CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc04g079360.1
(
Solanum lycopersicum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Solyc04g079360.1
T280114_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
OS02G0187700
M02327_2.00
Oryza sativa
NTAMCKGTHN
NDACMGKTAN
PBM
Weirauch et al.(2014)
pTH8645
0.740
0.763
MYB1
M07068_2.00
Arabidopsis thaliana
HDNNDNHWHWAACSGYHWH
DWDRCSGTTWDWDNHNNHD
Dap-seq
OMalley et al.(2016)
MYB1_col_a
0.707
0.710
PK07741.1
M01277_2.00
Cannabis sativa
HAMCBRHHN
NDDYVGKTD
PBM
Lambert et al.(2019)
pTH11469
0.675
0.720
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc04g079360.1.1
Myb
35
81
KGPWSAEEDKILTKLVERYGARNWSLISKYIKGRSGKSCRLRWCNQL
Solyc04g079360.1.1
Myb
87
132
HRPFSPAEDEAILAAHAKYGNRWATIARLLPGRTDNAVKNHWNSTL
Links
Other
Myb/SANT
family TFs
Other
Solanum lycopersicum
TFs
207 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGSC0003DMG400007994
Solanum tuberosum
PGSC0003DMG400007994
I
0.909
mgf006151m
Mimulus guttatus
mgf006151m
I
0.883
Cucsa.232630
Cucumis sativus
Cucsa.232630
I
0.841
Cla022889
Citrullus lanatus
Cla022889
I
0.841
TCM_033907
Theobroma cacao
TCM_033907
I
0.837
PK29071.1
Cannabis sativa
PK29071.1
I
0.824
mgf003084m
Mimulus guttatus
mgf003084m
I
0.820
Cucsa.123440
Cucumis sativus
Cucsa.123440
I
0.804
POPTR_0002s13030
Populus trichocarpa
POPTR_0002s13030
I
0.797
evm.TU.supercontig_376.4
Carica papaya
evm.TU.supercontig_376.4
I
0.797
Gorai.010G016800
Gossypium raimondii
Gorai.010G016800
I
0.796
MTR_3g101290
Medicago truncatula
MTR_3g101290
I
0.791
orange1.1g025351m.g
Citrus sinensis
orange1.1g025351m.g
I
0.788
cassava16103.m1
Manihot esculenta
cassava16103.m1
I
0.788
30170.m013927
Ricinus communis
30170.m013927
I
0.788
Ciclev10002239m.g
Citrus clementina
Ciclev10002239m.g
I
0.788
SapurV1A.0525s0230
Salix purpurea
SapurV1A.0525s0230
I
0.787
gene09039-v1.0-hybrid
Fragaria vesca
gene09039-v1.0-hybrid
I
0.780
Cla021015
Citrullus lanatus
Cla021015
I
0.780
VIT_18s0001g11170
Vitis vinifera
VIT_18s0001g11170
I
0.775
Gorai.009G208900
Gossypium raimondii
Gorai.009G208900
I
0.771
SapurV1A.0017s0390
Salix purpurea
SapurV1A.0017s0390
I
0.768
GLYMA06G04010
Glycine max
GLYMA06G04010
I
0.768
POPTR_0014s03440
Populus trichocarpa
POPTR_0014s03440
I
0.767
cassava46434.m1
Manihot esculenta
cassava46434.m1
I
0.766
Ca_01522
Cicer arietinum
Ca_01522
I
0.764
Aquca_007_00580
Aquilegia coerulea
Aquca_007_00580
I
0.764
LPERR02G05810
Leersia perrieri
LPERR02G05810
I
0.758
Pavir.Ab00649
Panicum virgatum
Pavir.Ab00649
I
0.758
Si017917m.g
Setaria italica
Si017917m.g
I
0.758
Sb04g005940
Sorghum bicolor
Sb04g005940
I
0.758
GRMZM2G145444
Zea mays
GRMZM2G145444
I
0.758
Pavir.J23512
Panicum virgatum
Pavir.J23512
I
0.758
MDP0000894463
Malus domestica
MDP0000894463
I
0.755
Pm005220
Prunus mume
Pm005220
I
0.755
PRUPE_ppa010735mg
Prunus persica
PRUPE_ppa010735mg
I
0.755
GLYMA04G03910
Glycine max
GLYMA04G03910
I
0.747
BRADI4G08220
Brachypodium distachyon
BRADI4G08220
I
0.742
Eucgr.F00031
Eucalyptus grandis
Eucgr.F00031
I
0.742
Eucgr.F02372
Eucalyptus grandis
Eucgr.F02372
I
0.742
Gorai.012G149000
Gossypium raimondii
Gorai.012G149000
I
0.742
GRMZM2G087955
Zea mays
GRMZM2G087955
I
0.741
OPUNC02G05820
Oryza punctata
OPUNC02G05820
I
0.740
ONIVA02G08210
Oryza nivara
ONIVA02G08210
I
0.740
OS02G0187700
Oryza sativa
OS02G0187700
D
0.740
ORUFI02G06760
Oryza rufipogon
ORUFI02G06760
I
0.740
OGLUM02G06640
Oryza glumaepatula
OGLUM02G06640
I
0.740
ORGLA02G0061500
Oryza glaberrima
ORGLA02G0061500
I
0.740
OMERI02G07700
Oryza meridionalis
OMERI02G07700
I
0.740
MLOC_7426
Hordeum vulgare
MLOC_7426
I
0.740
VIT_03s0180g00210
Vitis vinifera
VIT_03s0180g00210
I
0.739
Eucgr.E02958
Eucalyptus grandis
Eucgr.E02958
I
0.739
Lus10014103.g
Linum usitatissimum
Lus10014103.g
I
0.738
cassava7558.valid.m1
Manihot esculenta
cassava7558.valid.m1
I
0.730
Lus10021762.g
Linum usitatissimum
Lus10021762.g
I
0.730
MDP0000823270
Malus domestica
MDP0000823270
I
0.729
MDP0000784297
Malus domestica
MDP0000784297
I
0.729
MDP0000480596
Malus domestica
MDP0000480596
I
0.729
MDP0000477900
Malus domestica
MDP0000477900
I
0.729
MDP0000641708
Malus domestica
MDP0000641708
I
0.729
Lus10032764.g
Linum usitatissimum
Lus10032764.g
I
0.727
ORUFI09G00360
Oryza rufipogon
ORUFI09G00360
I
0.726
Traes_5BL_486D0D865
Triticum aestivum
Traes_5BL_486D0D865
I
0.726
Traes_5DL_92CBBE968
Triticum aestivum
Traes_5DL_92CBBE968
I
0.726
BGIOSGA030245
Oryza indica
BGIOSGA030245
I
0.726
OS09G0106700
Oryza sativa
OS09G0106700
I
0.726
OGLUM09G00340
Oryza glumaepatula
OGLUM09G00340
I
0.726
OBART09G00310
Oryza barthii
OBART09G00310
I
0.726
ORGLA09G0002900
Oryza glaberrima
ORGLA09G0002900
I
0.726
MLOC_64817
Hordeum vulgare
MLOC_64817
I
0.726
LPERR09G00910
Leersia perrieri
LPERR09G00910
I
0.726
OMERI08G05160
Oryza meridionalis
OMERI08G05160
I
0.726
OB09G10200
Oryza brachyantha
OB09G10200
I
0.726
cassava8939.m1
Manihot esculenta
cassava8939.m1
I
0.726
OPUNC12G06260
Oryza punctata
