Solyc02g064630.2 (Solanum lycopersicum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Solyc02g064630.2 T280044_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TRB2
M02314_2.00
Arabidopsis thaliana
WRMCCTAR

YTAGGKYW
PBM
Weirauch et al.(2014)
pTH7094
0.727 0.809
TRB2
M01083_2.00
Arabidopsis thaliana
HRMCCTAR

YTAGGKYD
PBM
Sullivan et al.(2014)
pTH7260
0.727 0.809
TRB2
M07157_2.00
Arabidopsis thaliana
HHHHHNWWRCCCTAAWHHN

NDDWTTAGGGYWWNDDDDD
Dap-seq
OMalley et al.(2016)
TBP3_col_a
0.727 0.809
TRB2
M07158_2.00
Arabidopsis thaliana
HVDHHHNWARCCCTAAHYH

DRDTTAGGGYTWNDDDHBD
Dap-seq
OMalley et al.(2016)
TBP3_colamp_a
0.727 0.809
PK06103.1
M02348_2.00
Cannabis sativa
TGCCCTAG

CTAGGGCA
PBM
Weirauch et al.(2014)
pTH9649
0.725 0.809
TRB1
M01070_2.00
Arabidopsis thaliana
WRMCCTAR

YTAGGKYW
PBM
Sullivan et al.(2014)
pTH7117
0.715 0.787
OS01G0708000
M02326_2.00
Oryza sativa
WRMCCTAVNN

NNBTAGGKYW
PBM
Weirauch et al.(2014)
pTH8716
0.711 0.787
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc02g064630.2.1 Myb 5 57

Links

Other Myb/SANT family TFs
Other Solanum lycopersicum TFs

Invalid Input OrderBy

209 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action