.683
VIT_17s0000g09080 Vitis vinifera VIT_17s0000g09080 I 0.726