ATY53 (Arabidopsis lyrata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 scaffold_301452.1 T279379_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATY53
M07078_2.00 		Arabidopsis thaliana
YBYACCWAMCDHHNNNNNNNN
NNNNNNNNDDHGKTWGGTRVR		 Dap-seq
OMalley et al.(2016)
MYB67_col_a 		0.876 0.978
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold_301452.1 Myb 24 71
scaffold_301452.1 Myb 77 122

Links

Other Myb/SANT family TFs
Other Arabidopsis lyrata TFs

264 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.3640s0047 Boechera stricta Bostr.3640s0047 I 0.893
30125.m001257 Ricinus communis 30125.m001257 I 0.891
ATY53 Arabidopsis thaliana AT3G12720 D 0.876
Cagra.5641s0037 Capsella grandiflora Cagra.5641s0037 I 0.876
Carubv10015099m.g Capsella rubella Carubv10015099m.g I 0.876
Thhalv10022066m.g Eutrema salsugineum Thhalv10022066m.g I 0.869
Bo1g138990 Brassica oleracea Bo1g138990 I 0.863
Bra039339 Brassica rapa Bra039339 I 0.863
Bo5g133210 Brassica oleracea Bo5g133210 I 0.860
SapurV1A.4138s0010 Salix purpurea SapurV1A.4138s0010 I 0.860
SapurV1A.0149s0490 Salix purpurea SapurV1A.0149s0490 I 0.860
Bra034738 Brassica rapa Bra034738 I 0.860
TCM_005977 Theobroma cacao TCM_005977 I 0.849
GLYMA08G17371 Glycine max GLYMA08G17371 I 0.848
cassava44228.m1 Manihot esculenta cassava44228.m1 I 0.846
Gorai.004G268300 Gossypium raimondii Gorai.004G268300 I 0.845
cassava33147.m1 Manihot esculenta cassava33147.m1 I 0.843
LjT35F06.10.nd Lotus japonicus LjT35F06.10.nd I 0.842
SapurV1A.0122s0490 Salix purpurea SapurV1A.0122s0490 I 0.833
POPTR_0008s08110 Populus trichocarpa POPTR_0008s08110 I 0.830
Pm010927 Prunus mume Pm010927 I 0.828
MTR_2g064160 Medicago truncatula MTR_2g064160 I 0.824
ATY53 Vitis vinifera VIT_19s0085g00940 I 0.821
TCM_033645 Theobroma cacao TCM_033645 I 0.815
Eucgr.E04323 Eucalyptus grandis Eucgr.E04323 I 0.814
POPTR_0003s15440 Populus trichocarpa POPTR_0003s15440 I 0.812
27956.m000359 Ricinus communis 27956.m000359 I 0.812
MDP0000157506 Malus domestica MDP0000157506 I 0.811
POPTR_0001s12240 Populus trichocarpa POPTR_0001s12240 I 0.810
cassava11527.m1 Manihot esculenta cassava11527.m1 I 0.807
SapurV1A.0093s0250 Salix purpurea SapurV1A.0093s0250 I 0.806
GLYMA15G41810 Glycine max GLYMA15G41810 I 0.803
MDP0000226667 Malus domestica MDP0000226667 I 0.801
Ciclev10006752m.g Citrus clementina Ciclev10006752m.g I 0.797
orange1.1g036087m.g Citrus sinensis orange1.1g036087m.g I 0.797
Aquca_030_00294 Aquilegia coerulea Aquca_030_00294 I 0.797
orange1.1g039070m.g Citrus sinensis orange1.1g039070m.g I 0.796
