CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc01g009650.1
(
Solanum lycopersicum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Solyc01g009650.1
T280023_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc01g009650.1.1
Myb
17
64
KGLWSPYEDQKLKDYILKHGHVCWASVPINAGLQRTGKSCRLRWINYL
Solyc01g009650.1.1
Myb
70
91
RGTFSTDEEEAILTFHGMLGNK
Links
Other
Myb/SANT
family TFs
Other
Solanum lycopersicum
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SELMODRAFT_84608
Selaginella moellendorffii
SELMODRAFT_84608
N
0.740
OLONG_015294
Oryza longistaminata
OLONG_015294
N
0.740
SELMODRAFT_89380
Selaginella moellendorffii
SELMODRAFT_89380
N
0.740
SELMODRAFT_90153
Selaginella moellendorffii
SELMODRAFT_90153
N
0.740
Gorai.004G118900
Gossypium raimondii
Gorai.004G118900
N
0.734
ORGLA02G0218900
Oryza glaberrima
ORGLA02G0218900
N
0.721
MLOC_18177
Hordeum vulgare
MLOC_18177
I
0.700
30027.m000837
Ricinus communis
30027.m000837
N
0.693
Traes_2BL_216652F6B
Triticum aestivum
Traes_2BL_216652F6B
N
0.676
F775_24174
Aegilops tauschii
F775_24174
N
0.672
Lus10009263.g
Linum usitatissimum
Lus10009263.g
N
0.671
MLOC_53640
Hordeum vulgare
MLOC_53640
I
0.663
SELMODRAFT_39499
Selaginella moellendorffii
SELMODRAFT_39499
N
0.661
SELMODRAFT_39496
Selaginella moellendorffii
SELMODRAFT_39496
N
0.661