CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc02g080720.1
(
Solanum lycopersicum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Solyc02g080720.1
T280051_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT1G14600
M01268_2.00
Arabidopsis thaliana
NWAYATTCYN
NRGAATRTWN
PBM
Lambert et al.(2019)
pTH11557
0.697
0.723
AT2G38300
M07056_2.00
Arabidopsis thaliana
WAHATTCYHTH
DADRGAATDTW
Dap-seq
OMalley et al.(2016)
AT2G38300_col_a
0.685
0.702
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc02g080720.1.1
Myb
41
92
RLRWTHDIHRRFVYAVERVGGVDRATPKMVLQIMDVKGLTISHIKSHLQMYK
Links
Other
Myb/SANT
family TFs
Other
Solanum lycopersicum
TFs
177 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Solyc02g080740.1
Solanum lycopersicum
Solyc02g080740.1
N
0.843
VIT_00s1624g00010
Vitis vinifera
VIT_00s1624g00010
I
0.783
Solyc02g080860.1
Solanum lycopersicum
Solyc02g080860.1
I
0.781
Gorai.010G181100
Gossypium raimondii
Gorai.010G181100
I
0.747
OMERI02G06020
Oryza meridionalis
OMERI02G06020
I
0.739
Pavir.J33581
Panicum virgatum
Pavir.J33581
I
0.735
POPTR_0021s00430
Populus trichocarpa
POPTR_0021s00430
I
0.735
Si039234m.g
Setaria italica
Si039234m.g
I
0.735
mgf023762m
Mimulus guttatus
mgf023762m
I
0.730
Lus10001149.g
Linum usitatissimum
Lus10001149.g
I
0.729
Solyc02g080730.1
Solanum lycopersicum
Solyc02g080730.1
I
0.725
Ciclev10005466m.g
Citrus clementina
Ciclev10005466m.g
I
0.725
orange1.1g020303m.g
Citrus sinensis
orange1.1g020303m.g
I
0.725
SapurV1A.0015s0960
Salix purpurea
SapurV1A.0015s0960
I
0.725
Gorai.009G329400
Gossypium raimondii
Gorai.009G329400
I
0.723
VIT_13s0067g01500
Vitis vinifera
VIT_13s0067g01500
I
0.721
Cucsa.277160
Cucumis sativus
Cucsa.277160
I
0.720
ORGLA02G0047700
Oryza glaberrima
ORGLA02G0047700
I
0.719
ONIVA02G05430
Oryza nivara
ONIVA02G05430
I
0.719
MDP0000321302
Malus domestica
MDP0000321302
I
0.719
OS02G0168200
Oryza sativa
OS02G0168200
I
0.719
OPUNC02G04370
Oryza punctata
OPUNC02G04370
I
0.719
ORUFI02G05300
Oryza rufipogon
ORUFI02G05300
I
0.719
MDP0000234120
Malus domestica
MDP0000234120
I
0.719
BGIOSGA007064
Oryza indica
BGIOSGA007064
I
0.719
gene19641-v1.0-hybrid
Fragaria vesca
gene19641-v1.0-hybrid
I
0.718
POPTR_0008s14140
Populus trichocarpa
POPTR_0008s14140
I
0.718
gene00600-v1.0-hybrid
Fragaria vesca
gene00600-v1.0-hybrid
I
0.718
evm.TU.supercontig_2794.2
Carica papaya
evm.TU.supercontig_2794.2
I
0.714
Solyc10g076460.1
Solanum lycopersicum
Solyc10g076460.1
I
0.713
OGLUM02G05030
Oryza glumaepatula
OGLUM02G05030
I
0.713
OLONG_019167
Oryza longistaminata
OLONG_019167
I
0.712
SapurV1A.0203s0150
Salix purpurea
SapurV1A.0203s0150
I
0.707
PRUPE_ppa015662mg
Prunus persica
PRUPE_ppa015662mg
I
0.707
29780.m001368
Ricinus communis
29780.m001368
I
