Sb10g024950 (Sorghum bicolor)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Sb10g024950 T279339_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
OS02G0187700
M02327_2.00
Oryza sativa
NTAMCKGTHN

NDACMGKTAN
PBM
Weirauch et al.(2014)
pTH8645
0.833 0.934
MYB1
M07068_2.00
Arabidopsis thaliana
HDNNDNHWHWAACSGYHWH

DWDRCSGTTWDWDNHNNHD
Dap-seq
OMalley et al.(2016)
MYB1_col_a
0.710 0.725
PK07741.1
M01277_2.00
Cannabis sativa
HAMCBRHHN

NDDYVGKTD
PBM
Lambert et al.(2019)
pTH11469
0.686 0.769
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb10g024950.1 Myb 11 57
Sb10g024950.1 Myb 63 106

Links

Other Myb/SANT family TFs
Other Sorghum bicolor TFs

202 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Si006938m.g Setaria italica Si006938m.g I 0.892
GRMZM5G803308 Zea mays GRMZM5G803308 I 0.892
Pavir.Db00693 Panicum virgatum Pavir.Db00693 I 0.892
Pavir.Da00404 Panicum virgatum Pavir.Da00404 I 0.892
GRMZM2G078820 Zea mays GRMZM2G078820 I 0.866
LPERR06G18380 Leersia perrieri LPERR06G18380 I 0.853
GRMZM2G145444 Zea mays GRMZM2G145444 I 0.851
Si017917m.g Setaria italica Si017917m.g I 0.851
Pavir.J23512 Panicum virgatum Pavir.J23512 I 0.851
LPERR02G05810 Leersia perrieri LPERR02G05810 I 0.851
Sb04g005940 Sorghum bicolor Sb04g005940 I 0.851
TRIUR3_25447 Triticum urartu TRIUR3_25447 I 0.846
MLOC_63964 Hordeum vulgare MLOC_63964 I 0.846
Pavir.Ab00649 Panicum virgatum Pavir.Ab00649 I 0.842
ORUFI06G23790 Oryza rufipogon ORUFI06G23790 I 0.836
ONIVA06G26080 Oryza nivara ONIVA06G26080 I 0.836
OGLUM06G23260 Oryza glumaepatula OGLUM06G23260 I 0.836
OS06G0637500 Oryza sativa OS06G0637500 I 0.836
OMERI06G22090 Oryza meridionalis OMERI06G22090 I 0.836
ORGLA06G0184100 Oryza glaberrima ORGLA06G0184100 I 0.836
BGIOSGA020819 Oryza indica BGIOSGA020819 I 0.836
OPUNC02G05820 Oryza punctata OPUNC02G05820 I 0.833
ONIVA02G08210 Oryza nivara ONIVA02G08210 I 0.833
OMERI02G07700 Oryza meridionalis OMERI02G07700 I 0.833
ORUFI02G06760 Oryza rufipogon ORUFI02G06760 I 0.833
ORGLA02G0061500 Oryza glaberrima ORGLA02G0061500 I 0.833
OGLUM02G06640 Oryza glumaepatula OGLUM02G06640 I 0.833
MLOC_7426 Hordeum vulgare MLOC_7426 I 0.833
OS02G0187700 Oryza sativa OS02G0187700 D 0.833
Traes_7DL_1FA87027B Triticum aestivum Traes_7DL_1FA87027B I 0.822
BRADI3G06470 Brachypodium distachyon BRADI3G06470 I 0.809
OPUNC06G19910 Oryza punctata OPUNC06G19910 I 0.806
MLOC_64963 Hordeum vulgare MLOC_64963 I 0.792
GRMZM2G087955 Zea mays GRMZM2G087955 I 0.774
Pavir.J29846 Panicum virgatum Pavir.J29846 I 0.772
MLOC_64817 Hordeum vulgare MLOC_64817 I 0.759
Traes_5DL_92CBBE968 Triticum aestivum Traes_5DL_92CBBE968 I 0.759
Traes_5BL_486D0D865 Triticum aestivum Traes_5BL_486D0D865 I 0.759
BRADI4G08220 Brachypodium distachyon BRADI4G08220 I 0.757
MTR_6g015455 Medicago truncatula MTR_6g015455 I 0.755
Si032789m.g Setaria italica Si032789m.g I 0.754
Pavir.Ba03084 Panicum virgatum Pavir.Ba03084 I 0.754
Sb02g013010 Sorghum bicolor Sb02g013010 I 0.754
ORUFI09G00360 Oryza rufipogon ORUFI09G00360 I 0.750
