scaffold_303564.1 (Arabidopsis lyrata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 scaffold_303564.1 T279383_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold_303564.1 Myb 18 64
scaffold_303564.1 Myb 70 115

Links

Other Myb/SANT family TFs
Other Arabidopsis lyrata TFs

135 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bostr.7867s1191 Boechera stricta Bostr.7867s1191 I 0.760
ATMYB69 Arabidopsis lyrata fgenesh1_pg.C_scaffold_7000654 I 0.751
Carubv10006783m.g Capsella rubella Carubv10006783m.g I 0.751
Cagra.0844s0037 Capsella grandiflora Cagra.0844s0037 I 0.751
Thhalv10026063m.g Eutrema salsugineum Thhalv10026063m.g I 0.751
ATMYB69 Arabidopsis thaliana AT4G33450 I 0.751
gw1.74.13.1 Physcomitrella patens gw1.74.13.1 I 0.740
Bra034565 Brassica rapa Bra034565 I 0.727
Bo3g170700 Brassica oleracea Bo3g170700 I 0.727
Bra011441 Brassica rapa Bra011441 I 0.727
Bo1g008140 Brassica oleracea Bo1g008140 I 0.727
GSMUA_Achr10G10800_001 Musa acuminata GSMUA_Achr10G10800_001 I 0.725
Cucsa.112050 Cucumis sativus Cucsa.112050 I 0.716
Cla018940 Citrullus lanatus Cla018940 I 0.716
GSMUA_Achr9G29090_001 Musa acuminata GSMUA_Achr9G29090_001 I 0.711
Lus10029746.g Linum usitatissimum Lus10029746.g I 0.710
GSMUA_Achr6G17630_001 Musa acuminata GSMUA_Achr6G17630_001 I 0.707
MLOC_13062 Hordeum vulgare MLOC_13062 I 0.705
Si026751m.g Setaria italica Si026751m.g I 0.705
TRIUR3_35269 Triticum urartu TRIUR3_35269 I 0.705
Traes_4DS_F6E1A4F88 Triticum aestivum Traes_4DS_F6E1A4F88 I 0.705
Traes_4BS_189002AB8 Triticum aestivum Traes_4BS_189002AB8 I 0.705
Traes_4AL_7A841CAD2 Triticum aestivum Traes_4AL_7A841CAD2 I 0.705
BRADI4G22730 Brachypodium distachyon BRADI4G22730 I 0.705
Lus10031326.g Linum usitatissimum Lus10031326.g I 0.703
Lus10031900.g Linum usitatissimum Lus10031900.g I 0.703
POPTR_0005s06410 Populus trichocarpa POPTR_0005s06410 I 0.703
cassava5849.m1 Manihot esculenta cassava5849.m1 I 0.703
30137.m000436 Ricinus communis 30137.m000436 I 0.703
PK01212.1 Cannabis sativa PK01212.1 I 0.702
LjSGA_013423.1 Lotus japonicus LjSGA_013423.1 I 0.701
SapurV1A.0171s0440 Salix purpurea SapurV1A.0171s0440 I 0.698
POPTR_0007s04140 Populus trichocarpa POPTR_0007s04140 I 0.698
Gorai.008G293100 Gossypium raimondii Gorai.008G293100 I 0.689
Eucgr.K01542 Eucalyptus grandis Eucgr.K01542 I 0.689
Ca_04197 Cicer arietinum Ca_04197 I 0.688
Traes_4AL_40E835A94 Triticum aestivum Traes_4AL_40E835A94 I 0.687
F775_03445 Aegilops tauschii F775_03445 I 0.687
Traes_4DS_926486EE0 Triticum aestivum Traes_4DS_926486EE0 I 0.687
Traes_4BS_AAFB56987 Triticum aestivum Traes_4BS_AAFB56987 I 0.687
GSMUA_Achr5G27750_001 Musa acuminata GSMUA_Achr5G27750_001 I 0.687
