Solyc02g080720.1 (Solanum lycopersicum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Solyc02g080720.1 T280051_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT1G14600
M01268_2.00
Arabidopsis thaliana
NWAYATTCYN

NRGAATRTWN
PBM
Lambert et al.(2019)
pTH11557
0.697 0.723
AT2G38300
M07056_2.00
Arabidopsis thaliana
WAHATTCYHTH

DADRGAATDTW
Dap-seq
OMalley et al.(2016)
AT2G38300_col_a
0.685 0.702
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc02g080720.1.1 Myb 41 92

Links

Other Myb/SANT family TFs
Other Solanum lycopersicum TFs

177 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29780.m001368 Ricinus communis 29780.m001368 I 0.707
29842.m003572 Ricinus communis 29842.m003572 I 0.707
AMTR_s00037p00221530 Amborella trichopoda AMTR_s00037p00221530 I 0.706
Aquca_002_01368 Aquilegia coerulea Aquca_002_01368 I 0.707
Aquca_004_00431 Aquilegia coerulea Aquca_004_00431 I 0.688
AT1G14600 Arabidopsis thaliana AT1G14600 D 0.697
AT2G02060 Arabidopsis thaliana AT2G02060 I 0.679
AT2G38300 Arabidopsis thaliana AT2G38300 D 0.685
AT4G04605 Arabidopsis thaliana AT4G04605 I 0.669
BGIOSGA007064 Oryza indica BGIOSGA007064 I 0.719
BGIOSGA008790 Oryza indica BGIOSGA008790 I 0.665
Bo2g104640 Brassica oleracea Bo2g104640 I 0.669
Bo2g134900 Brassica oleracea Bo2g134900 I 0.672
Bo4g029640 Brassica oleracea Bo4g029640 I 0.685
Bo5g019810 Brassica oleracea Bo5g019810 I 0.697
Bo7g080160 Brassica oleracea Bo7g080160 I 0.673
Bostr.0556s0031 Boechera stricta Bostr.0556s0031 I 0.679
Bostr.23794s0245 Boechera stricta Bostr.23794s0245 I 0.685
Bostr.24340s0004 Boechera stricta Bostr.24340s0004 I 0.697
Bostr.7199s0006 Boechera stricta Bostr.7199s0006 I 0.669
Bra005124 Brassica rapa Bra005124 I 0.685
Bra024836 Brassica rapa Bra024836 I 0.673
Bra026202 Brassica rapa Bra026202 I 0.697
Bra026618 Brassica rapa Bra026618 I 0.679
Cagra.0549s0004 Capsella grandiflora Cagra.0549s0004 I 0.679
Cagra.3501s0036 Capsella grandiflora Cagra.3501s0036 I 0.697
Cagra.4137s0009 Capsella grandiflora Cagra.4137s0009 I 0.669
Cagra.4190s0017 Capsella grandiflora Cagra.4190s0017 I 0.685
Carubv10003097m.g Capsella rubella Carubv10003097m.g I 0.669
Carubv10010057m.g Capsella rubella Carubv10010057m.g I 0.697
Carubv10017538m.g Capsella rubella Carubv10017538m.g I 0.679
Carubv10023575m.g Capsella rubella Carubv10023575m.g I 0.685
cassava15362.m1 Manihot esculenta cassava15362.m1 I 0.707
cassava20298.m1 Manihot esculenta cassava20298.m1 I 0.707
cassava27240.m1 Manihot esculenta cassava27240.m1 I 0.707
Ca_00645 Cicer arietinum Ca_00645 I 0.707
Ca_05422 Cicer arietinum Ca_05422 I 0.665
Ca_09400 Cicer arietinum Ca_09400 I 0.689
Ca_14800 Cicer arietinum Ca_14800 I 0.665