OMERI08G05160 Oryza meridionalis OMERI08G05160 I 0.750
ONIVA09G00250 Oryza nivara ONIVA09G00250 I 0.750
OB09G10200 Oryza brachyantha OB09G10200 I 0.750
OPUNC12G06260 Oryza punctata OPUNC12G06260 I 0.750
BGIOSGA030245 Oryza indica BGIOSGA030245 I 0.750
ORGLA09G0002900 Oryza glaberrima ORGLA09G0002900 I 0.750
OBART09G00310 Oryza barthii OBART09G00310 I 0.750
LPERR09G00910 Leersia perrieri LPERR09G00910 I 0.750
OGLUM09G00340 Oryza glumaepatula OGLUM09G00340 I 0.750
OS09G0106700 Oryza sativa OS09G0106700 I 0.750
BRADI1G30252 Brachypodium distachyon BRADI1G30252 I 0.749
cassava8939.m1 Manihot esculenta cassava8939.m1 I 0.744
GRMZM2G050550 Zea mays GRMZM2G050550 I 0.737
AMTR_s00007p00169630 Amborella trichopoda AMTR_s00007p00169630 I 0.736
29801.m003096 Ricinus communis 29801.m003096 I 0.735
Cla022889 Citrullus lanatus Cla022889 I 0.730
Cucsa.232630 Cucumis sativus Cucsa.232630 I 0.730
GSMUA_Achr1G26140_001 Musa acuminata GSMUA_Achr1G26140_001 I 0.726
TCM_033907 Theobroma cacao TCM_033907 I 0.726
GSMUA_Achr3G13070_001 Musa acuminata GSMUA_Achr3G13070_001 I 0.725
mgf023922m Mimulus guttatus mgf023922m I 0.725
PGSC0003DMG400007994 Solanum tuberosum PGSC0003DMG400007994 I 0.721
Solyc04g079360.1 Solanum lycopersicum Solyc04g079360.1 I 0.721
POPTR_0007s10490 Populus trichocarpa POPTR_0007s10490 I 0.720
GSMUA_Achr4G20150_001 Musa acuminata GSMUA_Achr4G20150_001 I 0.716
VIT_03s0180g00210 Vitis vinifera VIT_03s0180g00210 I 0.715
mgf003084m Mimulus guttatus mgf003084m I 0.714
Eucgr.F00002 Eucalyptus grandis Eucgr.F00002 I 0.713
mgf006151m Mimulus guttatus mgf006151m I 0.713
GLYMA17G35620 Glycine max GLYMA17G35620 I 0.711
MYB1 Arabidopsis thaliana AT3G09230 D 0.710
orange1.1g040502m.g Citrus sinensis orange1.1g040502m.g I 0.710
Ciclev10029124m.g Citrus clementina Ciclev10029124m.g I 0.710
Cucsa.123440 Cucumis sativus Cucsa.123440 I 0.708
Eucgr.E02958 Eucalyptus grandis Eucgr.E02958 I 0.705
Cla021015 Citrullus lanatus Cla021015 I 0.705
POPTR_0002s13030 Populus trichocarpa POPTR_0002s13030 I 0.703
GSMUA_Achr9G22600_001 Musa acuminata GSMUA_Achr9G22600_001 I 0.702
e_gw1.53.214.1 Physcomitrella patens e_gw1.53.214.1 I 0.701
chr2.LjT13M01.180.nd Lotus japonicus chr2.LjT13M01.180.nd I 0.701
e_gw1.72.10.1 Physcomitrella patens e_gw1.72.10.1 I 0.701
PK29071.1 Cannabis sativa PK29071.1 I 0.700
chr5.CM0096.100.nc Lotus japonicus chr5.CM0096.100.nc I 0.700
SapurV1A.0525s0230 Salix purpurea SapurV1A.0525s0230 I 0.700
Aquca_007_00580 Aquilegia coerulea Aquca_007_00580 I 0.700
Gorai.012G149000 Gossypium raimondii Gorai.012G149000 I 0.699
VIT_18s0001g11170 Vitis vinifera VIT_18s0001g11170 I 0.698
Pm018862 Prunus mume Pm018862 I 0.697
TRAES3BF039800050CFD_g Triticum aestivum TRAES3BF039800050CFD_g I 0.696
MLOC_10322 Hordeum vulgare MLOC_10322 I 0.696
GLYMA05G21220 Glycine max GLYMA05G21220 I 0.694
gw1.10.6.1 Physcomitrella patens gw1.10.6.1 I 0.693
gene09039-v1.0-hybrid Fragaria vesca gene09039-v1.0-hybrid I 0.693
MDP0000284922 Malus domestica MDP0000284922 I 0.693