OPUNC12G06260
I
0.726
ONIVA09G00250
Oryza nivara
ONIVA09G00250
I
0.726
29801.m003096
Ricinus communis
29801.m003096
I
0.725
gene26289-v1.0-hybrid
Fragaria vesca
gene26289-v1.0-hybrid
I
0.722
Si032789m.g
Setaria italica
Si032789m.g
I
0.721
Sb10g024950
Sorghum bicolor
Sb10g024950
I
0.721
Sb02g013010
Sorghum bicolor
Sb02g013010
I
0.721
Pavir.Ba03084
Panicum virgatum
Pavir.Ba03084
I
0.721
mgf025567m
Mimulus guttatus
mgf025567m
I
0.720
MDP0000187872
Malus domestica
MDP0000187872
I
0.720
AMTR_s00007p00169630
Amborella trichopoda
AMTR_s00007p00169630
I
0.717
Ciclev10029124m.g
Citrus clementina
Ciclev10029124m.g
I
0.716
orange1.1g040502m.g
Citrus sinensis
orange1.1g040502m.g
I
0.716
BRADI3G06470
Brachypodium distachyon
BRADI3G06470
I
0.716
Pm021211
Prunus mume
Pm021211
I
0.711
PRUPE_ppa023154mg
Prunus persica
PRUPE_ppa023154mg
I
0.711
Gorai.009G275100
Gossypium raimondii
Gorai.009G275100
I
0.709
MYB1
Arabidopsis thaliana
AT3G09230
D
0.707
GLYMA14G09540
Glycine max
GLYMA14G09540
I
0.705
GSMUA_Achr1G26140_001
Musa acuminata
GSMUA_Achr1G26140_001
I
0.705
GLYMA17G36370
Glycine max
GLYMA17G36370
I
0.705
PK16550.1
Cannabis sativa
PK16550.1
I
0.705
Pavir.Da00404
Panicum virgatum
Pavir.Da00404
I
0.704
gw1.10.6.1
Physcomitrella patens
gw1.10.6.1
I
0.704
GRMZM5G803308
Zea mays
GRMZM5G803308
I
0.704
Pavir.Db00693
Panicum virgatum
Pavir.Db00693
I
0.704
GRMZM2G050550
Zea mays
GRMZM2G050550
I
0.704
Si006938m.g
Setaria italica
Si006938m.g
I
0.704
MTR_6g015455
Medicago truncatula
MTR_6g015455
I
0.703
PGSC0003DMG400020338
Solanum tuberosum
PGSC0003DMG400020338
I
0.703
Solyc09g011780.2
Solanum lycopersicum
Solyc09g011780.2
I
0.703
GLYMA01G26650
Glycine max
GLYMA01G26650
I
0.700
Pm002576
Prunus mume
Pm002576
I
0.700
27798.m000612
Ricinus communis
27798.m000612
I
0.700
Cucsa.066910
Cucumis sativus
Cucsa.066910
I
0.700
Gorai.006G179700
Gossypium raimondii
Gorai.006G179700
I
0.700
PRUPE_ppa006851mg
Prunus persica
PRUPE_ppa006851mg
I
0.700
GLYMA03G15810
Glycine max
GLYMA03G15810
I
0.700
TCM_021796
Theobroma cacao
TCM_021796
I
0.700
Cla018417
Citrullus lanatus
Cla018417
I
0.700
MTR_4g019370
Medicago truncatula
MTR_4g019370
I
0.700
GRMZM2G078820
Zea mays
GRMZM2G078820
I
0.699
PGSC0003DMG400027190
Solanum tuberosum
PGSC0003DMG400027190
I
0.699
GSMUA_Achr4G20150_001
Musa acuminata
GSMUA_Achr4G20150_001
I
0.697
GSMUA_Achr3G13070_001
Musa acuminata
GSMUA_Achr3G13070_001
I
0.697
SELMODRAFT_99462
Selaginella moellendorffii
SELMODRAFT_99462
