Solyc08g080580.2 (Solanum lycopersicum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Solyc08g080580.2 T280216_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q948S4_TOBAC
M11073_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBB_01 		0.853 0.885
Q948S5_TOBAC
M11074_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBA2_01 		0.665 0.719
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc08g080580.2.1 Myb 55 100
Solyc08g080580.2.1 Myb 106 152
Solyc08g080580.2.1 Myb 158 203

Links

Other Myb/SANT family TFs
Other Solanum lycopersicum TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PGSC0003DMG400003055 Solanum tuberosum PGSC0003DMG400003055 I 0.872
Q948S4_TOBAC Nicotiana tabacum Q948S4_TOBAC D 0.853
Aquca_013_00366 Aquilegia coerulea Aquca_013_00366 I 0.715
Aquca_001_00435 Aquilegia coerulea Aquca_001_00435 I 0.699
VIT_11s0016g03750 Vitis vinifera VIT_11s0016g03750 I 0.689
TCM_047091 Theobroma cacao TCM_047091 I 0.684
MDP0000179225 Malus domestica MDP0000179225 I 0.679
TCM_016203 Theobroma cacao TCM_016203 I 0.679
Pm005124 Prunus mume Pm005124 I 0.679
Solyc08g068320.2 Solanum lycopersicum Solyc08g068320.2 I 0.677
Gorai.010G110000 Gossypium raimondii Gorai.010G110000 I 0.677
MTR_1g026870 Medicago truncatula MTR_1g026870 I 0.677
VIT_04s0008g03780 Vitis vinifera VIT_04s0008g03780 I 0.673
PRUPE_ppa000676mg Prunus persica PRUPE_ppa000676mg I 0.673
MTR_3g110028 Medicago truncatula MTR_3g110028 I 0.672
GLYMA14G21523 Glycine max GLYMA14G21523 I 0.671
GLYMA17G26240 Glycine max GLYMA17G26240 I 0.671
POPTR_0018s00710 Populus trichocarpa POPTR_0018s00710 I 0.668
evm.TU.supercontig_78.76 Carica papaya evm.TU.supercontig_78.76 I 0.668
SapurV1A.0446s0220 Salix purpurea SapurV1A.0446s0220 I 0.668
POPTR_0006s25840 Populus trichocarpa POPTR_0006s25840 I 0.668
Ciclev10007316m.g Citrus clementina Ciclev10007316m.g I 0.668
Eucgr.C02893 Eucalyptus grandis Eucgr.C02893 I 0.666
SapurV1A.0283s0180 Salix purpurea SapurV1A.0283s0180 I 0.666
TCM_005402 Theobroma cacao TCM_005402 I 0.666
Cla022565 Citrullus lanatus Cla022565 I 0.666
Cucsa.161430 Cucumis sativus Cucsa.161430 I 0.666
Q948S5_TOBAC Nicotiana tabacum Q948S5_TOBAC D 0.665
Ca_14925 Cicer arietinum Ca_14925 I 0.665
Bo1g010040 Brassica oleracea Bo1g010040 I 0.664
Bra011376 Brassica rapa Bra011376 I 0.664
Gorai.009G051000 Gossypium raimondii Gorai.009G051000 I 0.664
Bo7g115810 Brassica oleracea Bo7g115810 I 0.662
Thhalv10024320m.g Eutrema salsugineum Thhalv10024320m.g I 0.661