GSMUA_Achr3G28230_001 Musa acuminata GSMUA_Achr3G28230_001 I 0.692
GSMUA_Achr4G12950_001 Musa acuminata GSMUA_Achr4G12950_001 I 0.691
GSMUA_Achr4G09450_001 Musa acuminata GSMUA_Achr4G09450_001 I 0.691
Eucgr.J00250 Eucalyptus grandis Eucgr.J00250 I 0.690
POPTR_0005s18620 Populus trichocarpa POPTR_0005s18620 I 0.690
CM0528.210.nd Lotus japonicus CM0528.210.nd I 0.690
cassava7558.valid.m1 Manihot esculenta cassava7558.valid.m1 I 0.689
LPERR05G10150 Leersia perrieri LPERR05G10150 I 0.688
GLYMA04G04490 Glycine max GLYMA04G04490 I 0.688
Thhalv10021963m.g Eutrema salsugineum Thhalv10021963m.g I 0.688
AtMYB1 Arabidopsis lyrata scaffold_301043.1 I 0.688
GSMUA_AchrUn_randomG01280_001 Musa acuminata GSMUA_AchrUn_randomG01280_001 I 0.688
30170.m013927 Ricinus communis 30170.m013927 I 0.686
Ciclev10002239m.g Citrus clementina Ciclev10002239m.g I 0.686
SapurV1A.0017s0390 Salix purpurea SapurV1A.0017s0390 I 0.686
orange1.1g025351m.g Citrus sinensis orange1.1g025351m.g I 0.686
mgf018580m Mimulus guttatus mgf018580m I 0.686
evm.TU.supercontig_376.4 Carica papaya evm.TU.supercontig_376.4 I 0.686
PK07741.1 Cannabis sativa PK07741.1 D 0.686
Eucgr.F00031 Eucalyptus grandis Eucgr.F00031 I 0.684
Ciclev10031463m.g Citrus clementina Ciclev10031463m.g I 0.683
SapurV1A.0167s0310 Salix purpurea SapurV1A.0167s0310 I 0.683
PGSC0003DMG400020338 Solanum tuberosum PGSC0003DMG400020338 I 0.683
POPTR_0002s12410 Populus trichocarpa POPTR_0002s12410 I 0.683
Solyc09g011780.2 Solanum lycopersicum Solyc09g011780.2 I 0.683
orange1.1g012494m.g Citrus sinensis orange1.1g012494m.g I 0.683
cassava1242.valid.m1 Manihot esculenta cassava1242.valid.m1 I 0.683
evm.TU.supercontig_19.238 Carica papaya evm.TU.supercontig_19.238 I 0.683
TCM_007138 Theobroma cacao TCM_007138 I 0.682
Gorai.010G023500 Gossypium raimondii Gorai.010G023500 I 0.682
gene26289-v1.0-hybrid Fragaria vesca gene26289-v1.0-hybrid I 0.682
SELMODRAFT_99462 Selaginella moellendorffii SELMODRAFT_99462 I 0.682
SELMODRAFT_103999 Selaginella moellendorffii SELMODRAFT_103999 I 0.682
PK17282.1 Cannabis sativa PK17282.1 I 0.681
GLYMA14G06870 Glycine max GLYMA14G06870 I 0.681
Cagra.2515s0014 Capsella grandiflora Cagra.2515s0014 I 0.679
Carubv10013882m.g Capsella rubella Carubv10013882m.g I 0.679
Gorai.011G278500 Gossypium raimondii Gorai.011G278500 I 0.679
Gorai.010G016800 Gossypium raimondii Gorai.010G016800 I 0.679
TCM_042629 Theobroma cacao TCM_042629 I 0.679
gene20888-v1.0-hybrid Fragaria vesca gene20888-v1.0-hybrid I 0.678
Lus10040239.g Linum usitatissimum Lus10040239.g I 0.678
Lus10028250.g Linum usitatissimum Lus10028250.g I 0.678
cassava47374.m1 Manihot esculenta cassava47374.m1 I 0.678
Si001686m.g Setaria italica Si001686m.g I 0.677
Sb03g039950 Sorghum bicolor Sb03g039950 I 0.677
GRMZM2G169316 Zea mays GRMZM2G169316 I 0.677
Pavir.Ea03398 Panicum virgatum Pavir.Ea03398 I 0.677
Pavir.J13677 Panicum virgatum Pavir.J13677 I 0.677
cassava16103.m1 Manihot esculenta cassava16103.m1 I 0.677
Lus10021762.g Linum usitatissimum Lus10021762.g I 0.676