I
0.695
SELMODRAFT_103999
Selaginella moellendorffii
SELMODRAFT_103999
I
0.695
mgf002573m
Mimulus guttatus
mgf002573m
I
0.693
POPTR_0007s10490
Populus trichocarpa
POPTR_0007s10490
I
0.693
mgf023922m
Mimulus guttatus
mgf023922m
I
0.692
Eucgr.F00002
Eucalyptus grandis
Eucgr.F00002
I
0.692
e_gw1.53.214.1
Physcomitrella patens
e_gw1.53.214.1
I
0.691
e_gw1.72.10.1
Physcomitrella patens
e_gw1.72.10.1
I
0.691
GLYMA14G06320
Glycine max
GLYMA14G06320
I
0.688
GLYMA02G43280
Glycine max
GLYMA02G43280
I
0.688
MTR_5g082910
Medicago truncatula
MTR_5g082910
I
0.688
Aquca_083_00054
Aquilegia coerulea
Aquca_083_00054
I
0.687
GLYMA17G35620
Glycine max
GLYMA17G35620
I
0.687
Cla022947
Citrullus lanatus
Cla022947
I
0.685
SapurV1A.0709s0060
Salix purpurea
SapurV1A.0709s0060
I
0.685
GSMUA_Achr4G12950_001
Musa acuminata
GSMUA_Achr4G12950_001
I
0.685
Cucsa.395890
Cucumis sativus
Cucsa.395890
I
0.685
TCM_007138
Theobroma cacao
TCM_007138
I
0.682
mgf018580m
Mimulus guttatus
mgf018580m
I
0.681
VIT_08s0007g01540
Vitis vinifera
VIT_08s0007g01540
I
0.680
GSMUA_Achr6G33470_001
Musa acuminata
GSMUA_Achr6G33470_001
I
0.680
LPERR06G18380
Leersia perrieri
LPERR06G18380
I
0.680
AtMYB1
Arabidopsis lyrata
scaffold_301043.1
I
0.680
GSMUA_Achr5G28780_001
Musa acuminata
GSMUA_Achr5G28780_001
I
0.680
PK12959.1
Cannabis sativa
PK12959.1
I
0.680
Thhalv10021963m.g
Eutrema salsugineum
Thhalv10021963m.g
I
0.680
MLOC_63964
Hordeum vulgare
MLOC_63964
I
0.679
mgf015566m
Mimulus guttatus
mgf015566m
I
0.679
TRIUR3_25447
Triticum urartu
TRIUR3_25447
I
0.679
evm.TU.supercontig_19.238
Carica papaya
evm.TU.supercontig_19.238
I
0.678
MLOC_10322
Hordeum vulgare
MLOC_10322
I
0.678
TRAES3BF039800050CFD_g
Triticum aestivum
TRAES3BF039800050CFD_g
I
0.678
cassava1242.valid.m1
Manihot esculenta
cassava1242.valid.m1
I
0.678
MDP0000478512
Malus domestica
MDP0000478512
I
0.678
Cla013306
Citrullus lanatus
Cla013306
I
0.677
Gorai.005G234900
Gossypium raimondii
Gorai.005G234900
I
0.676
GSMUA_Achr9G22600_001
Musa acuminata
GSMUA_Achr9G22600_001
I
0.676
Cla014191
Citrullus lanatus
Cla014191
I
0.675
MDP0000203733
Malus domestica
MDP0000203733
I
0.675
Cucsa.102710
Cucumis sativus
Cucsa.102710
I
0.675
PK07741.1
Cannabis sativa
PK07741.1
D
0.675
MDP0000319124
Malus domestica
MDP0000319124
I
0.675
Solyc05g052850.2
Solanum lycopersicum
Solyc05g052850.2
I
0.674
gene21001-v1.0-hybrid
Fragaria vesca
gene21001-v1.0-hybrid
I
0.673
Bo3g062160
Brassica oleracea
Bo3g062160
I
0.672