Ciclev10018009m.g Citrus clementina Ciclev10018009m.g I 0.796
VIT_01s0010g00410 Vitis vinifera VIT_01s0010g00410 I 0.792
Pm010847 Prunus mume Pm010847 I 0.786
PRUPE_ppa026618mg Prunus persica PRUPE_ppa026618mg I 0.786
SapurV1A.0236s0090 Salix purpurea SapurV1A.0236s0090 I 0.785
cassava26068.m1 Manihot esculenta cassava26068.m1 I 0.784
chr3.CM0049.330.nc Lotus japonicus chr3.CM0049.330.nc I 0.781
Solyc02g082040.2 Solanum lycopersicum Solyc02g082040.2 I 0.780
POPTR_0010s18170 Populus trichocarpa POPTR_0010s18170 I 0.778
GSMUA_Achr9G11190_001 Musa acuminata GSMUA_Achr9G11190_001 I 0.776
PRUPE_ppa022859mg Prunus persica PRUPE_ppa022859mg I 0.764
gene19715-v1.0-hybrid Fragaria vesca gene19715-v1.0-hybrid I 0.754
Si030152m.g Setaria italica Si030152m.g I 0.753
Sb02g033830 Sorghum bicolor Sb02g033830 I 0.753
Traes_2AS_40FA27AE7 Triticum aestivum Traes_2AS_40FA27AE7 I 0.753
OMERI07G11910 Oryza meridionalis OMERI07G11910 I 0.753
BGIOSGA024270 Oryza indica BGIOSGA024270 I 0.753
GRMZM2G172327 Zea mays GRMZM2G172327 I 0.753
ORUFI07G15620 Oryza rufipogon ORUFI07G15620 I 0.753
ORGLA07G0124200 Oryza glaberrima ORGLA07G0124200 I 0.753
OS07G0497500 Oryza sativa OS07G0497500 I 0.753
OBART07G15150 Oryza barthii OBART07G15150 I 0.753
MLOC_56753 Hordeum vulgare MLOC_56753 I 0.753
OPUNC07G13970 Oryza punctata OPUNC07G13970 I 0.753
TRIUR3_26358 Triticum urartu TRIUR3_26358 I 0.753
LPERR07G12760 Leersia perrieri LPERR07G12760 I 0.753
Pavir.Ba00923 Panicum virgatum Pavir.Ba00923 I 0.753
F775_00835 Aegilops tauschii F775_00835 I 0.753
Pavir.Bb02786 Panicum virgatum Pavir.Bb02786 I 0.753
GLYMA15G02955 Glycine max GLYMA15G02955 I 0.752
AMTR_s00032p00221670 Amborella trichopoda AMTR_s00032p00221670 I 0.749
MTR_8g017540 Medicago truncatula MTR_8g017540 I 0.749
PK22855.1 Cannabis sativa PK22855.1 I 0.742
MYB26 Populus trichocarpa POPTR_0001s20370 I 0.742
Gorai.011G063900 Gossypium raimondii Gorai.011G063900 I 0.742
MDP0000148894 Malus domestica MDP0000148894 I 0.742
GLYMA07G01050 Glycine max GLYMA07G01050 I 0.742
GLYMA08G20440 Glycine max GLYMA08G20440 I 0.742
GLYMA13G42431 Glycine max GLYMA13G42431 I 0.742
Ca_10069 Cicer arietinum Ca_10069 I 0.742
Ca_02730 Cicer arietinum Ca_02730 I 0.742
TCM_029065 Theobroma cacao TCM_029065 I 0.742
SapurV1A.0177s0130 Salix purpurea SapurV1A.0177s0130 I 0.742
Pm013322 Prunus mume Pm013322 I 0.742
Lus10015608.g Linum usitatissimum Lus10015608.g I 0.742
PRUPE_ppa015032mg Prunus persica PRUPE_ppa015032mg I 0.742
Solyc03g121740.1 Solanum lycopersicum Solyc03g121740.1 I 0.742
GSMUA_Achr9G25110_001 Musa acuminata GSMUA_Achr9G25110_001 I 0.741
Cucsa.340960 Cucumis sativus Cucsa.340960 I 0.740
Cla012793 Citrullus lanatus Cla012793 I 0.740
gene19934-v1.0-hybrid Fragaria vesca gene19934-v1.0-hybrid I 0.739
MTR_8g017440 Medicago truncatula MTR_8g017440 I 0.739
cassava176.valid.m1 Manihot esculenta cassava176.valid.m1 I 0.739
Aquca_020_00444 Aquilegia coerulea Aquca_020_00444 I 0.738
PGSC0003DMG400007325 Solanum tuberosum PGSC0003DMG400007325 I 0.735
Thhalv10021042m.g Eutrema salsugineum Thhalv10021042m.g I 0.733
Bra021515 Brassica rapa Bra021515 I 0.733
Bo1g134790 Brassica oleracea Bo1g134790 I 0.733
Eucgr.F03143 Eucalyptus grandis Eucgr.F03143 I 0.733
Gorai.009G142200 Gossypium raimondii Gorai.009G142200 I 0.731
cassava34928.m1 Manihot esculenta cassava34928.m1 I 0.730
Solyc10g005240.2 Solanum lycopersicum Solyc10g005240.2 I 0.730
GSMUA_Achr8G03510_001 Musa acuminata GSMUA_Achr8G03510_001 I 0.730
OB07G21090 Oryza brachyantha OB07G21090 I 0.729
Traes_2BS_CA02DC5B2 Triticum aestivum Traes_2BS_CA02DC5B2 I 0.729
SapurV1A.0538s0150 Salix purpurea SapurV1A.0538s0150 I 0.729
gene06920-v1.0-hybrid Fragaria vesca gene06920-v1.0-hybrid I 0.729
SapurV1A.1869s0040 Salix purpurea SapurV1A.1869s0040 I 0.729
MTR_8g017500 Medicago truncatula MTR_8g017500 I 0.723
ORGLA01G0234600 Oryza glaberrima ORGLA01G0234600 I 0.718
OLONG_008660 Oryza longistaminata OLONG_008660 I 0.718
BGIOSGA004306 Oryza indica BGIOSGA004306 I 0.718
Ciclev10027201m.g Citrus clementina Ciclev10027201m.g I 0.718
OS01G0709000 Oryza sativa OS01G0709000 I 0.718
MTR_8g017350 Medicago truncatula MTR_8g017350 I 0.717
BRADI1G61397 Brachypodium distachyon BRADI1G61397 I 0.716
MTR_8g017340 Medicago truncatula MTR_8g017340 I 0.713
mgf026023m Mimulus guttatus mgf026023m I 0.713
MTR_2g099740 Medicago truncatula MTR_2g099740 I 0.712
evm.TU.supercontig_25.69 Carica papaya evm.TU.supercontig_25.69 I 0.712
PGSC0003DMG400037038 Solanum tuberosum PGSC0003DMG400037038 I 0.712
LPERR01G24370 Leersia perrieri LPERR01G24370 I 0.709
OPUNC01G28160 Oryza punctata OPUNC01G28160 I 0.709
BRADI2G47887 Brachypodium distachyon BRADI2G47887 I 0.709
OB01G37410 Oryza brachyantha OB01G37410 I 0.709
MYB26 Vitis vinifera VIT_09s0002g01670 I 0.708
Si002319m.g Setaria italica Si002319m.g I 0.706
Pavir.Ea02594 Panicum virgatum Pavir.Ea02594 I 0.706
Sb03g032600 Sorghum bicolor Sb03g032600 I 0.706
MYB26 Arabidopsis lyrata fgenesh2_kg.3__1496__AT3G13890.1 I 0.703
MYB26 Arabidopsis thaliana AT3G13890 I 0.703