BRADI1G10470 Brachypodium distachyon BRADI1G10470 I 0.687
cassava9262.m1 Manihot esculenta cassava9262.m1 I 0.684
OB08G23250 Oryza brachyantha OB08G23250 I 0.684
Sb07g021280 Sorghum bicolor Sb07g021280 I 0.684
Ciclev10021859m.g Citrus clementina Ciclev10021859m.g I 0.684
ATMYB52 Vitis vinifera VIT_17s0000g01890 I 0.684
PRUPE_ppa021779mg Prunus persica PRUPE_ppa021779mg I 0.684
BGIOSGA028724 Oryza indica BGIOSGA028724 I 0.684
TCM_013357 Theobroma cacao TCM_013357 I 0.684
BRADI3G36740 Brachypodium distachyon BRADI3G36740 I 0.684
gene09311-v1.0-hybrid Fragaria vesca gene09311-v1.0-hybrid I 0.684
OBART08G15790 Oryza barthii OBART08G15790 I 0.684
GRMZM2G428555 Zea mays GRMZM2G428555 I 0.684
ORGLA08G0138700 Oryza glaberrima ORGLA08G0138700 I 0.684
OGLUM08G16550 Oryza glumaepatula OGLUM08G16550 I 0.684
OPUNC08G13850 Oryza punctata OPUNC08G13850 I 0.684
Pavir.Fa00885 Panicum virgatum Pavir.Fa00885 I 0.684
OMERI08G13100 Oryza meridionalis OMERI08G13100 I 0.684
Pavir.Fb01599 Panicum virgatum Pavir.Fb01599 I 0.684
ONIVA08G17040 Oryza nivara ONIVA08G17040 I 0.684
ORUFI08G17710 Oryza rufipogon ORUFI08G17710 I 0.684
orange1.1g025697m.g Citrus sinensis orange1.1g025697m.g I 0.684
MDP0000265114 Malus domestica MDP0000265114 I 0.684
PK17670.1 Cannabis sativa PK17670.1 I 0.684
OS08G0435700 Oryza sativa OS08G0435700 I 0.684
TCM_001496 Theobroma cacao TCM_001496 I 0.683
evm.TU.contig_27928.1 Carica papaya evm.TU.contig_27928.1 I 0.682
GLYMA09G29940 Glycine max GLYMA09G29940 I 0.681
30000.m000380 Ricinus communis 30000.m000380 I 0.681
mgf018311m Mimulus guttatus mgf018311m I 0.680
Gorai.007G346400 Gossypium raimondii Gorai.007G346400 I 0.680
GSMUA_Achr3G16490_001 Musa acuminata GSMUA_Achr3G16490_001 I 0.680
SapurV1A.0916s0130 Salix purpurea SapurV1A.0916s0130 I 0.679
GSMUA_Achr9G08480_001 Musa acuminata GSMUA_Achr9G08480_001 I 0.679
mg021001m Mimulus guttatus mg021001m I 0.679
SapurV1A.1092s0010 Salix purpurea SapurV1A.1092s0010 I 0.679
orange1.1g047550m.g Citrus sinensis orange1.1g047550m.g I 0.678
Aquca_022_00293 Aquilegia coerulea Aquca_022_00293 I 0.678
Ciclev10011967m.g Citrus clementina Ciclev10011967m.g I 0.678
evm.TU.supercontig_7.125 Carica papaya evm.TU.supercontig_7.125 I 0.677
Pm006483 Prunus mume Pm006483 I 0.677
MLOC_3926 Hordeum vulgare MLOC_3926 I 0.677
PRUPE_ppa025260mg Prunus persica PRUPE_ppa025260mg I 0.677
TRIUR3_29043 Triticum urartu TRIUR3_29043 I 0.677
TRAES3BF142600060CFD_g Triticum aestivum TRAES3BF142600060CFD_g I 0.677
PDK_20s1649141g001 Phoenix dactylifera PDK_20s1649141g001 I 0.676
OMERI11G05160 Oryza meridionalis OMERI11G05160 I 0.675
