CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb03g010980
(
Sorghum bicolor
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Sb03g010980
T279174_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB56
M07130_2.00
Arabidopsis thaliana
DDHNHTAACKGWHWH
DWDWCMGTTADNDHH
Dap-seq
OMalley et al.(2016)
MYB56_col_a
0.664
0.710
MYB56
M07131_2.00
Arabidopsis thaliana
DNNHTAACGGWHWHD
HDWDWCCGTTADNNH
Dap-seq
OMalley et al.(2016)
MYB56_colamp_a
0.664
0.710
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb03g010980.1
Myb
57
103
RGHWCPSEDDKLKDLVARYGPKNWRRIAEKLEGRSGKSCRLRWINQL
Sb03g010980.1
Myb
109
154
RDAFSKEEEEQLLAARHAYGTKWSLIARLFPGRTDNAIKNHWHVMM
Links
Other
Myb/SANT
family TFs
Other
Sorghum bicolor
TFs
147 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy