Solyc07g054980.1 (Solanum lycopersicum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Solyc07g054980.1 T280195_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK28187.1
M01286_2.00 		Cannabis sativa
TACCTACC
GGTAGGTA		 PBM
Lambert et al.(2019)
pTH11305 		0.661 0.667
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc07g054980.1.1 Myb 14 61
Solyc07g054980.1.1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Solanum lycopersicum TFs

184 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PGSC0003DMG400015087 Solanum tuberosum PGSC0003DMG400015087 N 0.866
Solyc07g053230.2 Solanum lycopersicum Solyc07g053230.2 I 0.813
PGSC0003DMG401026177 Solanum tuberosum PGSC0003DMG401026177 I 0.809
Solyc07g053240.2 Solanum lycopersicum Solyc07g053240.2 I 0.799
PGSC0003DMG402026177 Solanum tuberosum PGSC0003DMG402026177 I 0.798
PGSC0003DMG400026176 Solanum tuberosum PGSC0003DMG400026176 N 0.787
TCM_007865 Theobroma cacao TCM_007865 I 0.777
PRUPE_ppa026553mg Prunus persica PRUPE_ppa026553mg N 0.772
VIT_12s0134g00480 Vitis vinifera VIT_12s0134g00480 I 0.772
Pm015302 Prunus mume Pm015302 N 0.772
Gorai.012G132400 Gossypium raimondii Gorai.012G132400 I 0.766
MDP0000155426 Malus domestica MDP0000155426 I 0.763
Ciclev10016303m.g Citrus clementina Ciclev10016303m.g I 0.757
Solyc12g005640.1 Solanum lycopersicum Solyc12g005640.1 N 0.757
orange1.1g024860m.g Citrus sinensis orange1.1g024860m.g I 0.757
PGSC0003DMG400013752 Solanum tuberosum PGSC0003DMG400013752 N 0.757
Solyc07g055000.1 Solanum lycopersicum Solyc07g055000.1 N 0.749
MDP0000407613 Malus domestica MDP0000407613 N 0.746
Gorai.005G206800 Gossypium raimondii Gorai.005G206800 N 0.743
Gorai.002G016800 Gossypium raimondii Gorai.002G016800 I 0.741
POPTR_0013s14560 Populus trichocarpa POPTR_0013s14560 I 0.736
SapurV1A.0048s0160 Salix purpurea SapurV1A.0048s0160 N 0.736
Lus10039734.g Linum usitatissimum Lus10039734.g I 0.731
MTR_2g089420 Medicago truncatula MTR_2g089420 N 0.731
GLYMA06G45547 Glycine max GLYMA06G45547 N 0.730
Lus10039735.g Linum usitatissimum Lus10039735.g I 0.730
GLYMA06G45554 Glycine max GLYMA06G45554 I 0.727
Gorai.008G151100 Gossypium raimondii Gorai.008G151100 I 0.727
PK24260.1 Cannabis sativa PK24260.1 N 0.726
cassava6764.valid.m1 Manihot esculenta cassava6764.valid.m1 I 0.725
Lus10033738.g Linum usitatissimum Lus10033738.g N 0.725
Ca_22597 Cicer arietinum Ca_22597 N 0.723
Ciclev10017679m.g Citrus clementina Ciclev10017679m.g I 0.723
GLYMA12G32541 Glycine max GLYMA12G32541 N 0.720
Eucgr.A01767 Eucalyptus grandis Eucgr.A01767 I 0.719
orange1.1g037956m.g Citrus sinensis orange1.1g037956m.g N 0.716
Lus10031607.g Linum usitatissimum Lus10031607.g N 0.716
MTR_0008s0390 Medicago truncatula MTR_0008s0390 N 0.714
