Solyc09g005370.1 (Solanum lycopersicum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Solyc09g005370.1 T280220_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PHL7
M02292_2.00 		Arabidopsis thaliana
NWGATDCBNN
NNVGHATCWN		 PBM
Weirauch et al.(2014)
pTH7253 		0.669 0.756
PK10342.1
M02351_2.00 		Cannabis sativa
WAGATKCS
SGMATCTW		 PBM
Weirauch et al.(2014)
pTH9489 		0.669 0.756
PHL7
M07040_2.00 		Arabidopsis thaliana
DRNAKATTCBNHNNN
NNNDNVGAATMTNYH		 Dap-seq
OMalley et al.(2016)
At2g01060_colamp_a 		0.669 0.756
PHL7
M07041_2.00 		Arabidopsis thaliana
VGAATATTCBNHH
DDNVGAATATTCB		 Dap-seq
OMalley et al.(2016)
At2g01060_col 		0.669 0.756
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc09g005370.1.1 Myb 25 74

Links

Other Myb/SANT family TFs
Other Solanum lycopersicum TFs

114 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10005036.g Linum usitatissimum Lus10005036.g I 0.717
Lus10027806.g Linum usitatissimum Lus10027806.g I 0.717
Gorai.006G182800 Gossypium raimondii Gorai.006G182800 I 0.717
TCM_021688 Theobroma cacao TCM_021688 I 0.717
Lus10004809.g Linum usitatissimum Lus10004809.g I 0.717
evm.TU.contig_34762 Carica papaya evm.TU.contig_34762 I 0.709
POPTR_0016s12430 Populus trichocarpa POPTR_0016s12430 I 0.709
POPTR_0006s10190 Populus trichocarpa POPTR_0006s10190 I 0.709
Lus10002483.g Linum usitatissimum Lus10002483.g I 0.706
Ciclev10013453m.g Citrus clementina Ciclev10013453m.g I 0.699
orange1.1g025728m.g Citrus sinensis orange1.1g025728m.g I 0.699
cassava3831.m1 Manihot esculenta cassava3831.m1 I 0.698
mgf018409m Mimulus guttatus mgf018409m N 0.691
estExt_fgenesh1_pg.C_740109 Physcomitrella patens estExt_fgenesh1_pg.C_740109 I 0.689
estExt_fgenesh1_pg.C_2690029 Physcomitrella patens estExt_fgenesh1_pg.C_2690029 I 0.687
estExt_fgenesh1_pg.C_2260017 Physcomitrella patens estExt_fgenesh1_pg.C_2260017 I 0.687
Eucgr.D00972 Eucalyptus grandis Eucgr.D00972 I 0.687
Gorai.010G247100 Gossypium raimondii Gorai.010G247100 I 0.687
29701.m000580 Ricinus communis 29701.m000580 I 0.678
BRADI3G22290 Brachypodium distachyon BRADI3G22290 I 0.677
Cla014593 Citrullus lanatus Cla014593 I 0.669
Pm009657 Prunus mume Pm009657 I 0.669
AMTR_s00061p00095620 Amborella trichopoda AMTR_s00061p00095620 I 0.669
mgf002744m Mimulus guttatus mgf002744m I 0.669
mgf003647m Mimulus guttatus mgf003647m I 0.669
mgf006394m Mimulus guttatus mgf006394m I 0.669
Cucsa.044390 Cucumis sativus Cucsa.044390 I 0.669
cassava13407.valid.m1 Manihot esculenta cassava13407.valid.m1 I 0.669
cassava13406.valid.m1 Manihot esculenta cassava13406.valid.m1 I 0.669
29805.m001544 Ricinus communis 29805.m001544 I 0.669
cassava36260.valid.m1 Manihot esculenta cassava36260.valid.m1 I 0.669
cassava36261.valid.m1 Manihot esculenta cassava36261.valid.m1 I 0.669
Cagra.2315s0003 Capsella grandiflora Cagra.2315s0003 I 0.669
orange1.1g020124m.g Citrus sinensis orange1.1g020124m.g I 0.669
MDP0000826899 Malus domestica MDP0000826899 I 0.669
MDP0000323119 Malus domestica MDP0000323119 I 0.669
SapurV1A.0089s0170 Salix purpurea SapurV1A.0089s0170 I 0.669
SapurV1A.0220s0460 Salix purpurea SapurV1A.0220s0460 I 0.669
LjSGA_049176.1 Lotus japonicus LjSGA_049176.1 I 0.669
PK10342.1 Cannabis sativa PK10342.1 D 0.669
Thhalv10000981m.g Eutrema salsugineum Thhalv10000981m.g I 0.669
gene19867-v1.0-hybrid Fragaria vesca gene19867-v1.0-hybrid I 0.669
evm.TU.supercontig_27.185 Carica papaya evm.TU.supercontig_27.185 I 0.669
mgf015945m Mimulus guttatus mgf015945m I 0.669
mgf014369m Mimulus guttatus mgf014369m I 0.669
mgf012689m Mimulus guttatus mgf012689m I 0.669
Bostr.7903s0063 Boechera stricta Bostr.7903s0063 I 0.669
VIT_00s0475g00040 Vitis vinifera VIT_00s0475g00040 I 0.669