0.707
Aquca_002_01368
Aquilegia coerulea
Aquca_002_01368
I
0.707
Cla017202
Citrullus lanatus
Cla017202
I
0.707
cassava27240.m1
Manihot esculenta
cassava27240.m1
I
0.707
29842.m003572
Ricinus communis
29842.m003572
I
0.707
cassava15362.m1
Manihot esculenta
cassava15362.m1
I
0.707
cassava20298.m1
Manihot esculenta
cassava20298.m1
I
0.707
Eucgr.B02627
Eucalyptus grandis
Eucgr.B02627
I
0.707
GSMUA_Achr11G01510_001
Musa acuminata
GSMUA_Achr11G01510_001
I
0.707
GSMUA_Achr2G11010_001
Musa acuminata
GSMUA_Achr2G11010_001
I
0.707
Gorai.002G169300
Gossypium raimondii
Gorai.002G169300
I
0.707
PK23854.1
Cannabis sativa
PK23854.1
I
0.707
GLYMA09G00685
Glycine max
GLYMA09G00685
I
0.707
GSMUA_Achr5G19200_001
Musa acuminata
GSMUA_Achr5G19200_001
I
0.707
evm.TU.supercontig_2.82
Carica papaya
evm.TU.supercontig_2.82
I
0.707
VIT_01s0137g00050
Vitis vinifera
VIT_01s0137g00050
I
0.707
POPTR_0010s10990
Populus trichocarpa
POPTR_0010s10990
I
0.707
TCM_011166
Theobroma cacao
TCM_011166
I
0.707
Ca_00645
Cicer arietinum
Ca_00645
I
0.707
GLYMA15G11576
Glycine max
GLYMA15G11576
I
0.707
estExt_fgenesh1_pg.C_1660037
Physcomitrella patens
estExt_fgenesh1_pg.C_1660037
I
0.706
AMTR_s00037p00221530
Amborella trichopoda
AMTR_s00037p00221530
I
0.706
Ciclev10018145m.g
Citrus clementina
Ciclev10018145m.g
I
0.704
F775_22605
Aegilops tauschii
F775_22605
I
0.699
MTR_2g023580
Medicago truncatula
MTR_2g023580
I
0.699
OBART02G05200
Oryza barthii
OBART02G05200
I
0.698
AT1G14600
Arabidopsis thaliana
AT1G14600
D
0.697
Bostr.24340s0004
Boechera stricta
Bostr.24340s0004
I
0.697
Carubv10010057m.g
Capsella rubella
Carubv10010057m.g
I
0.697
Bo5g019810
Brassica oleracea
Bo5g019810
I
0.697
Thhalv10008620m.g
Eutrema salsugineum
Thhalv10008620m.g
I
0.697
Cagra.3501s0036
Capsella grandiflora
Cagra.3501s0036
I
0.697
Bra026202
Brassica rapa
Bra026202
I
0.697
fgenesh2_kg.1__1592__AT1G14600.1
Arabidopsis lyrata
fgenesh2_kg.1__1592__AT1G14600.1
I
0.697
Solyc06g051060.2
Solanum lycopersicum
Solyc06g051060.2
I
0.695
Gorai.002G265400
Gossypium raimondii
Gorai.002G265400
I
0.695
Gorai.012G117800
Gossypium raimondii
Gorai.012G117800
I
0.695
GLYMA18G43550
Glycine max
GLYMA18G43550
I
0.695
PK15677.1
Cannabis sativa
PK15677.1
I
0.695
Cucsa.130050
Cucumis sativus
Cucsa.130050
I
0.695
Cla018361
Citrullus lanatus
Cla018361
I
0.695
evm.TU.supercontig_120.33
Carica papaya
evm.TU.supercontig_120.33
I
0.695
gene13487-v1.0-hybrid
Fragaria vesca
gene13487-v1.0-hybrid
I
0.695
PGSC0003DMG400030032
Solanum tuberosum
PGSC0003DMG400030032
I
0.695
Cucsa.045140
Cucumis sativus
Cucsa.045140
I
0.693
LjT01P07.20.nd
Lotus japonicus
LjT01P07.20.nd
I
0.693
Cla014669
Citrullus lanatus
Cla014669
I
0.693
OB06G32040
Oryza brachyantha
OB06G32040
N
0.690