MTR_0251s0050 Medicago truncatula MTR_0251s0050 N 0.712
cassava26894.m1 Manihot esculenta cassava26894.m1 N 0.710
GLYMA13G37903 Glycine max GLYMA13G37903 I 0.710
orange1.1g042846m.g Citrus sinensis orange1.1g042846m.g I 0.710
Eucgr.A01766 Eucalyptus grandis Eucgr.A01766 I 0.707
evm.TU.supercontig_34.62 Carica papaya evm.TU.supercontig_34.62 N 0.706
MTR_2g089450 Medicago truncatula MTR_2g089450 N 0.704
Ciclev10017677m.g Citrus clementina Ciclev10017677m.g I 0.701
cassava14699.m1 Manihot esculenta cassava14699.m1 I 0.701
Eucgr.H03057 Eucalyptus grandis Eucgr.H03057 I 0.700
POPTR_0019s14140 Populus trichocarpa POPTR_0019s14140 N 0.700
PK20358.1 Cannabis sativa PK20358.1 I 0.698
gene01998-v1.0-hybrid Fragaria vesca gene01998-v1.0-hybrid N 0.697
chr3.LjT47O18.40.nc Lotus japonicus chr3.LjT47O18.40.nc N 0.695
GSMUA_AchrUn_randomG07900_001 Musa acuminata GSMUA_AchrUn_randomG07900_001 I 0.695
GSMUA_Achr4G28850_001 Musa acuminata GSMUA_Achr4G28850_001 I 0.693
GLYMA12G11330 Glycine max GLYMA12G11330 I 0.693
MDP0000131822 Malus domestica MDP0000131822 I 0.691
GSMUA_Achr6G31520_001 Musa acuminata GSMUA_Achr6G31520_001 I 0.690
Pm009880 Prunus mume Pm009880 N 0.686
gene01997-v1.0-hybrid Fragaria vesca gene01997-v1.0-hybrid I 0.684
SapurV1A.0417s0150 Salix purpurea SapurV1A.0417s0150 I 0.684
Gorai.013G072900 Gossypium raimondii Gorai.013G072900 I 0.684
Gorai.013G071600 Gossypium raimondii Gorai.013G071600 I 0.684
GLYMA12G11340 Glycine max GLYMA12G11340 N 0.684
PGSC0003DMG400013405 Solanum tuberosum PGSC0003DMG400013405 I 0.683
GLYMA10G32410 Glycine max GLYMA10G32410 I 0.681
POPTR_0019s14120 Populus trichocarpa POPTR_0019s14120 I 0.681
evm.TU.supercontig_44.60 Carica papaya evm.TU.supercontig_44.60 I 0.681
chr3.LjT47O18.60.nc Lotus japonicus chr3.LjT47O18.60.nc N 0.680
POPTR_0019s14130 Populus trichocarpa POPTR_0019s14130 N 0.680
GSMUA_Achr1G23990_001 Musa acuminata GSMUA_Achr1G23990_001 I 0.679
Solyc03g005570.2 Solanum lycopersicum Solyc03g005570.2 I 0.679
VIT_12s0134g00490 Vitis vinifera VIT_12s0134g00490 I 0.678
MTR_0008s0470 Medicago truncatula MTR_0008s0470 N 0.678
Lus10039771.g Linum usitatissimum Lus10039771.g N 0.678
Pavir.Gb00650 Panicum virgatum Pavir.Gb00650 I 0.677
Sb06g022660 Sorghum bicolor Sb06g022660 I 0.677
Ciclev10005629m.g Citrus clementina Ciclev10005629m.g I 0.677
Si010814m.g Setaria italica Si010814m.g I 0.677
POPTR_0008s16660 Populus trichocarpa POPTR_0008s16660 I 0.677
orange1.1g024484m.g Citrus sinensis orange1.1g024484m.g I 0.677
GRMZM2G048295 Zea mays GRMZM2G048295 I 0.677
Lus10018547.g Linum usitatissimum Lus10018547.g N 0.676
SELMODRAFT_38058 Selaginella moellendorffii SELMODRAFT_38058 I 0.676
PRUPE_ppa015081mg Prunus persica PRUPE_ppa015081mg N 0.675
