CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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scaffold_303564.1
(
Arabidopsis lyrata
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
scaffold_303564.1
T279383_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold_303564.1
Myb
18
64
RGHWRLVEDENLRKLVVRHGPKNWNFIAQHFKGRSGKSCRLRWYNQL
scaffold_303564.1
Myb
70
115
KRPFTDEEEDRLLKAHAVQGNRWASIARKFPGRTDNAVKNRFHVIV
Links
Other
Myb/SANT
family TFs
Other
Arabidopsis lyrata
TFs
135 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bostr.7867s1191
Boechera stricta
Bostr.7867s1191
I
0.760
ATMYB69
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_7000654
I
0.751
Carubv10006783m.g
Capsella rubella
Carubv10006783m.g
I
0.751
Cagra.0844s0037
Capsella grandiflora
Cagra.0844s0037
I
0.751
Thhalv10026063m.g
Eutrema salsugineum
Thhalv10026063m.g
I
0.751
ATMYB69
Arabidopsis thaliana
AT4G33450
I
0.751
gw1.74.13.1
Physcomitrella patens
gw1.74.13.1
I
0.740
Bra034565
Brassica rapa
Bra034565
I
0.727
Bo3g170700
Brassica oleracea
Bo3g170700
I
0.727
Bra011441
Brassica rapa
Bra011441
I
0.727
Bo1g008140
Brassica oleracea
Bo1g008140
I
0.727
GSMUA_Achr10G10800_001
Musa acuminata
GSMUA_Achr10G10800_001
I
0.725
Cucsa.112050
Cucumis sativus
Cucsa.112050
I
0.716
Cla018940
Citrullus lanatus
Cla018940
I
0.716
GSMUA_Achr9G29090_001
Musa acuminata
GSMUA_Achr9G29090_001
I
0.711
Lus10029746.g
Linum usitatissimum
Lus10029746.g
I
0.710
GSMUA_Achr6G17630_001
Musa acuminata
GSMUA_Achr6G17630_001
I
0.707
MLOC_13062
Hordeum vulgare
MLOC_13062
I
0.705
Si026751m.g
Setaria italica
Si026751m.g
I
0.705
TRIUR3_35269
Triticum urartu
TRIUR3_35269
I
0.705
Traes_4DS_F6E1A4F88
Triticum aestivum
Traes_4DS_F6E1A4F88
I
0.705
Traes_4BS_189002AB8
Triticum aestivum
Traes_4BS_189002AB8
I
0.705
Traes_4AL_7A841CAD2
Triticum aestivum
Traes_4AL_7A841CAD2
I
0.705
BRADI4G22730
Brachypodium distachyon
BRADI4G22730
I
0.705
Lus10031326.g
Linum usitatissimum
Lus10031326.g
I
0.703
Lus10031900.g
Linum usitatissimum
Lus10031900.g
I
0.703
POPTR_0005s06410
Populus trichocarpa
POPTR_0005s06410
I
0.703
cassava5849.m1
Manihot esculenta
cassava5849.m1
I
0.703
30137.m000436
Ricinus communis
30137.m000436
I
0.703
PK01212.1
Cannabis sativa
PK01212.1
I
0.702
LjSGA_013423.1
Lotus japonicus
LjSGA_013423.1
I
0.701
SapurV1A.0171s0440
Salix purpurea
SapurV1A.0171s0440
I
0.698
POPTR_0007s04140
Populus trichocarpa
POPTR_0007s04140
I
0.698
Gorai.008G293100
Gossypium raimondii
Gorai.008G293100
I
0.689
Eucgr.K01542
Eucalyptus grandis
Eucgr.K01542
I
0.689
Ca_04197
Cicer arietinum
Ca_04197
I
0.688
Traes_4AL_40E835A94
Triticum aestivum
Traes_4AL_40E835A94
I
0.687
F775_03445
Aegilops tauschii
F775_03445
I
0.687
Traes_4DS_926486EE0
