Solyc07g040920.2 (Solanum lycopersicum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Solyc07g040920.2 T280186_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
OS01G0708000
M02326_2.00
Oryza sativa
WRMCCTAVNN

NNBTAGGKYW
PBM
Weirauch et al.(2014)
pTH8716
0.778 0.851
PK06103.1
M02348_2.00
Cannabis sativa
TGCCCTAG

CTAGGGCA
PBM
Weirauch et al.(2014)
pTH9649
0.760 0.766
AT1G72740
M07033_2.00
Arabidopsis thaliana
HMNAAACCCTAAWYY

RRWTTAGGGTTTNKD
Dap-seq
OMalley et al.(2016)
AT1G72740_col_a
0.716 0.809
AT1G72740
M07034_2.00
Arabidopsis thaliana
HNWAACCCTAAHYHNNNHNNN

NNNDNNNDRDTTAGGGTTWND
Dap-seq
OMalley et al.(2016)
AT1G72740_colamp_a
0.716 0.809
estExt_fgenesh1_pg.C_Chr_13.00010057
M02366_2.00
Ostreococcus tauri
NRMCCTANN

NNTAGGKYN
PBM
Weirauch et al.(2014)
pTH9424
0.692 0.702
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc07g040920.2.1 Myb 5 57

Links

Other Myb/SANT family TFs
Other Solanum lycopersicum TFs

195 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
21800_YPL128C Saccharomyces mikatae 21800_YPL128C I 0.000
22419_YPL128C Saccharomyces paradoxus 22419_YPL128C I 0.000
25381_YPL128C Saccharomyces bayanus 25381_YPL128C I 0.000
AACERI_AaceriACR096W Saccharomycetaceae sp ashbya aceri AACERI_AaceriACR096W I 0.000
AGOS_ACR096W Ashbya gossypii AGOS_ACR096W I 0.000
BN7_5968 Wickerhamomyces ciferrii BN7_5968 I 0.000
CANTEDRAFT_127045 Candida tenuis CANTEDRAFT_127045 I 0.000
CaO19.801 Candida albicans CaO19.801 I 0.000
CaO19.8420 Candida albicans CaO19.8420 I 0.000
CD36_18830 Candida dubliniensis CD36_18830 I 0.000
CLUG_01092 Clavispora lusitaniae CLUG_01092 I 0.000
CLUG_01092 Candida lusitaniae CLUG_01092 I 0.000
CORT_0A10400 Candida orthopsilosis CORT_0A10400 I 0.000
CPAG_00784 Candida parapsilosis CPAG_00784 I 0.000
CTRG_01572 Candida tropicalis CTRG_01572 I 0.000
DEHA2C16346g Debaryomyces hansenii DEHA2C16346g I 0.000
Ecym_8316 Eremothecium cymbalariae Ecym_8316 I 0.000
e_gwh1.5.1.153.1 Pichia stipitis e_gwh1.5.1.153.1 I 0.000
G210_0538 Candida maltosa G210_0538 I 0.000
GNLVRS01_PISO0L21659g Millerozyma farinosa GNLVRS01_PISO0L21659g I 0.000
KLTH0D10164g Lachancea thermotolerans KLTH0D10164g I 0.000
KLTH0D10164g Kluyveromyces thermotolerans KLTH0D10164g I 0.000
Kpol_530p11 Vanderwaltozyma polyspora Kpol_530p11 I 0.000
Kwal_8619 Kluyveromyces waltii Kwal_8619 I 0.000
LALA0_S10e01860g Lachancea lanzarotensis LALA0_S10e01860g I 0.000
LELG_01028 Lodderomyces elongisporus LELG_01028 I 0.000
orf19.801 Candida albicans orf19.801 D 0.000
PAS_chr1-4_0281 Komagataella pastoris PAS_chr1-4_0281 I 0.000
PGUG_03851 Meyerozyma guilliermondii PGUG_03851 I 0.000
PGUG_03851 Candida guilliermondii PGUG_03851 I 0.000
PICST_47348 Scheffersomyces stipitis PICST_47348 I 0.000
SAKL0H07678g Lachancea kluyveri SAKL0H07678g I 0.000
SKUD_201904 Saccharomyces kudriavzevii SKUD_201904 I 0.000
SPAPADRAFT_55275 Spathaspora passalidarum SPAPADRAFT_55275 I 0.000
SU7_3534 Saccharomyces arboricola SU7_3534 I 0.000
TBF1 Saccharomyces cerevisiae YPL128C D 0.000
TBLA_0B04080 Tetrapisispora blattae TBLA_0B04080 I 0.000
XP_002490398.1 Pichia pastoris XP_002490398.1 I 0.000
ZBAI_00516 Zygosaccharomyces bailii ZBAI_00516 I 0.000
ZBAI_05815 Zygosaccharomyces bailii ZBAI_05815 I 0.000
ZYRO0F06292g Zygosaccharomyces rouxii ZYRO0F06292g I 0.000