Si022959m.g (Setaria italica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Si022959m.g T279834_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK28565.1
M02357_2.00 		Cannabis sativa
TAACBGTY
RACVGTTA		 PBM
Weirauch et al.(2014)
pTH9653 		0.679 0.796
AtMYB70
M01071_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH8588 		0.663 0.774
AtMYB70
M07048_2.00 		Arabidopsis thaliana
YAACBGWHWWAAMN
NKTTWWDWCVGTTR		 Dap-seq
OMalley et al.(2016)
MYB70_col_a 		0.663 0.774
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si022959m Myb 19 65
Si022959m Myb 71 116

Links

Other Myb/SANT family TFs
Other Setaria italica TFs

90 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GRMZM2G369799 Zea mays GRMZM2G369799 I 0.818
Pavir.Cb00156 Panicum virgatum Pavir.Cb00156 I 0.818
Pavir.Ca02945 Panicum virgatum Pavir.Ca02945 I 0.818
OPUNC01G44800 Oryza punctata OPUNC01G44800 N 0.793
ONIVA01G52120 Oryza nivara ONIVA01G52120 N 0.789
OBART01G45880 Oryza barthii OBART01G45880 N 0.789
OGLUM01G50230 Oryza glumaepatula OGLUM01G50230 N 0.789
ORGLA01G0396300 Oryza glaberrima ORGLA01G0396300 N 0.789
OS01G0977300 Oryza sativa OS01G0977300 N 0.789
ORUFI01G49370 Oryza rufipogon ORUFI01G49370 N 0.789
BGIOSGA000003 Oryza indica BGIOSGA000003 N 0.789
Sb0088s002210 Sorghum bicolor Sb0088s002210 N 0.783
OB01G55080 Oryza brachyantha OB01G55080 N 0.782
OLONG_011153 Oryza longistaminata OLONG_011153 N 0.766
Traes_4BL_545A5716E Triticum aestivum Traes_4BL_545A5716E I 0.740
Traes_4DL_D41CB81EA Triticum aestivum Traes_4DL_D41CB81EA I 0.740
Traes_4AS_A79A68739 Triticum aestivum Traes_4AS_A79A68739 N 0.723
Gorai.012G078200 Gossypium raimondii Gorai.012G078200 I 0.717
PRUPE_ppa017892mg Prunus persica PRUPE_ppa017892mg I 0.706
Ciclev10032317m.g Citrus clementina Ciclev10032317m.g I 0.706
orange1.1g046570m.g Citrus sinensis orange1.1g046570m.g I 0.706
Pm018951 Prunus mume Pm018951 I 0.706
chr2.CM0002.110.nc Lotus japonicus chr2.CM0002.110.nc I 0.705
MDP0000298689 Malus domestica MDP0000298689 I 0.704
LPERR01G40230 Leersia perrieri LPERR01G40230 I 0.703
29814.m000736 Ricinus communis 29814.m000736 I 0.699
cassava41257.m1 Manihot esculenta cassava41257.m1 I 0.699
POPTR_0008s07100 Populus trichocarpa POPTR_0008s07100 I 0.699
SapurV1A.0650s0070 Salix purpurea SapurV1A.0650s0070 I 0.699
Aquca_045_00169 Aquilegia coerulea Aquca_045_00169 I 0.697
GSMUA_AchrUn_randomG01280_001 Musa acuminata GSMUA_AchrUn_randomG01280_001 I 0.697
Lus10040940.g Linum usitatissimum Lus10040940.g I 0.695
Lus10028979.g Linum usitatissimum Lus10028979.g I 0.694
Cucsa.368410 Cucumis sativus Cucsa.368410 I 0.687
Eucgr.H02226 Eucalyptus grandis Eucgr.H02226 I 0.686
Lus10007503.g Linum usitatissimum Lus10007503.g I 0.685
Lus10010238.g Linum usitatissimum Lus10010238.g I 0.684
Lus10010055.g Linum usitatissimum Lus10010055.g I 0.684
mgf020432m Mimulus guttatus mgf020432m I 0.682
