CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb10g006570
(
Sorghum bicolor
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Sb10g006570
T279328_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q8RUX5_MAIZE
M11060_2.00
Zea mays
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MRP1_Q2
0.710
0.826
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb10g006570.1
Myb
137
183
KFWTKEEHRNFLHGLVVFGRGDWKNISRYFVTTRTPMQVSSHAQKYF
Links
Other
Myb/SANT
family TFs
Other
Sorghum bicolor
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.J00203
Panicum virgatum
Pavir.J00203
N
0.770
Si007889m.g
Setaria italica
Si007889m.g
I
0.756
OPUNC06G04640
Oryza punctata
OPUNC06G04640
I
0.752
Pavir.Ca01208
Panicum virgatum
Pavir.Ca01208
N
0.749
F775_03070
Aegilops tauschii
F775_03070
I
0.734
GRMZM2G402156
Zea mays
GRMZM2G402156
N
0.731
Pavir.J01189
Panicum virgatum
Pavir.J01189
I
0.723
MLOC_51337
Hordeum vulgare
MLOC_51337
N
0.722
F775_23301
Aegilops tauschii
F775_23301
N
0.722
TRIUR3_31433
Triticum urartu
TRIUR3_31433
N
0.722
F775_23426
Aegilops tauschii
F775_23426
N
0.722
TRIUR3_33433
Triticum urartu
TRIUR3_33433
N
0.722
Pavir.Da02101
Panicum virgatum
Pavir.Da02101
I
0.715
Q8RUX5_MAIZE
Zea mays
Q8RUX5_MAIZE
D
0.710
Sb09g003390
Sorghum bicolor
Sb09g003390
I
0.710
GRMZM2G111306
Zea mays
GRMZM2G111306
I
0.710
LPERR10G06560
Leersia perrieri
LPERR10G06560
N
0.708
Si032375m.g
Setaria italica
Si032375m.g
N
0.701
BGIOSGA021814
Oryza indica
BGIOSGA021814
N
0.701
Sb10g005020
Sorghum bicolor
Sb10g005020
I
0.691
Pavir.J00200
Panicum virgatum
Pavir.J00200
N
0.688
GRMZM2G121111
Zea mays
GRMZM2G121111
I
0.687
LPERR06G04390
Leersia perrieri
LPERR06G04390
N
0.683
F775_00072
Aegilops tauschii
F775_00072
N
0.682
F775_23221
Aegilops tauschii
F775_23221
N
0.669
Traes_1AL_FF8F7A939
Triticum aestivum
Traes_1AL_FF8F7A939
N
0.669
Pavir.Ga00772
Panicum virgatum
Pavir.Ga00772
N
0.665
LPERR06G04400
Leersia perrieri
LPERR06G04400
N
0.664