Si001686m.g (Setaria italica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Si001686m.g T279684_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK07741.1
M01277_2.00
Cannabis sativa
HAMCBRHHN

NDDYVGKTD
PBM
Lambert et al.(2019)
pTH11469
0.831 0.871
MYB1
M07068_2.00
Arabidopsis thaliana
HDNNDNHWHWAACSGYHWH

DWDRCSGTTWDWDNHNNHD
Dap-seq
OMalley et al.(2016)
MYB1_col_a
0.754 0.817
OS02G0187700
M02327_2.00
Oryza sativa
NTAMCKGTHN

NDACMGKTAN
PBM
Weirauch et al.(2014)
pTH8645
0.698 0.753
MYB44
M01082_2.00
Arabidopsis thaliana
HAACBRHHN

NDDYVGTTD
PBM
Sullivan et al.(2014)
pTH7078
0.671 0.720
MYB44
M07155_2.00
Arabidopsis thaliana
HDTAACBGWHW

WDWCVGTTAHD
Dap-seq
OMalley et al.(2016)
MYB44_colamp_a
0.671 0.720
MYB44
M07156_2.00
Arabidopsis thaliana
HAACBRWHWWAACBGHHWH

DWDDCVGTTWWDWYVGTTD
Dap-seq
OMalley et al.(2016)
MYB44_col
0.671 0.720
PK28565.1
M02357_2.00
Cannabis sativa
TAACBGTY

RACVGTTA
PBM
Weirauch et al.(2014)
pTH9653
0.662 0.753
AtMYB70
M01071_2.00
Arabidopsis thaliana
HAACBRHHN

NDDYVGTTD
PBM
Sullivan et al.(2014)
pTH8588
0.662 0.742
AtMYB70
M07048_2.00
Arabidopsis thaliana
YAACBGWHWWAAMN

NKTTWWDWCVGTTR
Dap-seq
OMalley et al.(2016)
MYB70_col_a
0.662 0.742
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si001686m Myb 96 142
Si001686m Myb 148 193