Triticum aestivum
Traes_4DS_926486EE0
I
0.687
Traes_4BS_AAFB56987
Triticum aestivum
Traes_4BS_AAFB56987
I
0.687
GSMUA_Achr5G27750_001
Musa acuminata
GSMUA_Achr5G27750_001
I
0.687
BRADI1G10470
Brachypodium distachyon
BRADI1G10470
I
0.687
cassava9262.m1
Manihot esculenta
cassava9262.m1
I
0.684
OB08G23250
Oryza brachyantha
OB08G23250
I
0.684
Sb07g021280
Sorghum bicolor
Sb07g021280
I
0.684
Ciclev10021859m.g
Citrus clementina
Ciclev10021859m.g
I
0.684
ATMYB52
Vitis vinifera
VIT_17s0000g01890
I
0.684
PRUPE_ppa021779mg
Prunus persica
PRUPE_ppa021779mg
I
0.684
BGIOSGA028724
Oryza indica
BGIOSGA028724
I
0.684
TCM_013357
Theobroma cacao
TCM_013357
I
0.684
BRADI3G36740
Brachypodium distachyon
BRADI3G36740
I
0.684
gene09311-v1.0-hybrid
Fragaria vesca
gene09311-v1.0-hybrid
I
0.684
OBART08G15790
Oryza barthii
OBART08G15790
I
0.684
GRMZM2G428555
Zea mays
GRMZM2G428555
I
0.684
ORGLA08G0138700
Oryza glaberrima
ORGLA08G0138700
I
0.684
OGLUM08G16550
Oryza glumaepatula
OGLUM08G16550
I
0.684
OPUNC08G13850
Oryza punctata
OPUNC08G13850
I
0.684
Pavir.Fa00885
Panicum virgatum
Pavir.Fa00885
I
0.684
OMERI08G13100
Oryza meridionalis
OMERI08G13100
I
0.684
Pavir.Fb01599
Panicum virgatum
Pavir.Fb01599
I
0.684
ONIVA08G17040
Oryza nivara
ONIVA08G17040
I
0.684
ORUFI08G17710
Oryza rufipogon
ORUFI08G17710
I
0.684
orange1.1g025697m.g
Citrus sinensis
orange1.1g025697m.g
I
0.684
MDP0000265114
Malus domestica
MDP0000265114
I
0.684
PK17670.1
Cannabis sativa
PK17670.1
I
0.684
OS08G0435700
Oryza sativa
OS08G0435700
I
0.684
TCM_001496
Theobroma cacao
TCM_001496
I
0.683
evm.TU.contig_27928.1
Carica papaya
evm.TU.contig_27928.1
I
0.682
GLYMA09G29940
Glycine max
GLYMA09G29940
I
0.681
30000.m000380
Ricinus communis
30000.m000380
I
0.681
mgf018311m
Mimulus guttatus
mgf018311m
I
0.680
Gorai.007G346400
Gossypium raimondii
Gorai.007G346400
I
0.680
GSMUA_Achr3G16490_001
Musa acuminata
GSMUA_Achr3G16490_001
I
0.680
SapurV1A.0916s0130
Salix purpurea
SapurV1A.0916s0130
I
0.679
GSMUA_Achr9G08480_001
Musa acuminata
GSMUA_Achr9G08480_001
I
0.679
mg021001m
Mimulus guttatus
mg021001m
I
0.679
SapurV1A.1092s0010
Salix purpurea
SapurV1A.1092s0010
I
0.679
orange1.1g047550m.g
Citrus sinensis
orange1.1g047550m.g
I
0.678
Aquca_022_00293
Aquilegia coerulea
Aquca_022_00293
I
0.678
Ciclev10011967m.g
Citrus clementina
Ciclev10011967m.g
I
0.678
evm.TU.supercontig_7.125
Carica papaya
evm.TU.supercontig_7.125
I
0.677
Pm006483
Prunus mume
Pm006483
I
0.677
MLOC_3926
Hordeum vulgare
MLOC_3926
I
0.677
PRUPE_ppa025260mg
Prunus persica
PRUPE_ppa025260mg
I
0.677
TRIUR3_29043
Triticum urartu
TRIUR3_29043
I
0.677
TRAES3BF142600060CFD_g
Triticum aestivum
TRAES3BF142600060CFD_g
I
0.677
PDK_20s1649141g001
Phoenix dactylifera
PDK_20s1649141g001
