Solyc01g102340.2 (Solanum lycopersicum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Solyc01g102340.2 T280038_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB55
M00876_2.00
Arabidopsis thaliana
ACCWAMCD

HGKTWGGT
PBM
Franco-Zorrilla et al.(2014)
MYB55
0.830 0.902
MYB55
M07102_2.00
Arabidopsis thaliana
HNNNHBYAMCWAMCD

HGKTWGKTRVDNNND
Dap-seq
OMalley et al.(2016)
MYB55_colamp_a
0.830 0.902
MYB55
M07103_2.00
Arabidopsis thaliana
NYNYAMCHACCRHH

DDYGGTDGKTRNRN
Dap-seq
OMalley et al.(2016)
MYB55_col
0.830 0.902
MYB61
M07002_2.00
Arabidopsis thaliana
HNYAMCHACCDNHNH

DNDNHGGTDGKTRND
Dap-seq
OMalley et al.(2016)
MYB61_col_a
0.829 0.891
MYB61
M07003_2.00
Arabidopsis thaliana
NHNYACCWAMCDH

DHGKTWGGTRNDN
Dap-seq
OMalley et al.(2016)
MYB61_colamp_a
0.829 0.891
MYB83
M01073_2.00
Arabidopsis thaliana
YACCHACC

GGTDGGTR
PBM
Sullivan et al.(2014)
pTH7140
0.677 0.717
MYB83
M07066_2.00
Arabidopsis thaliana
YCACCAACHNH

DNDGTTGGTGR
Dap-seq
OMalley et al.(2016)
MYB83_col_a
0.677 0.717
MYB83
M07067_2.00
Arabidopsis thaliana
NCACCWAMCDNHNNN

NNNDNHGKTWGGTGN
Dap-seq
OMalley et al.(2016)
MYB83_colamp_a
0.677 0.717
AtMYB17
M07099_2.00
Arabidopsis thaliana
YYYACCWACCWHHHH

DDDDWGGTWGGTRRR
Dap-seq
OMalley et al.(2016)
MYB17_colamp_a
0.669 0.717
MYB92
M07123_2.00
Arabidopsis thaliana
NHHACCTAMY

RKTAGGTDDN
Dap-seq
OMalley et al.(2016)
MYB92_100ng20cy_b
0.668 0.685
MYB92
M07124_2.00
Arabidopsis thaliana
NNNNWNNYYYACCWAMYHH

DDRKTWGGTRRRNNWNNNN
Dap-seq
OMalley et al.(2016)
MYB92_colamp_a
0.668 0.685
MYB107
M07061_2.00
Arabidopsis thaliana
NDDWDBBYYACCWAMYHH

DDRKTWGGTRRVVHWHHN
Dap-seq
OMalley et al.(2016)
MYB107_col_a
0.666 0.696
MYB107
M07062_2.00
Arabidopsis thaliana
WNBYYYACCWAMYH

DRKTWGGTRRRVNW
Dap-seq
OMalley et al.(2016)
MYB107_colamp_a
0.666 0.696
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc01g102340.2.1 Myb 14 61
Solyc01g102340.2.1 Myb 67 111

Links

Other Myb/SANT family TFs
Other Solanum lycopersicum TFs

808 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AB03935.1 Alternaria brassicicola AB03935.1 N 0.000
AB00597.1 Alternaria brassicicola AB00597.1 N 0.000
COCC4DRAFT_124149 Bipolaris maydis COCC4DRAFT_124149 N 0.000
COCC4DRAFT_200873 Bipolaris maydis COCC4DRAFT_200873 N 0.000
COCMIDRAFT_21935 Bipolaris oryzae COCMIDRAFT_21935 N 0.000
COCMIDRAFT_82835 Bipolaris oryzae COCMIDRAFT_82835 N 0.000
COCSADRAFT_40583 Bipolaris sorokiniana COCSADRAFT_40583 N 0.000
COCSADRAFT_155567 Bipolaris sorokiniana COCSADRAFT_155567 N 0.000
COCVIDRAFT_12967 Bipolaris victoriae COCVIDRAFT_12967 N 0.000
COCVIDRAFT_26374 Bipolaris victoriae COCVIDRAFT_26374 N 0.000
COCCADRAFT_99387 Bipolaris zeicola COCCADRAFT_99387 N 0.000
COCCADRAFT_3377 Bipolaris zeicola COCCADRAFT_3377 N 0.000
fgenesh1_pg.C_scaffold_13000086 Cochliobolus heterostrophus C5 fgenesh1_pg.C_scaffold_13000086 N 0.000
estExt_Genewise1Plus.C_20945 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_20945 N 0.000
LEMA_P046620.1 Leptosphaeria maculans LEMA_P046620.1 N 0.000
SNOG_08725 Phaeosphaeria nodorum SNOG_08725 N 0.000
fgenesh1_pg.C_scaffold_3000212 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_3000212 N 0.000
PTT_14925 Pyrenophora teres PTT_14925 N 0.000
PTT_01276 Pyrenophora teres PTT_01276 N 0.000
PTRG_08828 Pyrenophora triticirepentis PTRG_08828 N 0.000
SETTUDRAFT_135369 Setosphaeria turcica SETTUDRAFT_135369 N 0.000
SETTUDRAFT_161746 Setosphaeria turcica SETTUDRAFT_161746 N 0.000
SNOG_08725 Stagonospora nodorum SNOG_08725 N 0.000