chr5.LjT14K23.60.nc Lotus japonicus chr5.LjT14K23.60.nc I 0.665
Ciclev10005466m.g Citrus clementina Ciclev10005466m.g I 0.725
Ciclev10011992m.g Citrus clementina Ciclev10011992m.g I 0.675
Ciclev10018145m.g Citrus clementina Ciclev10018145m.g I 0.704
Ciclev10029989m.g Citrus clementina Ciclev10029989m.g I 0.664
Ciclev10032941m.g Citrus clementina Ciclev10032941m.g I 0.687
Cla014669 Citrullus lanatus Cla014669 I 0.693
Cla017202 Citrullus lanatus Cla017202 I 0.707
Cla018361 Citrullus lanatus Cla018361 I 0.695
Cucsa.045140 Cucumis sativus Cucsa.045140 I 0.693
Cucsa.130050 Cucumis sativus Cucsa.130050 I 0.695
Cucsa.277160 Cucumis sativus Cucsa.277160 I 0.720
estExt_fgenesh1_pg.C_1660037 Physcomitrella patens estExt_fgenesh1_pg.C_1660037 I 0.706
estExt_fgenesh1_pg.C_550102 Physcomitrella patens estExt_fgenesh1_pg.C_550102 I 0.688
Eucgr.B02627 Eucalyptus grandis Eucgr.B02627 I 0.707
Eucgr.J01904 Eucalyptus grandis Eucgr.J01904 I 0.689
Eucgr.K02966 Eucalyptus grandis Eucgr.K02966 I 0.668
evm.TU.supercontig_120.33 Carica papaya evm.TU.supercontig_120.33 I 0.695
evm.TU.supercontig_2.82 Carica papaya evm.TU.supercontig_2.82 I 0.707
evm.TU.supercontig_2794.2 Carica papaya evm.TU.supercontig_2794.2 I 0.714
F775_22605 Aegilops tauschii F775_22605 I 0.699
fgenesh2_kg.1__1592__AT1G14600.1 Arabidopsis lyrata fgenesh2_kg.1__1592__AT1G14600.1 I 0.697
fgenesh2_kg.4__1901__AT2G38300.1 Arabidopsis lyrata fgenesh2_kg.4__1901__AT2G38300.1 I 0.685
fgenesh2_kg.5__121__AT2G02060.1 Arabidopsis lyrata fgenesh2_kg.5__121__AT2G02060.1 I 0.679
fgenesh2_pg.scaffold_137000062 Physcomitrella patens fgenesh2_pg.scaffold_137000062 I 0.688
fgenesh2_pg.scaffold_82000058 Physcomitrella patens fgenesh2_pg.scaffold_82000058 I 0.682
gene00600-v1.0-hybrid Fragaria vesca gene00600-v1.0-hybrid I 0.718
gene13487-v1.0-hybrid Fragaria vesca gene13487-v1.0-hybrid I 0.695
gene19641-v1.0-hybrid Fragaria vesca gene19641-v1.0-hybrid I 0.718
gene21014-v1.0-hybrid Fragaria vesca gene21014-v1.0-hybrid I 0.689
GLYMA01G31044 Glycine max GLYMA01G31044 I 0.688
GLYMA03G06620 Glycine max GLYMA03G06620 I 0.671
GLYMA07G18870 Glycine max GLYMA07G18870 I 0.689
GLYMA07G19585 Glycine max GLYMA07G19585 I 0.665
GLYMA09G00685 Glycine max GLYMA09G00685 I 0.707
GLYMA15G11576 Glycine max GLYMA15G11576 I 0.707
GLYMA18G43550 Glycine max GLYMA18G43550 I 0.695
GLYMA20G00861 Glycine max GLYMA20G00861 I 0.665
GLYMA20G24290 Glycine max GLYMA20G24290 I 0.665
Gorai.002G169300 Gossypium raimondii Gorai.002G169300 I 0.707
Gorai.002G265400 Gossypium raimondii Gorai.002G265400 I 0.695
Gorai.009G161800 Gossypium raimondii Gorai.009G161800 I 0.667
Gorai.009G329400 Gossypium raimondii Gorai.009G329400 I 0.723
Gorai.010G181100 Gossypium raimondii Gorai.010G181100 I 0.747