Links

Other Myb/SANT family TFs
Other Setaria italica TFs

241 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Sb03g039950 Sorghum bicolor Sb03g039950 I 0.876
GRMZM2G169316 Zea mays GRMZM2G169316 I 0.867
Pavir.Ea03398 Panicum virgatum Pavir.Ea03398 I 0.867
Pavir.J13677 Panicum virgatum Pavir.J13677 I 0.867
Pm018862 Prunus mume Pm018862 I 0.857
Gorai.011G278500 Gossypium raimondii Gorai.011G278500 I 0.846
TCM_042629 Theobroma cacao TCM_042629 I 0.846
MDP0000284922 Malus domestica MDP0000284922 I 0.837
GSMUA_Achr5G28780_001 Musa acuminata GSMUA_Achr5G28780_001 I 0.834
AMTR_s00029p00183640 Amborella trichopoda AMTR_s00029p00183640 I 0.831
PK07741.1 Cannabis sativa PK07741.1 D 0.831
cassava1242.valid.m1 Manihot esculenta cassava1242.valid.m1 I 0.830
GSMUA_Achr9G03720_001 Musa acuminata GSMUA_Achr9G03720_001 I 0.826
MDP0000807341 Malus domestica MDP0000807341 I 0.821
e_gw1.53.214.1 Physcomitrella patens e_gw1.53.214.1 I 0.819
e_gw1.72.10.1 Physcomitrella patens e_gw1.72.10.1 I 0.819
GSMUA_Achr6G33470_001 Musa acuminata GSMUA_Achr6G33470_001 I 0.817
chr2.LjT13M01.180.nd Lotus japonicus chr2.LjT13M01.180.nd I 0.816
Eucgr.J00250 Eucalyptus grandis Eucgr.J00250 I 0.814
Aquca_009_00809 Aquilegia coerulea Aquca_009_00809 I 0.811
evm.TU.supercontig_19.238 Carica papaya evm.TU.supercontig_19.238 I 0.809
SapurV1A.0709s0060 Salix purpurea SapurV1A.0709s0060 I 0.809
Thhalv10021963m.g Eutrema salsugineum Thhalv10021963m.g I 0.805
TRAES3BF039800050CFD_g Triticum aestivum TRAES3BF039800050CFD_g I 0.803
Lus10028250.g Linum usitatissimum Lus10028250.g I 0.798
Lus10040239.g Linum usitatissimum Lus10040239.g I 0.798
VIT_08s0007g01540 Vitis vinifera VIT_08s0007g01540 I 0.794
SapurV1A.0262s0270 Salix purpurea SapurV1A.0262s0270 I 0.792
OMERI01G34370 Oryza meridionalis OMERI01G34370 I 0.792
Cagra.0003s0013 Capsella grandiflora Cagra.0003s0013 I 0.792
Carubv10017397m.g Capsella rubella Carubv10017397m.g I 0.792
ONIVA01G42300 Oryza nivara ONIVA01G42300 I 0.789
OLONG_001357 Oryza longistaminata OLONG_001357 I 0.789
OGLUM01G41330 Oryza glumaepatula OGLUM01G41330 I 0.789
OBART01G37390 Oryza barthii OBART01G37390 I 0.789
ORGLA01G0312200 Oryza glaberrima ORGLA01G0312200 I 0.789
BGIOSGA000485 Oryza indica BGIOSGA000485 I 0.789
ORUFI01G40770 Oryza rufipogon ORUFI01G40770 I 0.789
OS01G0850400 Oryza sativa OS01G0850400 I 0.789
OPUNC01G36300 Oryza punctata OPUNC01G36300 I 0.789
GLYMA14G06870 Glycine max GLYMA14G06870 I 0.787
PK12959.1 Cannabis sativa PK12959.1 I 0.785
PGSC0003DMG400020338 Solanum tuberosum PGSC0003DMG400020338 I 0.784
Solyc09g011780.2 Solanum lycopersicum Solyc09g011780.2 I 0.784
Solyc05g052850.2 Solanum lycopersicum Solyc05g052850.2 I 0.780
MLOC_10322 Hordeum vulgare MLOC_10322 I 0.779
AtMYB1 Arabidopsis lyrata scaffold_301043.1 I 0.775
orange1.1g012494m.g Citrus sinensis orange1.1g012494m.g I 0.773
Ciclev10031463m.g Citrus clementina Ciclev10031463m.g I 0.773
mgf015566m Mimulus guttatus mgf015566m I 0.773
orange1.1g017566m.g Citrus sinensis orange1.1g017566m.g I 0.772
Ciclev10012003m.g Citrus clementina Ciclev10012003m.g I 0.772
GLYMA01G26650 Glycine max GLYMA01G26650 I 0.770
GLYMA02G42030 Glycine max GLYMA02G42030 I 0.768
Cagra.2515s0014 Capsella grandiflora Cagra.2515s0014 I 0.766
Carubv10013882m.g Capsella rubella Carubv10013882m.g I 0.766
Cla018417 Citrullus lanatus Cla018417 I 0.764
Cucsa.066910 Cucumis sativus Cucsa.066910 I 0.764