I
0.676
OMERI11G05160
Oryza meridionalis
OMERI11G05160
I
0.675
ONIVA11G06220
Oryza nivara
ONIVA11G06220
I
0.675
OPUNC11G06210
Oryza punctata
OPUNC11G06210
I
0.675
ORUFI11G06340
Oryza rufipogon
ORUFI11G06340
I
0.675
ORGLA11G0056700
Oryza glaberrima
ORGLA11G0056700
I
0.675
BGIOSGA034994
Oryza indica
BGIOSGA034994
I
0.675
Pavir.J04678
Panicum virgatum
Pavir.J04678
I
0.675
LPERR11G05690
Leersia perrieri
LPERR11G05690
I
0.675
OGLUM11G05960
Oryza glumaepatula
OGLUM11G05960
I
0.675
OS11G0207600
Oryza sativa
OS11G0207600
I
0.675
PDK_20s1366461g001
Phoenix dactylifera
PDK_20s1366461g001
I
0.674
MLOC_78895
Hordeum vulgare
MLOC_78895
I
0.674
Sb05g009460
Sorghum bicolor
Sb05g009460
I
0.672
Eucgr.A02150
Eucalyptus grandis
Eucgr.A02150
I
0.671
Lus10005683.g
Linum usitatissimum
Lus10005683.g
I
0.669
Cucsa.016540
Cucumis sativus
Cucsa.016540
I
0.668
SELMODRAFT_6282
Selaginella moellendorffii
SELMODRAFT_6282
I
0.668
Lus10030452.g
Linum usitatissimum
Lus10030452.g
I
0.668
AMTR_s00186p00015620
Amborella trichopoda
AMTR_s00186p00015620
I
0.668
Lus10026611.g
Linum usitatissimum
Lus10026611.g
I
0.668
Eucgr.G02492
Eucalyptus grandis
Eucgr.G02492
I
0.668
SELMODRAFT_6284
Selaginella moellendorffii
SELMODRAFT_6284
I
0.668
Pavir.Cb01957
Panicum virgatum
Pavir.Cb01957
I
0.667
LPERR08G13020
Leersia perrieri
LPERR08G13020
I
0.667
Thhalv10019669m.g
Eutrema salsugineum
Thhalv10019669m.g
I
0.666
PGSC0003DMG400031044
Solanum tuberosum
PGSC0003DMG400031044
I
0.666
Gorai.007G002200
Gossypium raimondii
Gorai.007G002200
I
0.666
Bostr.10273s0016
Boechera stricta
Bostr.10273s0016
I
0.666
ATMYB54
Arabidopsis thaliana
AT1G73410
I
0.666
ATMYB54
Arabidopsis lyrata
Al_scaffold_0002_2037
I
0.666
Aquca_002_01251
Aquilegia coerulea
Aquca_002_01251
I
0.666
Bra008096
Brassica rapa
Bra008096
I
0.666
Bo6g116800
Brassica oleracea
Bo6g116800
I
0.666
Cagra.4894s0009
Capsella grandiflora
Cagra.4894s0009
I
0.666
Bo2g080540
Brassica oleracea
Bo2g080540
I
0.666
Carubv10021434m.g
Capsella rubella
Carubv10021434m.g
I
0.666
Bra015992
Brassica rapa
Bra015992
I
0.666
e_gw1.91.11.1
Physcomitrella patens
e_gw1.91.11.1
I
0.665
gw1.76.8.1
Physcomitrella patens
gw1.76.8.1
I
0.665
gw1.200.30.1
Physcomitrella patens
gw1.200.30.1
I
0.665
GSMUA_Achr7G11320_001
Musa acuminata
GSMUA_Achr7G11320_001
I
0.664
Pavir.Hb01200
Panicum virgatum
Pavir.Hb01200
I
0.663
SELMODRAFT_127613
Selaginella moellendorffii
SELMODRAFT_127613
I
0.662
SELMODRAFT_38644
Selaginella moellendorffii
SELMODRAFT_38644
I
0.662
SELMODRAFT_8484
Selaginella moellendorffii
SELMODRAFT_8484
I
0.662
SELMODRAFT_80553
Selaginella moellendorffii
SELMODRAFT_80553
I
0.662
ATMYB69
Vitis vinifera
VIT_04s0044g01380
I
0.661
Eucgr.F04277
Eucalyptus grandis
Eucgr.F04277
I
0.661