chr2.LjT13M01.180.nd
Lotus japonicus
chr2.LjT13M01.180.nd
I
0.672
Gorai.011G278500
Gossypium raimondii
Gorai.011G278500
I
0.671
Aquca_007_00776
Aquilegia coerulea
Aquca_007_00776
I
0.671
Cagra.2515s0014
Capsella grandiflora
Cagra.2515s0014
I
0.671
LPERR05G10150
Leersia perrieri
LPERR05G10150
I
0.671
Carubv10013882m.g
Capsella rubella
Carubv10013882m.g
I
0.671
TCM_042629
Theobroma cacao
TCM_042629
I
0.671
GSMUA_Achr4G09450_001
Musa acuminata
GSMUA_Achr4G09450_001
I
0.670
Lus10028250.g
Linum usitatissimum
Lus10028250.g
I
0.670
Lus10040239.g
Linum usitatissimum
Lus10040239.g
I
0.670
GLYMA14G06870
Glycine max
GLYMA14G06870
I
0.670
GSMUA_AchrUn_randomG01280_001
Musa acuminata
GSMUA_AchrUn_randomG01280_001
I
0.670
SELMODRAFT_77255
Selaginella moellendorffii
SELMODRAFT_77255
I
0.669
orange1.1g012494m.g
Citrus sinensis
orange1.1g012494m.g
I
0.669
SELMODRAFT_113522
Selaginella moellendorffii
SELMODRAFT_113522
I
0.669
Ciclev10031463m.g
Citrus clementina
Ciclev10031463m.g
I
0.669
orange1.1g017566m.g
Citrus sinensis
orange1.1g017566m.g
I
0.668
Bostr.6864s0236
Boechera stricta
Bostr.6864s0236
I
0.668
Ciclev10012003m.g
Citrus clementina
Ciclev10012003m.g
I
0.668
GLYMA05G21220
Glycine max
GLYMA05G21220
I
0.667
Cucsa.244650
Cucumis sativus
Cucsa.244650
I
0.666
SapurV1A.0262s0270
Salix purpurea
SapurV1A.0262s0270
I
0.666
Thhalv10010581m.g
Eutrema salsugineum
Thhalv10010581m.g
I
0.665
Pm018862
Prunus mume
Pm018862
I
0.665
MYB77
Arabidopsis lyrata
fgenesh2_kg.5__1356__AT3G50060.1
I
0.665
Cagra.1549s0005
Capsella grandiflora
Cagra.1549s0005
I
0.665
Carubv10019440m.g
Capsella rubella
Carubv10019440m.g
I
0.665
Bo8g079430
Brassica oleracea
Bo8g079430
I
0.665
MDP0000284922
Malus domestica
MDP0000284922
I
0.664
Eucgr.J00250
Eucalyptus grandis
Eucgr.J00250
I
0.664
OPUNC06G19910
Oryza punctata
OPUNC06G19910
I
0.663
ONIVA06G26080
Oryza nivara
ONIVA06G26080
I
0.663
OGLUM06G23260
Oryza glumaepatula
OGLUM06G23260
I
0.663
ORGLA06G0184100
Oryza glaberrima
ORGLA06G0184100
I
0.663
OMERI06G22090
Oryza meridionalis
OMERI06G22090
I
0.663
OS06G0637500
Oryza sativa
OS06G0637500
I
0.663
ORUFI06G23790
Oryza rufipogon
ORUFI06G23790
I
0.663
BGIOSGA020819
Oryza indica
BGIOSGA020819
I
0.663
chr5.CM0096.100.nc
Lotus japonicus
chr5.CM0096.100.nc
I
0.662
CM0528.210.nd
Lotus japonicus
CM0528.210.nd
I
0.662
mgf014089m
Mimulus guttatus
mgf014089m
I
0.662
POPTR_0005s18620
Populus trichocarpa
POPTR_0005s18620
I
0.662
MTR_4g094982
Medicago truncatula
MTR_4g094982
I
0.661