Cagra.0736s0026 Capsella grandiflora Cagra.0736s0026 I 0.703
Bostr.28625s0318 Boechera stricta Bostr.28625s0318 I 0.703
Carubv10015767m.g Capsella rubella Carubv10015767m.g I 0.703
GSMUA_Achr6G35800_001 Musa acuminata GSMUA_Achr6G35800_001 I 0.702
LPERR06G07150 Leersia perrieri LPERR06G07150 I 0.702
Carubv10020714m.g Capsella rubella Carubv10020714m.g I 0.701
Cagra.10702s0006 Capsella grandiflora Cagra.10702s0006 I 0.701
PK29171.1 Cannabis sativa PK29171.1 I 0.698
Lus10038395.g Linum usitatissimum Lus10038395.g I 0.698
BRADI1G26920 Brachypodium distachyon BRADI1G26920 I 0.695
Pavir.J29561 Panicum virgatum Pavir.J29561 I 0.695
Pavir.Fb00364 Panicum virgatum Pavir.Fb00364 I 0.695
OB08G13090 Oryza brachyantha OB08G13090 I 0.695
ONIVA06G02400 Oryza nivara ONIVA06G02400 I 0.695
BGIOSGA027659 Oryza indica BGIOSGA027659 I 0.695
OMERI08G02950 Oryza meridionalis OMERI08G02950 I 0.695
OBART08G03020 Oryza barthii OBART08G03020 I 0.695
ORGLA08G0023900 Oryza glaberrima ORGLA08G0023900 I 0.695
LPERR08G03020 Leersia perrieri LPERR08G03020 I 0.695
OS08G0151300 Oryza sativa OS08G0151300 I 0.695
ORUFI08G03380 Oryza rufipogon ORUFI08G03380 I 0.695
OGLUM08G03030 Oryza glumaepatula OGLUM08G03030 I 0.695
Sb07g003320 Sorghum bicolor Sb07g003320 I 0.695
GRMZM2G325907 Zea mays GRMZM2G325907 I 0.695
MTR_8g017390 Medicago truncatula MTR_8g017390 I 0.694
OB06G17320 Oryza brachyantha OB06G17320 I 0.693
AMTR_s00079p00143780 Amborella trichopoda AMTR_s00079p00143780 I 0.691
OGLUM06G08200 Oryza glumaepatula OGLUM06G08200 I 0.689
OBART06G07710 Oryza barthii OBART06G07710 I 0.689
ONIVA06G08940 Oryza nivara ONIVA06G08940 I 0.689
OS06G0221000 Oryza sativa OS06G0221000 I 0.689
ORUFI06G07920 Oryza rufipogon ORUFI06G07920 I 0.689
ORGLA06G0073000 Oryza glaberrima ORGLA06G0073000 I 0.689
OMERI08G14710 Oryza meridionalis OMERI08G14710 I 0.688
OB08G25790 Oryza brachyantha OB08G25790 I 0.688
ONIVA08G20680 Oryza nivara ONIVA08G20680 I 0.688
OGLUM08G19650 Oryza glumaepatula OGLUM08G19650 I 0.688
ORGLA08G0162300 Oryza glaberrima ORGLA08G0162300 I 0.688
ORUFI08G20890 Oryza rufipogon ORUFI08G20890 I 0.688
GSMUA_AchrUn_randomG15560_001 Musa acuminata GSMUA_AchrUn_randomG15560_001 I 0.686
30054.m000809 Ricinus communis 30054.m000809 I 0.685
Pavir.Fb01820 Panicum virgatum Pavir.Fb01820 I 0.685
Pavir.J21520 Panicum virgatum Pavir.J21520 I 0.684
GSMUA_Achr5G18080_001 Musa acuminata GSMUA_Achr5G18080_001 I 0.683
GRMZM2G111045 Zea mays GRMZM2G111045 I 0.683
evm.TU.supercontig_752.1 Carica papaya evm.TU.supercontig_752.1 I 0.680