Gorai.011G021300 Gossypium raimondii Gorai.011G021300 N 0.675
SapurV1A.2051s0040 Salix purpurea SapurV1A.2051s0040 I 0.675
SapurV1A.0048s0170 Salix purpurea SapurV1A.0048s0170 I 0.675
SapurV1A.0417s0130 Salix purpurea SapurV1A.0417s0130 I 0.674
GLYMA12G11390 Glycine max GLYMA12G11390 N 0.674
Solyc10g005550.1 Solanum lycopersicum Solyc10g005550.1 I 0.673
Gorai.013G073000 Gossypium raimondii Gorai.013G073000 N 0.673
Eucgr.D00050 Eucalyptus grandis Eucgr.D00050 N 0.672
Bo1g017860 Brassica oleracea Bo1g017860 I 0.672
Bra021033 Brassica rapa Bra021033 I 0.672
TCM_030020 Theobroma cacao TCM_030020 I 0.672
Thhalv10026921m.g Eutrema salsugineum Thhalv10026921m.g I 0.672
Bra040181 Brassica rapa Bra040181 I 0.672
TCM_020889 Theobroma cacao TCM_020889 I 0.670
Bostr.2983s0050 Boechera stricta Bostr.2983s0050 I 0.670
Gorai.010G149300 Gossypium raimondii Gorai.010G149300 I 0.670
cassava35427.valid.m1 Manihot esculenta cassava35427.valid.m1 I 0.669
GLYMA12G32530 Glycine max GLYMA12G32530 I 0.669
evm.TU.supercontig_27.156 Carica papaya evm.TU.supercontig_27.156 N 0.668
Bostr.19424s0318 Boechera stricta Bostr.19424s0318 I 0.668
Cagra.2181s0015 Capsella grandiflora Cagra.2181s0015 I 0.668
Lus10018546.g Linum usitatissimum Lus10018546.g N 0.668
Bra014929 Brassica rapa Bra014929 I 0.668
MYB15 Arabidopsis lyrata fgenesh2_kg.3__2539__AT3G23250.1 I 0.668
Bra001907 Brassica rapa Bra001907 I 0.668
Bo7g040780 Brassica oleracea Bo7g040780 I 0.668
Cla006077 Citrullus lanatus Cla006077 I 0.668
Thhalv10022110m.g Eutrema salsugineum Thhalv10022110m.g I 0.668
Bo3g081700 Brassica oleracea Bo3g081700 I 0.668
Gorai.013G143200 Gossypium raimondii Gorai.013G143200 I 0.667
Pavir.J38204 Panicum virgatum Pavir.J38204 I 0.666
Pavir.Ba00668 Panicum virgatum Pavir.Ba00668 I 0.666
GRMZM2G031323 Zea mays GRMZM2G031323 I 0.666
Sb02g036250 Sorghum bicolor Sb02g036250 I 0.666
Si030273m.g Setaria italica Si030273m.g I 0.666
29933.m001454 Ricinus communis 29933.m001454 N 0.666
GRMZM2G166337 Zea mays GRMZM2G166337 I 0.666
AC206901.3_FG005 Zea mays AC206901.3_FG005 I 0.666
GLYMA01G06192 Glycine max GLYMA01G06192 I 0.665
MDP0000289283 Malus domestica MDP0000289283 I 0.664
Gorai.011G173900 Gossypium raimondii Gorai.011G173900 I 0.664
TCM_007868 Theobroma cacao TCM_007868 I 0.664
GLYMA20G35180 Glycine max GLYMA20G35180 I 0.664
GLYMA06G45540 Glycine max GLYMA06G45540 N 0.664
AMTR_s00032p00057800 Amborella trichopoda AMTR_s00032p00057800 I 0.664
OGLUM04G23630 Oryza glumaepatula OGLUM04G23630 I 0.662
OBART04G23680 Oryza barthii OBART04G23680 I 0.662
ONIVA04G19740 Oryza nivara ONIVA04G19740 I 0.662
OB04G30570 Oryza brachyantha OB04G30570 I 0.662
OPUNC04G21230 Oryza punctata OPUNC04G21230 I 0.662
