Si018049m.g (Setaria italica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Si018049m.g T279809_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PHL11
M07134_2.00
Arabidopsis thaliana
NNRAAKATTCYHHN

NDDRGAATMTTYNN
Dap-seq
OMalley et al.(2016)
AT5G45580_col_a
0.833 0.872
PHL11
M07135_2.00
Arabidopsis thaliana
NRAAKATTCYHHNN

NNDDRGAATMTTYN
Dap-seq
OMalley et al.(2016)
AT5G45580_colamp_a
0.833 0.872
PHL12
M01077_2.00
Arabidopsis thaliana
NWKATTCBNN

NNVGAATMWN
PBM
Sullivan et al.(2014)
pTH7098
0.780 0.809
AT3G24120
M00729_2.00
Arabidopsis thaliana
NNKATDCBNN

NNVGHATMNN
PBM
Chang et al.(2013)
pTH7086
0.780 0.809
UNE16
M01270_2.00
Arabidopsis thaliana
NWKATTCBNN

NNVGAATMWN
PBM
Lambert et al.(2019)
pTH9967
0.780 0.809
PHL12
M07079_2.00
Arabidopsis thaliana
RGAATATTCYYTWN

NWARRGAATATTCY
Dap-seq
OMalley et al.(2016)
At3g12730_col_a
0.780 0.809
PHL12
M07080_2.00
Arabidopsis thaliana
NNRAAKATTCBHHN

NDDVGAATMTTYNN
Dap-seq
OMalley et al.(2016)
At3g12730_colamp_a
0.780 0.809
AT3G24120
M07085_2.00
Arabidopsis thaliana
HAKATTCB

VGAATMTD
Dap-seq
OMalley et al.(2016)
At3g24120_col_a
0.780 0.809
AT3G24120
M07086_2.00
Arabidopsis thaliana
NDRAAKATTCBHHN

NDDVGAATMTTYHN
Dap-seq
OMalley et al.(2016)
At3g24120_colamp_a
0.780 0.809
MYR1
M02309_2.00
Arabidopsis thaliana
NKATNCBNNN

NNNVGNATMN
PBM
Weirauch et al.(2014)
pTH8859
0.767 0.809
MYR2
M02294_2.00
Arabidopsis thaliana
NKATDCBNN

NNVGHATMN
PBM
Weirauch et al.(2014)
pTH7097
0.760 0.787
MYR2
M07063_2.00
Arabidopsis thaliana
NNDAAKATTCYHHN

NDDRGAATMTTHNN
Dap-seq
OMalley et al.(2016)
At3g04030_col_a
0.760 0.787
MYR2
M07064_2.00
Arabidopsis thaliana
VRAAKATTCBHWNNN

NNNWDVGAATMTTYB
Dap-seq
OMalley et al.(2016)
At3g04030_colamp_a
0.760 0.787
PHL6
M02295_2.00
Arabidopsis thaliana
NNWKATNCBN

NVGNATMWNN
PBM
Weirauch et al.(2014)
pTH7071
0.735 0.745
PHL6
M07083_2.00
Arabidopsis thaliana
NDGAAAACH

DGTTTTCHN
Dap-seq
OMalley et al.(2016)
At3g13040_col_b
0.735 0.745
PHR1
M02329_2.00
Oryza sativa
NWKATNCBNN

NNVGNATMWN
PBM
Weirauch et al.(2014)
pTH7755
0.730 0.766
PHL7
M02292_2.00
Arabidopsis thaliana
NWGATDCBNN

NNVGHATCWN
PBM
Weirauch et al.(2014)
pTH7253
0.729 0.809
PK10342.1
M02351_2.00
Cannabis sativa
WAGATKCS

SGMATCTW
PBM
Weirauch et al.(2014)
pTH9489
0.729 0.809
PHL7
M07040_2.00
Arabidopsis thaliana
DRNAKATTCBNHNNN

NNNDNVGAATMTNYH
Dap-seq
OMalley et al.(2016)
At2g01060_colamp_a
0.729 0.809
PHL7
M07041_2.00
Arabidopsis thaliana
VGAATATTCBNHH

DDNVGAATATTCB
Dap-seq
OMalley et al.(2016)
At2g01060_col
0.729 0.809
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si018049m Myb 28 79

Links

Other Myb/SANT family TFs
Other Setaria italica TFs

881 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R015846 Calypte anna Aan_R015846 N 0.000
Afo_R002527 Aptenodytes forsteri Afo_R002527 N 0.000
Brh_R004714 Buceros rhinoceros Brh_R004714 N 0.000
Cmyd_10017429 Chelonia mydas Cmyd_10017429 N 0.000
NCOA3 Anolis carolinensis ENSACAG00000016334 N 0.000
ENSAMXG00000008788 Astyanax mexicanus ENSAMXG00000008788 N 0.000
NCOA3 Callithrix jacchus ENSCJAG00000016602 N 0.000
ENSCSAG00000014910 Chlorocebus sabaeus ENSCSAG00000014910 N 0.000
ENSFALG00000012895 Ficedula albicollis ENSFALG00000012895 N 0.000
NCOA3 Homo sapiens ENSG00000124151 N 0.000
NCOA3 Gasterosteus aculeatus ENSGACG00000015221 N 0.000
NCOA3 Gallus gallus ENSGALG00000004570 N 0.000
ENSGGOG00000002127 Gorilla gorilla ENSGGOG00000002127 N 0.000
ENSGGOG00000025131 Gorilla gorilla ENSGGOG00000025131 N 0.000
ENSGMOG00000014139 Gadus morhua ENSGMOG00000014139 N 0.000
ENSLACG00000006885 Latimeria chalumnae ENSLACG00000006885 N 0.000
NCOA3 Meleagris gallopavo ENSMGAG00000004414 N 0.000
NCOA3 Microcebus murinus ENSMICG00000006798 N 0.000
NCOA3 Macaca mulatta ENSMMUG00000012020 N 0.000
ENSNLEG00000006923 Nomascus leucogenys ENSNLEG00000006923 N 0.000
NCOA3 Ornithorhynchus anatinus ENSOANG00000012027 N 0.000
ENSONIG00000017075 Oreochromis niloticus ENSONIG00000017075 N 0.000
NCOA3 Oryzias latipes ENSORLG00000012143 N 0.000
ENSPANG00000001325 Papio anubis ENSPANG00000001325 N 0.000
ENSPPYG00000011103 Pongo abelii ENSPPYG00000011103 N 0.000
ENSPSIG00000011898 Pelodiscus sinensis ENSPSIG00000011898 N 0.000
NCOA3 Pan troglodytes ENSPTRG00000013592 N 0.000
NCOA3 Sorex araneus ENSSARG00000005155 N 0.000
NCOA3 Taeniopygia guttata ENSTGUG00000008993 N 0.000
NCOA3 Takifugu rubripes ENSTRUG00000004450 N 0.000
ENSXMAG00000017470 Xiphophorus maculatus ENSXMAG00000017470 N 0.000
Gfo_R009610 Geospiza fortis Gfo_R009610 N 0.000
Tal_R011643 Tyto alba Tal_R011643 N 0.000
ncoa3 Xenopus tropicalis XB-GENE-486618 N 0.000
ncoa3.S Xenopus laevis XB-GENE-865628 N 0.000
XP_002933204 Xenopus tropicalis XP_002933204 N 0.000