MDP0000463846 Malus domestica MDP0000463846 I 0.675
SapurV1A.0597s0060 Salix purpurea SapurV1A.0597s0060 I 0.675
PRUPE_ppa008979mg Prunus persica PRUPE_ppa008979mg I 0.675
orange1.1g022144m.g Citrus sinensis orange1.1g022144m.g I 0.675
cassava46434.m1 Manihot esculenta cassava46434.m1 I 0.675
Pm005332 Prunus mume Pm005332 I 0.675
Ciclev10001979m.g Citrus clementina Ciclev10001979m.g I 0.675
30170.m013698 Ricinus communis 30170.m013698 I 0.675
MDP0000807341 Malus domestica MDP0000807341 I 0.673
SELMODRAFT_77255 Selaginella moellendorffii SELMODRAFT_77255 I 0.672
Cla014191 Citrullus lanatus Cla014191 I 0.672
SELMODRAFT_113522 Selaginella moellendorffii SELMODRAFT_113522 I 0.672
MDP0000275800 Malus domestica MDP0000275800 I 0.672
Cucsa.102710 Cucumis sativus Cucsa.102710 I 0.672
gene00185-v1.0-hybrid Fragaria vesca gene00185-v1.0-hybrid I 0.670
Lus10032764.g Linum usitatissimum Lus10032764.g I 0.669
MDP0000894463 Malus domestica MDP0000894463 I 0.669
VIT_18s0001g09850 Vitis vinifera VIT_18s0001g09850 I 0.669
Gorai.009G208900 Gossypium raimondii Gorai.009G208900 I 0.669
29970.m000987 Ricinus communis 29970.m000987 I 0.669
gene24027-v1.0-hybrid Fragaria vesca gene24027-v1.0-hybrid I 0.669
PRUPE_ppa010735mg Prunus persica PRUPE_ppa010735mg I 0.669
PRUPE_ppa008450mg Prunus persica PRUPE_ppa008450mg I 0.669
Pm005220 Prunus mume Pm005220 I 0.669
Lus10014103.g Linum usitatissimum Lus10014103.g I 0.668
Cucsa.066910 Cucumis sativus Cucsa.066910 I 0.666
Cla018417 Citrullus lanatus Cla018417 I 0.666
MTR_4g019370 Medicago truncatula MTR_4g019370 I 0.666
estExt_fgenesh4_pg.C_10375 Volvox carteri estExt_fgenesh4_pg.C_10375 I 0.666
GLYMA14G09540 Glycine max GLYMA14G09540 I 0.666
GLYMA01G26650 Glycine max GLYMA01G26650 I 0.666
MDP0000203733 Malus domestica MDP0000203733 I 0.666
Gorai.009G276400 Gossypium raimondii Gorai.009G276400 I 0.666
AMTR_s00029p00183640 Amborella trichopoda AMTR_s00029p00183640 I 0.666
MDP0000478512 Malus domestica MDP0000478512 I 0.666
MDP0000319124 Malus domestica MDP0000319124 I 0.666
Eucgr.H02226 Eucalyptus grandis Eucgr.H02226 I 0.666
GLYMA03G15810 Glycine max GLYMA03G15810 I 0.666
GLYMA14G06320 Glycine max GLYMA14G06320 I 0.665
GSMUA_Achr5G28780_001 Musa acuminata GSMUA_Achr5G28780_001 I 0.663
SapurV1A.0709s0060 Salix purpurea SapurV1A.0709s0060 I 0.663
GSMUA_Achr6G33470_001 Musa acuminata GSMUA_Achr6G33470_001 I 0.663
PRUPE_ppa006851mg Prunus persica PRUPE_ppa006851mg I 0.663
27798.m000612 Ricinus communis 27798.m000612 I 0.663
Eucgr.F02372 Eucalyptus grandis Eucgr.F02372 I 0.663
Gorai.006G179700 Gossypium raimondii Gorai.006G179700 I 0.663
TCM_021796 Theobroma cacao TCM_021796 I 0.663
mgf015566m Mimulus guttatus mgf015566m I 0.663
Ca_02182 Cicer arietinum Ca_02182 I 0.663
cassava2215.valid.m1 Manihot esculenta cassava2215.valid.m1 I 0.663
Pm002576 Prunus mume Pm002576 I 0.663
Lus10010238.g Linum usitatissimum Lus10010238.g I 0.662
gene21001-v1.0-hybrid Fragaria vesca gene21001-v1.0-hybrid I 0.662