SapurV1A.0354s0280
Salix purpurea
SapurV1A.0354s0280
I
0.690
MDP0000312944
Malus domestica
MDP0000312944
I
0.690
MTR_7g069660
Medicago truncatula
MTR_7g069660
I
0.689
SapurV1A.0566s0220
Salix purpurea
SapurV1A.0566s0220
I
0.689
gene21014-v1.0-hybrid
Fragaria vesca
gene21014-v1.0-hybrid
I
0.689
GLYMA07G18870
Glycine max
GLYMA07G18870
I
0.689
PRUPE_ppa021179mg
Prunus persica
PRUPE_ppa021179mg
I
0.689
MDP0000272003
Malus domestica
MDP0000272003
I
0.689
SapurV1A.0106s0010
Salix purpurea
SapurV1A.0106s0010
I
0.689
Eucgr.J01904
Eucalyptus grandis
Eucgr.J01904
I
0.689
Ca_09400
Cicer arietinum
Ca_09400
I
0.689
TCM_021628
Theobroma cacao
TCM_021628
I
0.689
Pm002861
Prunus mume
Pm002861
I
0.689
GLYMA01G31044
Glycine max
GLYMA01G31044
I
0.688
estExt_fgenesh1_pg.C_550102
Physcomitrella patens
estExt_fgenesh1_pg.C_550102
I
0.688
SELMODRAFT_422768
Selaginella moellendorffii
SELMODRAFT_422768
I
0.688
SELMODRAFT_438636
Selaginella moellendorffii
SELMODRAFT_438636
I
0.688
MDP0000133017
Malus domestica
MDP0000133017
I
0.688
SELMODRAFT_426960
Selaginella moellendorffii
SELMODRAFT_426960
I
0.688
Aquca_004_00431
Aquilegia coerulea
Aquca_004_00431
I
0.688
fgenesh2_pg.scaffold_137000062
Physcomitrella patens
fgenesh2_pg.scaffold_137000062
I
0.688
SELMODRAFT_414222
Selaginella moellendorffii
SELMODRAFT_414222
I
0.688
PGSC0003DMG400026644
Solanum tuberosum
PGSC0003DMG400026644
I
0.688
Solyc09g005030.1
Solanum lycopersicum
Solyc09g005030.1
I
0.688
SapurV1A.3361s0010
Salix purpurea
SapurV1A.3361s0010
I
0.687
TCM_030248
Theobroma cacao
TCM_030248
I
0.687
Ciclev10032941m.g
Citrus clementina
Ciclev10032941m.g
I
0.687
orange1.1g029903m.g
Citrus sinensis
orange1.1g029903m.g
I
0.687
SapurV1A.0429s0100
Salix purpurea
SapurV1A.0429s0100
I
0.687
Thhalv10017090m.g
Eutrema salsugineum
Thhalv10017090m.g
I
0.687
PDK_20s1498711g001
Phoenix dactylifera
PDK_20s1498711g001
I
0.687
POPTR_0004s01060
Populus trichocarpa
POPTR_0004s01060
I
0.687
Carubv10023575m.g
Capsella rubella
Carubv10023575m.g
I
0.685
Bo4g029640
Brassica oleracea
Bo4g029640
I
0.685
fgenesh2_kg.4__1901__AT2G38300.1
Arabidopsis lyrata
fgenesh2_kg.4__1901__AT2G38300.1
I
0.685
Bra005124
Brassica rapa
Bra005124
I
0.685
Thhalv10016890m.g
Eutrema salsugineum
Thhalv10016890m.g
I
0.685
Cagra.4190s0017
Capsella grandiflora
Cagra.4190s0017
I
0.685
Bostr.23794s0245
Boechera stricta
Bostr.23794s0245
I
0.685
AT2G38300
Arabidopsis thaliana
AT2G38300
D
0.685
fgenesh2_pg.scaffold_82000058
Physcomitrella patens
fgenesh2_pg.scaffold_82000058
I
0.682
Sb05g000480
Sorghum bicolor
Sb05g000480
I
0.680
AT2G02060
Arabidopsis thaliana
AT2G02060
I
0.679
Bostr.0556s0031
Boechera stricta
Bostr.0556s0031
I
0.679
MDP0000196504
Malus domestica
MDP0000196504
I
0.679
Bra026618