Thhalv10000438m.g Eutrema salsugineum Thhalv10000438m.g I 0.682
Cla004431 Citrullus lanatus Cla004431 I 0.682
TCM_042474 Theobroma cacao TCM_042474 I 0.680
Ca_12468 Cicer arietinum Ca_12468 I 0.680
GLYMA11G05550 Glycine max GLYMA11G05550 I 0.679
PK28565.1 Cannabis sativa PK28565.1 D 0.679
chr2.CM0250.240.nd Lotus japonicus chr2.CM0250.240.nd I 0.679
Lus10010260.g Linum usitatissimum Lus10010260.g I 0.679
GSMUA_Achr1G09750_001 Musa acuminata GSMUA_Achr1G09750_001 I 0.679
evm.TU.supercontig_6.98 Carica papaya evm.TU.supercontig_6.98 I 0.679
SapurV1A.0708s0130 Salix purpurea SapurV1A.0708s0130 I 0.675
Bra011749 Brassica rapa Bra011749 I 0.674
Bo1g004900 Brassica oleracea Bo1g004900 I 0.674
AMTR_s00006p00225600 Amborella trichopoda AMTR_s00006p00225600 I 0.673
VIT_18s0001g09850 Vitis vinifera VIT_18s0001g09850 I 0.671
GSMUA_Achr4G09450_001 Musa acuminata GSMUA_Achr4G09450_001 I 0.671
gene24027-v1.0-hybrid Fragaria vesca gene24027-v1.0-hybrid I 0.671
gene21001-v1.0-hybrid Fragaria vesca gene21001-v1.0-hybrid I 0.669
MTR_4g094982 Medicago truncatula MTR_4g094982 I 0.668
VIT_13s0067g01360 Vitis vinifera VIT_13s0067g01360 I 0.664
Bostr.27895s0157 Boechera stricta Bostr.27895s0157 I 0.663
SapurV1A.1934s0020 Salix purpurea SapurV1A.1934s0020 I 0.663
SapurV1A.0919s0160 Salix purpurea SapurV1A.0919s0160 I 0.663
AtMYB70 Arabidopsis thaliana AT2G23290 D 0.663
POPTR_0002s12410 Populus trichocarpa POPTR_0002s12410 I 0.663
POPTR_0014s02260 Populus trichocarpa POPTR_0014s02260 I 0.663
AtMYB70 Arabidopsis lyrata fgenesh2_kg.4__260__AT2G23290.1 I 0.663
Carubv10023692m.g Capsella rubella Carubv10023692m.g I 0.663
SapurV1A.0167s0310 Salix purpurea SapurV1A.0167s0310 I 0.663
orange1.1g021071m.g Citrus sinensis orange1.1g021071m.g I 0.662
CM0528.210.nd Lotus japonicus CM0528.210.nd I 0.662
GLYMA05G21220 Glycine max GLYMA05G21220 I 0.662
PK01153.1 Cannabis sativa PK01153.1 I 0.662
GLYMA01G39740 Glycine max GLYMA01G39740 I 0.662
PGSC0003DMG400024983 Solanum tuberosum PGSC0003DMG400024983 I 0.662
cassava43120.valid.m1 Manihot esculenta cassava43120.valid.m1 I 0.662
TCM_000696 Theobroma cacao TCM_000696 I 0.662
Solyc02g092930.1 Solanum lycopersicum Solyc02g092930.1 I 0.662
cassava2215.valid.m1 Manihot esculenta cassava2215.valid.m1 I 0.662
29970.m000987 Ricinus communis 29970.m000987 I 0.662
Ca_02182 Cicer arietinum Ca_02182 I 0.662
VIT_07s0129g01050 Vitis vinifera VIT_07s0129g01050 I 0.662
PRUPE_ppa008450mg Prunus persica PRUPE_ppa008450mg I 0.662
Ciclev10026107m.g Citrus clementina Ciclev10026107m.g I 0.662
Lus10030336.g Linum usitatissimum Lus10030336.g I 0.662
MDP0000196986 Malus domestica MDP0000196986 I 0.662
MTR_5g016510 Medicago truncatula MTR_5g016510 I 0.662
Gorai.007G218100 Gossypium raimondii Gorai.007G218100 I 0.662
POPTR_0005s18620 Populus trichocarpa POPTR_0005s18620 I 0.662
Gorai.007G055600 Gossypium raimondii Gorai.007G055600 I 0.662
MDP0000232454 Malus domestica MDP0000232454 I 0.662