Eucgr.E04232 Eucalyptus grandis Eucgr.E04232 I 0.669
Ciclev10015893m.g Citrus clementina Ciclev10015893m.g I 0.669
Carubv10017769m.g Capsella rubella Carubv10017769m.g I 0.669
mgf007291m Mimulus guttatus mgf007291m I 0.669
Ca_07939 Cicer arietinum Ca_07939 I 0.669
OGLUM06G21780 Oryza glumaepatula OGLUM06G21780 I 0.669
OGLUM08G12610 Oryza glumaepatula OGLUM08G12610 I 0.669
OBART08G11790 Oryza barthii OBART08G11790 I 0.669
OBART06G20690 Oryza barthii OBART06G20690 I 0.669
OB08G20230 Oryza brachyantha OB08G20230 I 0.669
OLONG_021348 Oryza longistaminata OLONG_021348 I 0.669
OLONG_023378 Oryza longistaminata OLONG_023378 I 0.669
OPUNC06G18860 Oryza punctata OPUNC06G18860 I 0.669
ONIVA09G02590 Oryza nivara ONIVA09G02590 I 0.669
ONIVA06G24430 Oryza nivara ONIVA06G24430 I 0.669
TCM_030480 Theobroma cacao TCM_030480 I 0.669
OB06G28540 Oryza brachyantha OB06G28540 I 0.669
MTR_2g027860 Medicago truncatula MTR_2g027860 I 0.669
Bo7g077990 Brassica oleracea Bo7g077990 I 0.669
Bra024909 Brassica rapa Bra024909 I 0.669
BGIOSGA028511 Oryza indica BGIOSGA028511 I 0.669
BGIOSGA023251 Oryza indica BGIOSGA023251 I 0.669
PHL7 Arabidopsis thaliana AT2G01060 D 0.669
fgenesh2_kg.5__3__AT2G01060.1 Arabidopsis lyrata fgenesh2_kg.5__3__AT2G01060.1 I 0.669
GLYMA09G02040 Glycine max GLYMA09G02040 I 0.669
LPERR08G09750 Leersia perrieri LPERR08G09750 I 0.669
LPERR06G17280 Leersia perrieri LPERR06G17280 I 0.669
GSMUA_Achr3G11970_001 Musa acuminata GSMUA_Achr3G11970_001 I 0.669
GLYMA15G12940 Glycine max GLYMA15G12940 I 0.669
OPUNC08G10740 Oryza punctata OPUNC08G10740 I 0.669
OMERI06G21260 Oryza meridionalis OMERI06G21260 I 0.669
ORGLA06G0171400 Oryza glaberrima ORGLA06G0171400 I 0.669
POPTR_0016s00310 Populus trichocarpa POPTR_0016s00310 I 0.669
POPTR_0006s00290 Populus trichocarpa POPTR_0006s00290 I 0.669
SELMODRAFT_47417 Selaginella moellendorffii SELMODRAFT_47417 I 0.669
SELMODRAFT_57477 Selaginella moellendorffii SELMODRAFT_57477 I 0.669
Solyc11g067280.1 Solanum lycopersicum Solyc11g067280.1 I 0.669
Solyc11g022470.1 Solanum lycopersicum Solyc11g022470.1 I 0.669
Si014152m.g Setaria italica Si014152m.g I 0.669
PGSC0003DMG400008786 Solanum tuberosum PGSC0003DMG400008786 I 0.669
PRUPE_ppa009121mg Prunus persica PRUPE_ppa009121mg I 0.669
OS06G0609500 Oryza sativa OS06G0609500 I 0.669
ORGLA08G0104600 Oryza glaberrima ORGLA08G0104600 I 0.669
ORUFI08G13040 Oryza rufipogon ORUFI08G13040 I 0.669
PGSC0003DMG400007401 Solanum tuberosum PGSC0003DMG400007401 I 0.669
ORUFI06G22120 Oryza rufipogon ORUFI06G22120 I 0.669
OS08G0346500 Oryza sativa OS08G0346500 I 0.669
Gorai.004G023100 Gossypium raimondii Gorai.004G023100 I 0.666
Cla017754 Citrullus lanatus Cla017754 I 0.665
GLYMA03G00590 Glycine max GLYMA03G00590 I 0.665
AMTR_s00095p00071020 Amborella trichopoda AMTR_s00095p00071020 I 0.665
chr1.CM0098.390.nd Lotus japonicus chr1.CM0098.390.nd I 0.665
Ca_08144 Cicer arietinum Ca_08144 I 0.665
VIT_08s0040g00100 Vitis vinifera VIT_08s0040g00100 I 0.665
MDP0000323121 Malus domestica MDP0000323121 I 0.665
Pm025479 Prunus mume Pm025479 I 0.665
gene27918-v1.0-hybrid Fragaria vesca gene27918-v1.0-hybrid I 0.665
MTR_7g088070 Medicago truncatula MTR_7g088070 I 0.665
evm.TU.supercontig_33.181 Carica papaya evm.TU.supercontig_33.181 I 0.665
Aquca_009_00105 Aquilegia coerulea Aquca_009_00105 I 0.665
PRUPE_ppa009512mg Prunus persica PRUPE_ppa009512mg I 0.665
MDP0000232923 Malus domestica MDP0000232923 I 0.665
GLYMA19G30220 Glycine max GLYMA19G30220 I 0.665
Cucsa.337130 Cucumis sativus Cucsa.337130 I 0.665
POPTR_0008s08720 Populus trichocarpa POPTR_0008s08720 I 0.662
VIT_08s0105g00370 Vitis vinifera VIT_08s0105g00370 I 0.662