CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si007889m.g
(
Setaria italica
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Si007889m.g
T279735_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q8RUX5_MAIZE
M11060_2.00
Zea mays
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MRP1_Q2
0.669
0.783
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si007889m
Myb
141
187
RFWTKAEHRLFLRGLQVYGRGNWKSISKYFVTTRTPMQVSSHAQKYF
Links
Other
Myb/SANT
family TFs
Other
Setaria italica
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.J01189
Panicum virgatum
Pavir.J01189
I
0.860
Si032375m.g
Setaria italica
Si032375m.g
N
0.853
Pavir.Ga00772
Panicum virgatum
Pavir.Ga00772
N
0.818
Si008720m.g
Setaria italica
Si008720m.g
N
0.785
Pavir.Da02101
Panicum virgatum
Pavir.Da02101
I
0.772
Sb10g006570
Sorghum bicolor
Sb10g006570
I
0.756
Sb10g009580
Sorghum bicolor
Sb10g009580
I
0.742
GRMZM2G121111
Zea mays
GRMZM2G121111
I
0.742
Sb10g009650
Sorghum bicolor
Sb10g009650
N
0.734
Sb10g007420
Sorghum bicolor
Sb10g007420
N
0.713
OB06G14500
Oryza brachyantha
OB06G14500
N
0.702
Sb01g029290
Sorghum bicolor
Sb01g029290
N
0.701
F775_02244
Aegilops tauschii
F775_02244
I
0.685
GRMZM2G422083
Zea mays
GRMZM2G422083
N
0.673
Sb09g003390
Sorghum bicolor
Sb09g003390
I
0.669
GRMZM2G111306
Zea mays
GRMZM2G111306
I
0.669
Q8RUX5_MAIZE
Zea mays
Q8RUX5_MAIZE
D
0.669
MLOC_54039
Hordeum vulgare
MLOC_54039
I
0.667
Pavir.J00203
Panicum virgatum
Pavir.J00203
N
0.666
OPUNC06G04640
Oryza punctata
OPUNC06G04640
I
0.665