27798.m000612 Ricinus communis 27798.m000612 I 0.764
MTR_4g019370 Medicago truncatula MTR_4g019370 I 0.764
MYB109 Arabidopsis lyrata fgenesh2_kg.5__1999__AT3G55730.1 I 0.762
Bo3g062160 Brassica oleracea Bo3g062160 I 0.762
gene18756-v1.0-hybrid Fragaria vesca gene18756-v1.0-hybrid I 0.762
GLYMA03G15810 Glycine max GLYMA03G15810 I 0.761
MDP0000478512 Malus domestica MDP0000478512 I 0.761
OB01G46120 Oryza brachyantha OB01G46120 I 0.759
PGSC0003DMG400027190 Solanum tuberosum PGSC0003DMG400027190 I 0.755
MYB1 Arabidopsis thaliana AT3G09230 D 0.754
Eucgr.K03010 Eucalyptus grandis Eucgr.K03010 I 0.753
VIT_13s0019g03200 Vitis vinifera VIT_13s0019g03200 I 0.751
Bostr.22252s0145 Boechera stricta Bostr.22252s0145 I 0.751
SELMODRAFT_77255 Selaginella moellendorffii SELMODRAFT_77255 I 0.750
SELMODRAFT_113522 Selaginella moellendorffii SELMODRAFT_113522 I 0.750
LPERR01G32110 Leersia perrieri LPERR01G32110 I 0.750
Thhalv10010431m.g Eutrema salsugineum Thhalv10010431m.g I 0.748
Bostr.20505s0177 Boechera stricta Bostr.20505s0177 I 0.748
mgf018580m Mimulus guttatus mgf018580m I 0.747
Bra007186 Brassica rapa Bra007186 I 0.747
Gorai.006G179700 Gossypium raimondii Gorai.006G179700 I 0.743
Bo8g090160 Brassica oleracea Bo8g090160 I 0.738
gene20888-v1.0-hybrid Fragaria vesca gene20888-v1.0-hybrid I 0.736
MDP0000319124 Malus domestica MDP0000319124 I 0.734
PRUPE_ppa006851mg Prunus persica PRUPE_ppa006851mg I 0.734
TCM_021796 Theobroma cacao TCM_021796 I 0.734
MDP0000203733 Malus domestica MDP0000203733 I 0.734
Pm002576 Prunus mume Pm002576 I 0.734
gw1.10.6.1 Physcomitrella patens gw1.10.6.1 I 0.731
MYB109 Arabidopsis thaliana AT3G55730 I 0.727
POPTR_0007s10490 Populus trichocarpa POPTR_0007s10490 I 0.722
29801.m003096 Ricinus communis 29801.m003096 I 0.720
cassava7558.valid.m1 Manihot esculenta cassava7558.valid.m1 I 0.718
Bra001323 Brassica rapa Bra001323 I 0.718
POPTR_0009s09890 Populus trichocarpa POPTR_0009s09890 I 0.717
PK16550.1 Cannabis sativa PK16550.1 I 0.716
SapurV1A.0708s0130 Salix purpurea SapurV1A.0708s0130 I 0.713
evm.TU.supercontig_56.79 Carica papaya evm.TU.supercontig_56.79 I 0.712
SELMODRAFT_103999 Selaginella moellendorffii SELMODRAFT_103999 I 0.711
SELMODRAFT_99462 Selaginella moellendorffii SELMODRAFT_99462 I 0.711
GLYMA14G06320 Glycine max GLYMA14G06320 I 0.710
TRIUR3_08319 Triticum urartu TRIUR3_08319 I 0.707
gene26289-v1.0-hybrid Fragaria vesca gene26289-v1.0-hybrid I 0.705
BRADI2G55040 Brachypodium distachyon BRADI2G55040 I 0.705
Bra005006 Brassica rapa Bra005006 I 0.704
Thhalv10016794m.g Eutrema salsugineum Thhalv10016794m.g I 0.703
Ciclev10029124m.g Citrus clementina Ciclev10029124m.g I 0.701
orange1.1g040502m.g Citrus sinensis orange1.1g040502m.g I 0.701
Bra034057 Brassica rapa Bra034057 I 0.699
Bo4g025810 Brassica oleracea Bo4g025810 I 0.699
LPERR02G05810 Leersia perrieri LPERR02G05810 I 0.698
BRADI3G06470 Brachypodium distachyon BRADI3G06470 I 0.698
OPUNC02G05820 Oryza punctata OPUNC02G05820 I 0.698
Pavir.Ab00649 Panicum virgatum Pavir.Ab00649 I 0.698
GRMZM2G145444 Zea mays GRMZM2G145444 I 0.698
Cucsa.244650 Cucumis sativus Cucsa.244650 I 0.698
ONIVA02G08210 Oryza nivara ONIVA02G08210 I 0.698
OGLUM02G06640 Oryza glumaepatula OGLUM02G06640 I 0.698
ORUFI02G06760 Oryza rufipogon ORUFI02G06760 I 0.698
OMERI02G07700 Oryza meridionalis OMERI02G07700 I 0.698
OS02G0187700 Oryza sativa OS02G0187700 D 0.698