Gorai.009G281000 Gossypium raimondii Gorai.009G281000 I 0.680
gene16287-v1.0-hybrid Fragaria vesca gene16287-v1.0-hybrid I 0.680
MDP0000228252 Malus domestica MDP0000228252 I 0.680
MDP0000302984 Malus domestica MDP0000302984 I 0.680
MDP0000320772 Malus domestica MDP0000320772 I 0.680
GSMUA_Achr10G19130_001 Musa acuminata GSMUA_Achr10G19130_001 I 0.680
SapurV1A.2488s0010 Salix purpurea SapurV1A.2488s0010 I 0.680
chr2.CM0124.80.nc Lotus japonicus chr2.CM0124.80.nc I 0.680
SapurV1A.0403s0220 Salix purpurea SapurV1A.0403s0220 I 0.680
TCM_001102 Theobroma cacao TCM_001102 I 0.680
TCM_034902 Theobroma cacao TCM_034902 I 0.680
PRUPE_ppa019923mg Prunus persica PRUPE_ppa019923mg I 0.680
Pm002011 Prunus mume Pm002011 I 0.680
POPTR_0005s07590 Populus trichocarpa POPTR_0005s07590 I 0.680
Ciclev10003251m.g Citrus clementina Ciclev10003251m.g I 0.679
TRIUR3_24104 Triticum urartu TRIUR3_24104 I 0.678
Cucsa.318610 Cucumis sativus Cucsa.318610 I 0.678
Traes_7DL_5BD0D4BD1 Triticum aestivum Traes_7DL_5BD0D4BD1 I 0.678
PDK_20s1854611g001 Phoenix dactylifera PDK_20s1854611g001 I 0.678
GSMUA_Achr2G02970_001 Musa acuminata GSMUA_Achr2G02970_001 I 0.678
OPUNC08G02760 Oryza punctata OPUNC08G02760 I 0.678
GSMUA_Achr10G08070_001 Musa acuminata GSMUA_Achr10G08070_001 I 0.678
BRADI3G17165 Brachypodium distachyon BRADI3G17165 I 0.678
Cla013211 Citrullus lanatus Cla013211 I 0.678
MLOC_16981 Hordeum vulgare MLOC_16981 I 0.678
F775_28951 Aegilops tauschii F775_28951 I 0.678
VIT_05s0020g01100 Vitis vinifera VIT_05s0020g01100 I 0.677
GRMZM2G088783 Zea mays GRMZM2G088783 I 0.676
TRIUR3_25230 Triticum urartu TRIUR3_25230 I 0.676
Traes_3AL_E3BF20F0D Triticum aestivum Traes_3AL_E3BF20F0D I 0.676
BRADI1G45510 Brachypodium distachyon BRADI1G45510 I 0.676
F775_17110 Aegilops tauschii F775_17110 I 0.676
MLOC_18177 Hordeum vulgare MLOC_18177 I 0.676
GLYMA01G02070 Glycine max GLYMA01G02070 I 0.675
GLYMA09G33870 Glycine max GLYMA09G33870 I 0.675
Eucgr.H01337 Eucalyptus grandis Eucgr.H01337 I 0.674
gene31836-v1.0-hybrid Fragaria vesca gene31836-v1.0-hybrid I 0.673
evm.TU.supercontig_18.232 Carica papaya evm.TU.supercontig_18.232 I 0.673
F775_06136 Aegilops tauschii F775_06136 I 0.672
cassava44907.m1 Manihot esculenta cassava44907.m1 I 0.672
Traes_7DS_469ED3135 Triticum aestivum Traes_7DS_469ED3135 I 0.672
Traes_7BS_7E91DE546 Triticum aestivum Traes_7BS_7E91DE546 I 0.672
MDP0000158937 Malus domestica MDP0000158937 I 0.672
AMTR_s00038p00183620 Amborella trichopoda AMTR_s00038p00183620 I 0.671
VIT_07s0141g00100 Vitis vinifera VIT_07s0141g00100 I 0.671