Brassica rapa
Bra026618
I
0.679
fgenesh2_kg.5__121__AT2G02060.1
Arabidopsis lyrata
fgenesh2_kg.5__121__AT2G02060.1
I
0.679
MDP0000214282
Malus domestica
MDP0000214282
I
0.679
Thhalv10004791m.g
Eutrema salsugineum
Thhalv10004791m.g
I
0.679
Cagra.0549s0004
Capsella grandiflora
Cagra.0549s0004
I
0.679
Carubv10017538m.g
Capsella rubella
Carubv10017538m.g
I
0.679
orange1.1g017464m.g
Citrus sinensis
orange1.1g017464m.g
I
0.675
Ciclev10011992m.g
Citrus clementina
Ciclev10011992m.g
I
0.675
PDK_20s1474441g001
Phoenix dactylifera
PDK_20s1474441g001
I
0.674
Pm009670
Prunus mume
Pm009670
I
0.674
Bo7g080160
Brassica oleracea
Bo7g080160
I
0.673
MDP0000217637
Malus domestica
MDP0000217637
I
0.673
Bra024836
Brassica rapa
Bra024836
I
0.673
Bo2g134900
Brassica oleracea
Bo2g134900
I
0.672
PGSC0003DMG400015893
Solanum tuberosum
PGSC0003DMG400015893
I
0.671
SapurV1A.0067s0500
Salix purpurea
SapurV1A.0067s0500
I
0.671
GLYMA03G06620
Glycine max
GLYMA03G06620
I
0.671
Bo2g104640
Brassica oleracea
Bo2g104640
I
0.669
Carubv10003097m.g
Capsella rubella
Carubv10003097m.g
I
0.669
AT4G04605
Arabidopsis thaliana
AT4G04605
I
0.669
Cagra.4137s0009
Capsella grandiflora
Cagra.4137s0009
I
0.669
Bostr.7199s0006
Boechera stricta
Bostr.7199s0006
I
0.669
Eucgr.K02966
Eucalyptus grandis
Eucgr.K02966
I
0.668
ORGLA12G0000900
Oryza glaberrima
ORGLA12G0000900
I
0.667
Gorai.009G161800
Gossypium raimondii
Gorai.009G161800
I
0.667
OBART12G00180
Oryza barthii
OBART12G00180
I
0.667
mgf019744m
Mimulus guttatus
mgf019744m
I
0.666
Pm010236
Prunus mume
Pm010236
I
0.666
BGIOSGA008790
Oryza indica
BGIOSGA008790
I
0.665
chr5.LjT14K23.60.nc
Lotus japonicus
chr5.LjT14K23.60.nc
I
0.665
GLYMA20G00861
Glycine max
GLYMA20G00861
I
0.665
OMERI02G26760
Oryza meridionalis
OMERI02G26760
I
0.665
OLONG_000346
Oryza longistaminata
OLONG_000346
I
0.665
OGLUM02G28020
Oryza glumaepatula
OGLUM02G28020
I
0.665
ONIVA02G30300
Oryza nivara
ONIVA02G30300
I
0.665
OPUNC02G25130
Oryza punctata
OPUNC02G25130
I
0.665
ORUFI02G28930
Oryza rufipogon
ORUFI02G28930
I
0.665
ORGLA02G0236600
Oryza glaberrima
ORGLA02G0236600
I
0.665
OBART02G27470
Oryza barthii
OBART02G27470
I
0.665
MTR_1g112370
Medicago truncatula
MTR_1g112370
I
0.665
Ca_14800
Cicer arietinum
Ca_14800
I
0.665
Ca_05422
Cicer arietinum
Ca_05422
I
0.665
GLYMA07G19585
Glycine max
GLYMA07G19585
I
0.665
GLYMA20G24290
Glycine max
GLYMA20G24290
I
0.665
MTR_0223s0040
Medicago truncatula
MTR_0223s0040
I
0.665
SapurV1A.0042s0270
Salix purpurea
SapurV1A.0042s0270
I
0.664
orange1.1g041956m.g
Citrus sinensis
orange1.1g041956m.g
I
0.664
Ciclev10029989m.g
Citrus clementina
Ciclev10029989m.g
I
0.664
MDP0000158654
Malus domestica
MDP0000158654
I
0.662
VIT_08s0058g00250
Vitis vinifera
VIT_08s0058g00250
I
0.662