Si017917m.g Setaria italica Si017917m.g I 0.698
MLOC_7426 Hordeum vulgare MLOC_7426 I 0.698
ORGLA02G0061500 Oryza glaberrima ORGLA02G0061500 I 0.698
LPERR09G00910 Leersia perrieri LPERR09G00910 I 0.698
Sb04g005940 Sorghum bicolor Sb04g005940 I 0.698
Pavir.J23512 Panicum virgatum Pavir.J23512 I 0.698
Bostr.23794s0078 Boechera stricta Bostr.23794s0078 I 0.696
VIT_03s0180g00210 Vitis vinifera VIT_03s0180g00210 I 0.696
Pavir.Ba03084 Panicum virgatum Pavir.Ba03084 I 0.693
Sb02g013010 Sorghum bicolor Sb02g013010 I 0.693
GRMZM2G050550 Zea mays GRMZM2G050550 I 0.693
Pm021211 Prunus mume Pm021211 I 0.693
Si032789m.g Setaria italica Si032789m.g I 0.693
PRUPE_ppa023154mg Prunus persica PRUPE_ppa023154mg I 0.693
Carubv10023414m.g Capsella rubella Carubv10023414m.g I 0.692
cassava8939.m1 Manihot esculenta cassava8939.m1 I 0.692
Cagra.10445s0001 Capsella grandiflora Cagra.10445s0001 I 0.692
GLYMA02G43280 Glycine max GLYMA02G43280 I 0.691
Ca_12468 Cicer arietinum Ca_12468 I 0.690
OGLUM09G00340 Oryza glumaepatula OGLUM09G00340 I 0.689
OPUNC12G06260 Oryza punctata OPUNC12G06260 I 0.689
ORGLA09G0002900 Oryza glaberrima ORGLA09G0002900 I 0.689
MLOC_64817 Hordeum vulgare MLOC_64817 I 0.689
BGIOSGA030245 Oryza indica BGIOSGA030245 I 0.689
ORUFI09G00360 Oryza rufipogon ORUFI09G00360 I 0.689
OS09G0106700 Oryza sativa OS09G0106700 I 0.689
BRADI4G08220 Brachypodium distachyon BRADI4G08220 I 0.689
OMERI08G05160 Oryza meridionalis OMERI08G05160 I 0.689
Traes_5DL_92CBBE968 Triticum aestivum Traes_5DL_92CBBE968 I 0.689
ONIVA09G00250 Oryza nivara ONIVA09G00250 I 0.689
Traes_5BL_486D0D865 Triticum aestivum Traes_5BL_486D0D865 I 0.689
OBART09G00310 Oryza barthii OBART09G00310 I 0.689
OB09G10200 Oryza brachyantha OB09G10200 I 0.689
Bo1g144680 Brassica oleracea Bo1g144680 I 0.688
GRMZM2G087955 Zea mays GRMZM2G087955 I 0.688
MYB25 Arabidopsis lyrata Al_scaffold_0004_2572 I 0.687
e_gw1.9.342.1 Physcomitrella patens e_gw1.9.342.1 I 0.686
AMTR_s00007p00169630 Amborella trichopoda AMTR_s00007p00169630 I 0.685
Eucgr.E02958 Eucalyptus grandis Eucgr.E02958 I 0.685
Eucgr.H02226 Eucalyptus grandis Eucgr.H02226 I 0.683
Gorai.012G149000 Gossypium raimondii Gorai.012G149000 I 0.683
MLOC_64963 Hordeum vulgare MLOC_64963 I 0.681
Traes_7DL_1FA87027B Triticum aestivum Traes_7DL_1FA87027B I 0.681
GRMZM2G078820 Zea mays GRMZM2G078820 I 0.681
F775_09670 Aegilops tauschii F775_09670 I 0.681
MLOC_63964 Hordeum vulgare MLOC_63964 I 0.681
TRIUR3_25447 Triticum urartu TRIUR3_25447 I 0.681
MTR_6g015455 Medicago truncatula MTR_6g015455 I 0.680
MTR_5g082910 Medicago truncatula MTR_5g082910 I 0.679
BGIOSGA020819 Oryza indica BGIOSGA020819 I 0.677
Sb10g024950 Sorghum bicolor Sb10g024950 I 0.677
ORUFI06G23790 Oryza rufipogon ORUFI06G23790 I 0.677
GRMZM5G803308 Zea mays GRMZM5G803308 I 0.677
OPUNC06G19910 Oryza punctata OPUNC06G19910 I 0.677
Cla013306 Citrullus lanatus Cla013306 I 0.677
Pavir.Da00404 Panicum virgatum Pavir.Da00404 I 0.677
OS06G0637500 Oryza sativa OS06G0637500 I 0.677
LPERR06G18380 Leersia perrieri LPERR06G18380 I 0.677
ORGLA06G0184100 Oryza glaberrima ORGLA06G0184100 I 0.677
OMERI06G22090 Oryza meridionalis OMERI06G22090 I 0.677
Pavir.Db00693 Panicum virgatum Pavir.Db00693 I 0.677
Si006938m.g Setaria italica Si006938m.g I 0.677
ONIVA06G26080 Oryza nivara ONIVA06G26080 I 0.677
OGLUM06G23260 Oryza glumaepatula OGLUM06G23260 I 0.677
GSMUA_Achr1G09750_001 Musa acuminata GSMUA_Achr1G09750_001 I 0.676