Si008086m.g Setaria italica Si008086m.g I 0.671
AtMYB93 Vitis vinifera VIT_18s0001g05670 I 0.670
MYB39 Vitis vinifera VIT_02s0012g01650 I 0.669
cassava17115.m1 Manihot esculenta cassava17115.m1 I 0.669
Traes_7AL_0BCF482E8 Triticum aestivum Traes_7AL_0BCF482E8 I 0.668
TRIUR3_20789 Triticum urartu TRIUR3_20789 I 0.668
Pavir.J03230 Panicum virgatum Pavir.J03230 I 0.668
BGIOSGA010658 Oryza indica BGIOSGA010658 I 0.668
Sb01g034270 Sorghum bicolor Sb01g034270 I 0.668
MLOC_37780 Hordeum vulgare MLOC_37780 I 0.668
OMERI03G17220 Oryza meridionalis OMERI03G17220 I 0.668
GRMZM2G147698 Zea mays GRMZM2G147698 I 0.668
Si036638m.g Setaria italica Si036638m.g I 0.668
Traes_7DL_AD4395F8F Triticum aestivum Traes_7DL_AD4395F8F I 0.668
mgf012840m Mimulus guttatus mgf012840m I 0.668
F775_18488 Aegilops tauschii F775_18488 I 0.668
GSMUA_Achr10G24560_001 Musa acuminata GSMUA_Achr10G24560_001 I 0.667
Traes_7AL_04D939077 Triticum aestivum Traes_7AL_04D939077 I 0.667
GRMZM2G040924 Zea mays GRMZM2G040924 I 0.666
Sb04g033670 Sorghum bicolor Sb04g033670 I 0.666
Aquca_013_00356 Aquilegia coerulea Aquca_013_00356 I 0.666
e_gw1.317.17.1 Physcomitrella patens e_gw1.317.17.1 I 0.665
Bostr.0568s0266 Boechera stricta Bostr.0568s0266 I 0.665
AMTR_s00003p00271440 Amborella trichopoda AMTR_s00003p00271440 I 0.665
AtMYB53 Arabidopsis thaliana AT5G65230 I 0.665
AtMYB53 Arabidopsis lyrata fgenesh2_kg.8__2570__AT5G65230.1 I 0.665
Solyc05g048830.2 Solanum lycopersicum Solyc05g048830.2 I 0.664
PGSC0003DMG400021654 Solanum tuberosum PGSC0003DMG400021654 I 0.664
GSMUA_Achr3G06470_001 Musa acuminata GSMUA_Achr3G06470_001 I 0.664
orange1.1g045434m.g Citrus sinensis orange1.1g045434m.g I 0.663
Ciclev10026023m.g Citrus clementina Ciclev10026023m.g I 0.663
Si017785m.g Setaria italica Si017785m.g I 0.663
mgf024107m Mimulus guttatus mgf024107m I 0.663
Gorai.007G236800 Gossypium raimondii Gorai.007G236800 I 0.663
GSMUA_Achr7G17250_001 Musa acuminata GSMUA_Achr7G17250_001 I 0.662
estExt_gwp_gw1.C_20043 Physcomitrella patens estExt_gwp_gw1.C_20043 I 0.662
Pavir.J34972 Panicum virgatum Pavir.J34972 I 0.662
MDP0000126343 Malus domestica MDP0000126343 I 0.661
MDP0000123873 Malus domestica MDP0000123873 I 0.661
PRUPE_ppa026006mg Prunus persica PRUPE_ppa026006mg I 0.661
SapurV1A.1009s0010 Salix purpurea SapurV1A.1009s0010 I 0.661
Pm004557 Prunus mume Pm004557 I 0.661
Eucgr.K00555 Eucalyptus grandis Eucgr.K00555 I 0.661
SapurV1A.0966s0040 Salix purpurea SapurV1A.0966s0040 I 0.661
POPTR_0005s17080 Populus trichocarpa POPTR_0005s17080 I 0.661