ONIVA11G06220 Oryza nivara ONIVA11G06220 I 0.675
OPUNC11G06210 Oryza punctata OPUNC11G06210 I 0.675
ORUFI11G06340 Oryza rufipogon ORUFI11G06340 I 0.675
ORGLA11G0056700 Oryza glaberrima ORGLA11G0056700 I 0.675
BGIOSGA034994 Oryza indica BGIOSGA034994 I 0.675
Pavir.J04678 Panicum virgatum Pavir.J04678 I 0.675
LPERR11G05690 Leersia perrieri LPERR11G05690 I 0.675
OGLUM11G05960 Oryza glumaepatula OGLUM11G05960 I 0.675
OS11G0207600 Oryza sativa OS11G0207600 I 0.675
PDK_20s1366461g001 Phoenix dactylifera PDK_20s1366461g001 I 0.674
MLOC_78895 Hordeum vulgare MLOC_78895 I 0.674
Sb05g009460 Sorghum bicolor Sb05g009460 I 0.672
Eucgr.A02150 Eucalyptus grandis Eucgr.A02150 I 0.671
Lus10005683.g Linum usitatissimum Lus10005683.g I 0.669
Cucsa.016540 Cucumis sativus Cucsa.016540 I 0.668
SELMODRAFT_6282 Selaginella moellendorffii SELMODRAFT_6282 I 0.668
Lus10030452.g Linum usitatissimum Lus10030452.g I 0.668
AMTR_s00186p00015620 Amborella trichopoda AMTR_s00186p00015620 I 0.668
Lus10026611.g Linum usitatissimum Lus10026611.g I 0.668
Eucgr.G02492 Eucalyptus grandis Eucgr.G02492 I 0.668
SELMODRAFT_6284 Selaginella moellendorffii SELMODRAFT_6284 I 0.668
Pavir.Cb01957 Panicum virgatum Pavir.Cb01957 I 0.667
LPERR08G13020 Leersia perrieri LPERR08G13020 I 0.667
Thhalv10019669m.g Eutrema salsugineum Thhalv10019669m.g I 0.666
PGSC0003DMG400031044 Solanum tuberosum PGSC0003DMG400031044 I 0.666
Gorai.007G002200 Gossypium raimondii Gorai.007G002200 I 0.666
Bostr.10273s0016 Boechera stricta Bostr.10273s0016 I 0.666
ATMYB54 Arabidopsis thaliana AT1G73410 I 0.666
ATMYB54 Arabidopsis lyrata Al_scaffold_0002_2037 I 0.666
Aquca_002_01251 Aquilegia coerulea Aquca_002_01251 I 0.666
Bra008096 Brassica rapa Bra008096 I 0.666
Bo6g116800 Brassica oleracea Bo6g116800 I 0.666
Cagra.4894s0009 Capsella grandiflora Cagra.4894s0009 I 0.666
Bo2g080540 Brassica oleracea Bo2g080540 I 0.666
Carubv10021434m.g Capsella rubella Carubv10021434m.g I 0.666
Bra015992 Brassica rapa Bra015992 I 0.666
e_gw1.91.11.1 Physcomitrella patens e_gw1.91.11.1 I 0.665
gw1.76.8.1 Physcomitrella patens gw1.76.8.1 I 0.665
gw1.200.30.1 Physcomitrella patens gw1.200.30.1 I 0.665
GSMUA_Achr7G11320_001 Musa acuminata GSMUA_Achr7G11320_001 I 0.664
Pavir.Hb01200 Panicum virgatum Pavir.Hb01200 I 0.663
SELMODRAFT_127613 Selaginella moellendorffii SELMODRAFT_127613 I 0.662
SELMODRAFT_38644 Selaginella moellendorffii SELMODRAFT_38644 I 0.662
SELMODRAFT_8484 Selaginella moellendorffii SELMODRAFT_8484 I 0.662
SELMODRAFT_80553 Selaginella moellendorffii SELMODRAFT_80553 I 0.662
ATMYB69 Vitis vinifera VIT_04s0044g01380 I 0.661
Eucgr.F04277 Eucalyptus grandis Eucgr.F04277 I 0.661