Gorai.012G117800 Gossypium raimondii Gorai.012G117800 I 0.695
GSMUA_Achr11G01510_001 Musa acuminata GSMUA_Achr11G01510_001 I 0.707
GSMUA_Achr2G11010_001 Musa acuminata GSMUA_Achr2G11010_001 I 0.707
GSMUA_Achr5G19200_001 Musa acuminata GSMUA_Achr5G19200_001 I 0.707
LjT01P07.20.nd Lotus japonicus LjT01P07.20.nd I 0.693
Lus10001149.g Linum usitatissimum Lus10001149.g I 0.729
MDP0000133017 Malus domestica MDP0000133017 I 0.688
MDP0000158654 Malus domestica MDP0000158654 I 0.662
MDP0000196504 Malus domestica MDP0000196504 I 0.679
MDP0000214282 Malus domestica MDP0000214282 I 0.679
MDP0000217637 Malus domestica MDP0000217637 I 0.673
MDP0000234120 Malus domestica MDP0000234120 I 0.719
MDP0000272003 Malus domestica MDP0000272003 I 0.689
MDP0000312944 Malus domestica MDP0000312944 I 0.690
MDP0000321302 Malus domestica MDP0000321302 I 0.719
mgf019744m Mimulus guttatus mgf019744m I 0.666
mgf023762m Mimulus guttatus mgf023762m I 0.730
MTR_0223s0040 Medicago truncatula MTR_0223s0040 I 0.665
MTR_1g112370 Medicago truncatula MTR_1g112370 I 0.665
MTR_2g023580 Medicago truncatula MTR_2g023580 I 0.699
MTR_7g069660 Medicago truncatula MTR_7g069660 I 0.689
OB06G32040 Oryza brachyantha OB06G32040 N 0.690
OBART02G05200 Oryza barthii OBART02G05200 I 0.698
OBART02G27470 Oryza barthii OBART02G27470 I 0.665
OBART12G00180 Oryza barthii OBART12G00180 I 0.667
OGLUM02G05030 Oryza glumaepatula OGLUM02G05030 I 0.713
OGLUM02G28020 Oryza glumaepatula OGLUM02G28020 I 0.665
OLONG_000346 Oryza longistaminata OLONG_000346 I 0.665
OLONG_019167 Oryza longistaminata OLONG_019167 I 0.712
OMERI02G06020 Oryza meridionalis OMERI02G06020 I 0.739
OMERI02G26760 Oryza meridionalis OMERI02G26760 I 0.665
ONIVA02G05430 Oryza nivara ONIVA02G05430 I 0.719
ONIVA02G30300 Oryza nivara ONIVA02G30300 I 0.665
OPUNC02G04370 Oryza punctata OPUNC02G04370 I 0.719
OPUNC02G25130 Oryza punctata OPUNC02G25130 I 0.665
orange1.1g017464m.g Citrus sinensis orange1.1g017464m.g I 0.675
orange1.1g020303m.g Citrus sinensis orange1.1g020303m.g I 0.725
orange1.1g029903m.g Citrus sinensis orange1.1g029903m.g I 0.687
orange1.1g041956m.g Citrus sinensis orange1.1g041956m.g I 0.664
ORGLA02G0047700 Oryza glaberrima ORGLA02G0047700 I 0.719
ORGLA02G0236600 Oryza glaberrima ORGLA02G0236600 I 0.665
ORGLA12G0000900 Oryza glaberrima ORGLA12G0000900 I 0.667
ORUFI02G05300 Oryza rufipogon ORUFI02G05300 I 0.719
ORUFI02G28930 Oryza rufipogon ORUFI02G28930 I 0.665
OS02G0168200 Oryza sativa OS02G0168200 I 0.719
Pavir.J33581 Panicum virgatum Pavir.J33581 I 0.735
PDK_20s1474441g001 Phoenix dactylifera PDK_20s1474441g001 I 0.674
PDK_20s1498711g001 Phoenix dactylifera PDK_20s1498711g001 I 0.687