evm.TU.supercontig_19.155 Carica papaya evm.TU.supercontig_19.155 I 0.674
SapurV1A.0597s0060 Salix purpurea SapurV1A.0597s0060 I 0.674
GSMUA_AchrUn_randomG01280_001 Musa acuminata GSMUA_AchrUn_randomG01280_001 I 0.672
MDP0000187872 Malus domestica MDP0000187872 I 0.672
Bo7g063830 Brassica oleracea Bo7g063830 I 0.671
Lus10018936.g Linum usitatissimum Lus10018936.g I 0.671
Bo2g167960 Brassica oleracea Bo2g167960 I 0.671
ATMYBR1 Arabidopsis lyrata scaffold_803378.1 I 0.671
Thhalv10004676m.g Eutrema salsugineum Thhalv10004676m.g I 0.671
Bostr.0568s0154 Boechera stricta Bostr.0568s0154 I 0.671
Carubv10027659m.g Capsella rubella Carubv10027659m.g I 0.671
Cagra.0342s0017 Capsella grandiflora Cagra.0342s0017 I 0.671
Bra012149 Brassica rapa Bra012149 I 0.671
MYB44 Arabidopsis thaliana AT5G67300 D 0.671
mgf025567m Mimulus guttatus mgf025567m I 0.671
Lus10014103.g Linum usitatissimum Lus10014103.g I 0.670
Bo7g117880 Brassica oleracea Bo7g117880 I 0.669
Gorai.002G009300 Gossypium raimondii Gorai.002G009300 I 0.669
GSMUA_Achr4G09450_001 Musa acuminata GSMUA_Achr4G09450_001 I 0.669
Aquca_007_00580 Aquilegia coerulea Aquca_007_00580 I 0.669
estExt_fgenesh4_pg.C_10375 Volvox carteri estExt_fgenesh4_pg.C_10375 I 0.669
POPTR_0008s07100 Populus trichocarpa POPTR_0008s07100 I 0.668
Gorai.005G234900 Gossypium raimondii Gorai.005G234900 I 0.666
Aquca_045_00169 Aquilegia coerulea Aquca_045_00169 I 0.665
POPTR_0001s30750 Populus trichocarpa POPTR_0001s30750 I 0.665
PGSC0003DMG400003316 Solanum tuberosum PGSC0003DMG400003316 I 0.664
Solyc04g078420.1 Solanum lycopersicum Solyc04g078420.1 I 0.664
SapurV1A.0525s0230 Salix purpurea SapurV1A.0525s0230 I 0.663
Gorai.010G016800 Gossypium raimondii Gorai.010G016800 I 0.663
GLYMA01G39740 Glycine max GLYMA01G39740 I 0.662
chr2.CM0250.240.nd Lotus japonicus chr2.CM0250.240.nd I 0.662
PGSC0003DMG400024983 Solanum tuberosum PGSC0003DMG400024983 I 0.662
AtMYB70 Arabidopsis thaliana AT2G23290 D 0.662
PK28565.1 Cannabis sativa PK28565.1 D 0.662
PRUPE_ppa008450mg Prunus persica PRUPE_ppa008450mg I 0.662
Gorai.007G218100 Gossypium raimondii Gorai.007G218100 I 0.662
VIT_18s0001g09850 Vitis vinifera VIT_18s0001g09850 I 0.662
Carubv10023692m.g Capsella rubella Carubv10023692m.g I 0.662
Ciclev10026107m.g Citrus clementina Ciclev10026107m.g I 0.662
AtMYB70 Arabidopsis lyrata fgenesh2_kg.4__260__AT2G23290.1 I 0.662
Bostr.27895s0157 Boechera stricta Bostr.27895s0157 I 0.662
29970.m000987 Ricinus communis 29970.m000987 I 0.662
cassava43120.valid.m1 Manihot esculenta cassava43120.valid.m1 I 0.662
Aquca_007_00776 Aquilegia coerulea Aquca_007_00776 I 0.662
cassava2215.valid.m1 Manihot esculenta cassava2215.valid.m1 I 0.662
TCM_000696 Theobroma cacao TCM_000696 I 0.662
evm.TU.supercontig_6.98 Carica papaya evm.TU.supercontig_6.98 I 0.662
Solyc02g092930.1 Solanum lycopersicum Solyc02g092930.1 I 0.662
MDP0000196986 Malus domestica MDP0000196986 I 0.662
MDP0000232454 Malus domestica MDP0000232454 I 0.662
GLYMA11G05550 Glycine max GLYMA11G05550 I 0.662
Lus10030336.g Linum usitatissimum Lus10030336.g I 0.662
Lus10010260.g Linum usitatissimum Lus10010260.g I 0.662
gene24027-v1.0-hybrid Fragaria vesca gene24027-v1.0-hybrid I 0.662
MTR_5g016510 Medicago truncatula MTR_5g016510 I 0.662
Gorai.007G055600 Gossypium raimondii Gorai.007G055600 I 0.662
orange1.1g021071m.g Citrus sinensis orange1.1g021071m.g I 0.662