CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc10g080460.1
(
Solanum lycopersicum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Solyc10g080460.1
T280256_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc10g080460.1.1
Myb
220
271
RIRWNEDLHDRFLECVNRLGGADKATPKQILNLMDSDCLTLDHVKSHLQKYR
Links
Other
Myb/SANT
family TFs
Other
Solanum lycopersicum
TFs
64 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGSC0003DMG400023674
Solanum tuberosum
PGSC0003DMG400023674
N
0.909
PGSC0003DMG400011435
Solanum tuberosum
PGSC0003DMG400011435
N
0.762
Solyc10g078720.1
Solanum lycopersicum
Solyc10g078720.1
N
0.762
VIT_08s0007g06310
Vitis vinifera
VIT_08s0007g06310
I
0.744
OMERI02G06020
Oryza meridionalis
OMERI02G06020
I
0.731
Bra005912
Brassica rapa
Bra005912
N
0.719
Bo3g004040
Brassica oleracea
Bo3g004040
N
0.719
Gorai.002G225400
Gossypium raimondii
Gorai.002G225400
N
0.713
TCM_024886
Theobroma cacao
TCM_024886
N
0.713
mgf007985m
Mimulus guttatus
mgf007985m
N
0.707
mgf007532m
Mimulus guttatus
mgf007532m
N
0.707
GSMUA_Achr7G06370_001
Musa acuminata
GSMUA_Achr7G06370_001
I
0.704
POPTR_0006s20540
Populus trichocarpa
POPTR_0006s20540
N
0.703
28582.m000316
Ricinus communis
28582.m000316
N
0.695
Cla011853
Citrullus lanatus
Cla011853
N
0.695
Cucsa.353890
Cucumis sativus
Cucsa.353890
N
0.695
cassava12254.valid.m1
Manihot esculenta
cassava12254.valid.m1
N
0.695
cassava39743.m1
Manihot esculenta
cassava39743.m1
N
0.695
POPTR_0016s04830
Populus trichocarpa
POPTR_0016s04830
N
0.695
cassava12255.valid.m1
Manihot esculenta
cassava12255.valid.m1
N
0.695
Ciclev10012014m.g
Citrus clementina
Ciclev10012014m.g
N
0.695
Bra028717
Brassica rapa
Bra028717
N
0.695
SapurV1A.0018s0530
Salix purpurea
SapurV1A.0018s0530
N
0.695
Bo2g007410
Brassica oleracea
Bo2g007410
N
0.695
SapurV1A.0251s0040
Salix purpurea
SapurV1A.0251s0040
N
0.695
Thhalv10013850m.g
Eutrema salsugineum
Thhalv10013850m.g
N
0.695
fgenesh2_kg.6__627__AT5G06800.1
Arabidopsis lyrata
fgenesh2_kg.6__627__AT5G06800.1
N
0.695
GLYMA09G17404
Glycine max
GLYMA09G17404
N
0.695
Lus10021035.g
Linum usitatissimum
Lus10021035.g
N
0.695
Bostr.13129s0292
Boechera stricta
Bostr.13129s0292
N
0.695
orange1.1g018583m.g
Citrus sinensis
orange1.1g018583m.g
N
0.695
MTR_1g053835
Medicago truncatula
MTR_1g053835
N
0.695
Lus10023816.g
Linum usitatissimum
Lus10023816.g
N
0.694
Traes_2AL_8D3A3687D
Triticum aestivum
Traes_2AL_8D3A3687D
I
0.691
Traes_2BL_FA727026F
Triticum aestivum
Traes_2BL_FA727026F
I
0.691
F775_12865
Aegilops tauschii
F775_12865
I
0.691
Aquca_009_00165
Aquilegia coerulea
Aquca_009_00165
N
0.684
orange1.1g035950m.g
Citrus sinensis
orange1.1g035950m.g
N
0.684
Aquca_012_00204
Aquilegia coerulea
Aquca_012_00204
N
0.684
Ciclev10033388m.g
Citrus clementina
Ciclev10033388m.g
N
0.684
GSMUA_Achr4G19300_001
Musa acuminata
GSMUA_Achr4G19300_001
I
0.683
SapurV1A.0008s0360
Salix purpurea
SapurV1A.0008s0360
N
0.683
SapurV1A.4156s0010
Salix purpurea
SapurV1A.4156s0010
N
0.683
POPTR_0001s23560
Populus trichocarpa
POPTR_0001s23560
N
0.683
Gorai.006G142000
Gossypium raimondii
Gorai.006G142000
N
0.679
evm.TU.supercontig_85.82
Carica papaya
evm.TU.supercontig_85.82
N
0.679
AT5G06800
Arabidopsis thaliana
AT5G06800
N
0.677
MTR_7g093030
Medicago truncatula
MTR_7g093030
N
0.677
Pavir.Ga00732
Panicum virgatum
Pavir.Ga00732
I
0.673
BGIOSGA017051
Oryza indica
BGIOSGA017051
I
0.673
MLOC_8187
Hordeum vulgare
MLOC_8187
I
0.673
OBART04G24010
Oryza barthii
OBART04G24010
I
0.673
OS04G0600000
Oryza sativa
OS04G0600000
I
0.673
Sb06g027405
Sorghum bicolor
Sb06g027405
I
0.673
30226.m001993
Ricinus communis
30226.m001993
N
0.673
ORUFI04G25750
Oryza rufipogon
ORUFI04G25750
I
0.673
ORGLA04G0205700
Oryza glaberrima
ORGLA04G0205700
I
0.673
VIT_08s0007g06180
Vitis vinifera
VIT_08s0007g06180
I
0.673
ONIVA04G23170
Oryza nivara
ONIVA04G23170
I
0.673
OGLUM04G23960
Oryza glumaepatula
OGLUM04G23960
I
0.673
AMTR_s00106p00040830
Amborella trichopoda
AMTR_s00106p00040830
I
0.667
GSMUA_AchrUn_randomG02870_001
Musa acuminata
GSMUA_AchrUn_randomG02870_001
I
0.665
Cucsa.177640
Cucumis sativus
Cucsa.177640
I
0.664
Eucgr.D02611
Eucalyptus grandis
Eucgr.D02611
I
0.663