PGSC0003DMG400015893 Solanum tuberosum PGSC0003DMG400015893 I 0.671
PGSC0003DMG400026644 Solanum tuberosum PGSC0003DMG400026644 I 0.688
PGSC0003DMG400030032 Solanum tuberosum PGSC0003DMG400030032 I 0.695
PK15677.1 Cannabis sativa PK15677.1 I 0.695
PK23854.1 Cannabis sativa PK23854.1 I 0.707
Pm002861 Prunus mume Pm002861 I 0.689
Pm009670 Prunus mume Pm009670 I 0.674
Pm010236 Prunus mume Pm010236 I 0.666
POPTR_0004s01060 Populus trichocarpa POPTR_0004s01060 I 0.687
POPTR_0008s14140 Populus trichocarpa POPTR_0008s14140 I 0.718
POPTR_0010s10990 Populus trichocarpa POPTR_0010s10990 I 0.707
POPTR_0021s00430 Populus trichocarpa POPTR_0021s00430 I 0.735
PRUPE_ppa015662mg Prunus persica PRUPE_ppa015662mg I 0.707
PRUPE_ppa021179mg Prunus persica PRUPE_ppa021179mg I 0.689
SapurV1A.0015s0960 Salix purpurea SapurV1A.0015s0960 I 0.725
SapurV1A.0042s0270 Salix purpurea SapurV1A.0042s0270 I 0.664
SapurV1A.0067s0500 Salix purpurea SapurV1A.0067s0500 I 0.671
SapurV1A.0106s0010 Salix purpurea SapurV1A.0106s0010 I 0.689
SapurV1A.0203s0150 Salix purpurea SapurV1A.0203s0150 I 0.707
SapurV1A.0354s0280 Salix purpurea SapurV1A.0354s0280 I 0.690
SapurV1A.0429s0100 Salix purpurea SapurV1A.0429s0100 I 0.687
SapurV1A.0566s0220 Salix purpurea SapurV1A.0566s0220 I 0.689
SapurV1A.3361s0010 Salix purpurea SapurV1A.3361s0010 I 0.687
Sb05g000480 Sorghum bicolor Sb05g000480 I 0.680
SELMODRAFT_414222 Selaginella moellendorffii SELMODRAFT_414222 I 0.688
SELMODRAFT_422768 Selaginella moellendorffii SELMODRAFT_422768 I 0.688
SELMODRAFT_426960 Selaginella moellendorffii SELMODRAFT_426960 I 0.688
SELMODRAFT_438636 Selaginella moellendorffii SELMODRAFT_438636 I 0.688
Si039234m.g Setaria italica Si039234m.g I 0.735
Solyc02g080730.1 Solanum lycopersicum Solyc02g080730.1 I 0.725
Solyc02g080740.1 Solanum lycopersicum Solyc02g080740.1 N 0.843
Solyc02g080860.1 Solanum lycopersicum Solyc02g080860.1 I 0.781
Solyc06g051060.2 Solanum lycopersicum Solyc06g051060.2 I 0.695
Solyc09g005030.1 Solanum lycopersicum Solyc09g005030.1 I 0.688
Solyc10g076460.1 Solanum lycopersicum Solyc10g076460.1 I 0.713
TCM_011166 Theobroma cacao TCM_011166 I 0.707
TCM_021628 Theobroma cacao TCM_021628 I 0.689
TCM_030248 Theobroma cacao TCM_030248 I 0.687
Thhalv10004791m.g Eutrema salsugineum Thhalv10004791m.g I 0.679
Thhalv10008620m.g Eutrema salsugineum Thhalv10008620m.g I 0.697
Thhalv10016890m.g Eutrema salsugineum Thhalv10016890m.g I 0.685
Thhalv10017090m.g Eutrema salsugineum Thhalv10017090m.g I 0.687
VIT_00s1624g00010 Vitis vinifera VIT_00s1624g00010 I 0.783
VIT_01s0137g00050 Vitis vinifera VIT_01s0137g00050 I 0.707
VIT_08s0058g00250 Vitis vinifera VIT_08s0058g00250 I 0.662
VIT_13s0067g01500 Vitis vinifera VIT_13s0067g01500 I 0.721