ORUFI04G25410 Oryza rufipogon ORUFI04G25410 I 0.662
ORGLA04G0202400 Oryza glaberrima ORGLA04G0202400 I 0.662
GSMUA_Achr9G12180_001 Musa acuminata GSMUA_Achr9G12180_001 I 0.662
GSMUA_Achr2G18090_001 Musa acuminata GSMUA_Achr2G18090_001 I 0.662
Pavir.Gb00587 Panicum virgatum Pavir.Gb00587 I 0.662
BGIOSGA014440 Oryza indica BGIOSGA014440 I 0.662
Pavir.Ga00752 Panicum virgatum Pavir.Ga00752 I 0.662
GRMZM2G097636 Zea mays GRMZM2G097636 I 0.662
OS04G0594100 Oryza sativa OS04G0594100 I 0.662
GRMZM2G097638 Zea mays GRMZM2G097638 I 0.662
GSMUA_Achr5G14600_001 Musa acuminata GSMUA_Achr5G14600_001 I 0.662
OMERI04G19570 Oryza meridionalis OMERI04G19570 I 0.662
Sb06g027180 Sorghum bicolor Sb06g027180 I 0.662
Si010384m.g Setaria italica Si010384m.g I 0.662
Bra029553 Brassica rapa Bra029553 I 0.661
Bra003619 Brassica rapa Bra003619 I 0.661
Bo9g076410 Brassica oleracea Bo9g076410 I 0.661
ATMYB63 Arabidopsis lyrata fgenesh2_kg.2__2216__AT1G79180.1 I 0.661
Cagra.1361s0065 Capsella grandiflora Cagra.1361s0065 I 0.661
GLYMA07G30860 Glycine max GLYMA07G30860 I 0.661
Bostr.20129s0353 Boechera stricta Bostr.20129s0353 I 0.661
Bo6g122640 Brassica oleracea Bo6g122640 I 0.661
GLYMA08G06440 Glycine max GLYMA08G06440 I 0.661
Thhalv10029512m.g Eutrema salsugineum Thhalv10029512m.g I 0.661
Eucgr.E03689 Eucalyptus grandis Eucgr.E03689 I 0.661
AtMYB74 Arabidopsis lyrata Al_scaffold_0006_3584 I 0.661
chr6.CM1613.30.nc Lotus japonicus chr6.CM1613.30.nc I 0.661
ATMYB63 Arabidopsis thaliana AT1G79180 D 0.661
Eucgr.E03819 Eucalyptus grandis Eucgr.E03819 I 0.661
mgf018114m Mimulus guttatus mgf018114m I 0.661
PK03488.1 Cannabis sativa PK03488.1 I 0.661
Bo6g081140 Brassica oleracea Bo6g081140 I 0.661
Cucsa.045790 Cucumis sativus Cucsa.045790 I 0.661
TCM_030009 Theobroma cacao TCM_030009 I 0.661
Ciclev10015729m.g Citrus clementina Ciclev10015729m.g I 0.661
VIT_00s0203g00070 Vitis vinifera VIT_00s0203g00070 I 0.661
Solyc02g079280.2 Solanum lycopersicum Solyc02g079280.2 I 0.661
PRUPE_ppa007438mg Prunus persica PRUPE_ppa007438mg I 0.661
POPTR_0004s03310 Populus trichocarpa POPTR_0004s03310 I 0.661
PGSC0003DMG400022399 Solanum tuberosum PGSC0003DMG400022399 I 0.661
Gorai.009G174500 Gossypium raimondii Gorai.009G174500 I 0.661
Cla001360 Citrullus lanatus Cla001360 I 0.661
gene30725-v1.0-hybrid Fragaria vesca gene30725-v1.0-hybrid I 0.661
cassava19500.valid.m1 Manihot esculenta cassava19500.valid.m1 I 0.661
POPTR_0011s04120 Populus trichocarpa POPTR_0011s04120 I 0.661
Pm009892 Prunus mume Pm009892 I 0.661
orange1.1g018154m.g Citrus sinensis orange1.1g018154m.g I 0.661
Cla019747 Citrullus lanatus Cla019747 I 0.661
MDP0000492221 Malus domestica MDP0000492221 I 0.661
Cucsa.126220 Cucumis sativus Cucsa.126220 I 0.661