Solyc10g084370.1 (Solanum lycopersicum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Solyc10g084370.1 T280262_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RVE8
M01074_2.00 		Arabidopsis thaliana
NNNRWATCNN
NNGATWYNNN		 PBM
Sullivan et al.(2014)
pTH7136 		0.909 1.000
RVE8
M07069_2.00 		Arabidopsis thaliana
NHNWAAATATCT
AGATATTTWNDN		 Dap-seq
OMalley et al.(2016)
At3g09600_col_a 		0.909 1.000
RVE8
M07070_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At3g09600_colamp_a 		0.909 1.000
RVE4
M07117_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LCL1_colamp_a 		0.909 0.978
RVE4
M07118_2.00 		Arabidopsis thaliana
NAAAATATCT
AGATATTTTN		 Dap-seq
OMalley et al.(2016)
LCL1_col 		0.909 0.978
PK02532.1
M02347_2.00 		Cannabis sativa
WAATATCTN
NAGATATTW		 PBM
Weirauch et al.(2014)
pTH9579 		0.901 0.957
RVE6
M01081_2.00 		Arabidopsis thaliana
AATATCTD
HAGATATT		 PBM
Sullivan et al.(2014)
pTH7151 		0.891 0.935
RVE6
M07138_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At5g52660_col_a 		0.891 0.935
RVE6
M07139_2.00 		Arabidopsis thaliana
NNNWAAATATCT
AGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
At5g52660_colamp_a 		0.891 0.935
mybG
M02319_2.00 		Dictyostelium discoideum
WAATATCT
AGATATTW		 PBM
Weirauch et al.(2014)
pTH5362 		0.818 0.891
RVE5
M01079_2.00 		Arabidopsis thaliana
NWAATATCHN
NDGATATTWN		 PBM
Sullivan et al.(2014)
pTH7138 		0.795 0.870
RVE5
M07100_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At4g01280_col_a 		0.795 0.870
RVE5
M07101_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At4g01280_colamp_a 		0.795 0.870
PK08316.1
M02350_2.00 		Cannabis sativa
NNNRWATCNN
NNGATWYNNN		 PBM
Weirauch et al.(2014)
pTH9488 		0.706 0.717
RVE1
M00879_2.00 		Arabidopsis thaliana
AAATATCT
AGATATTT		 PBM
Franco-Zorrilla et al.(2014)
RVE1 		0.670 0.674
RVE1
M07128_2.00 		Arabidopsis thaliana
NNNWAAATATCTNN
NNAGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
RVE1_col_a 		0.670 0.674
RVE1
M07129_2.00 		Arabidopsis thaliana
NNWAATATCW
WGATATTWNN		 Dap-seq
OMalley et al.(2016)
RVE1_colamp_a 		0.670 0.674
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc10g084370.1.1 Myb 35 80

Links

Other Myb/SANT family TFs
Other Solanum lycopersicum TFs

334 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_013_00679 Aquilegia coerulea Aquca_013_00679 I 0.000
Aquca_030_00214 Aquilegia coerulea Aquca_030_00214 I 0.000
BGIOSGA026461 Oryza indica BGIOSGA026461 I 0.000
BGIOSGA026464 Oryza indica BGIOSGA026464 I 0.000
Bo2g083920 Brassica oleracea Bo2g083920 I 0.000
Bo6g086320 Brassica oleracea Bo6g086320 I 0.000
Bo6g119660 Brassica oleracea Bo6g119660 I 0.000
Bo9g155940 Brassica oleracea Bo9g155940 I 0.000
Bostr.23794s0027 Boechera stricta Bostr.23794s0027 I 0.000
Bostr.26527s0367 Boechera stricta Bostr.26527s0367 I 0.000
Bostr.3288s0201 Boechera stricta Bostr.3288s0201 I 0.000
Bra002159 Brassica rapa Bra002159 I 0.000
Bra003752 Brassica rapa Bra003752 I 0.000
Bra008200 Brassica rapa Bra008200 I 0.000
Bra015840 Brassica rapa Bra015840 I 0.000
BRADI3G12680 Brachypodium distachyon BRADI3G12680 I 0.000
Cagra.0712s0008 Capsella grandiflora Cagra.0712s0008 I 0.000
Cagra.0799s0022 Capsella grandiflora Cagra.0799s0022 I 0.000
Carubv10002425m.g Capsella rubella Carubv10002425m.g I 0.000
Carubv10020960m.g Capsella rubella Carubv10020960m.g I 0.000
chr1.CM0195.510.nd Lotus japonicus chr1.CM0195.510.nd I 0.000
Ciclev10022244m.g Citrus clementina Ciclev10022244m.g I 0.000
Cla001755 Citrullus lanatus Cla001755 I 0.000
Cla022803 Citrullus lanatus Cla022803 I 0.000
Cucsa.119440 Cucumis sativus Cucsa.119440 I 0.000
Cucsa.231820 Cucumis sativus Cucsa.231820 I 0.000
DREB2C Oryza sativa OS08G0565200 I 0.000
DREB2D Arabidopsis thaliana AT1G75490 D 0.000
DREB2G Arabidopsis thaliana AT5G18450 D 0.000
Eucgr.F01607 Eucalyptus grandis Eucgr.F01607 I 0.000
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.000
evm.TU.supercontig_51.23 Carica papaya evm.TU.supercontig_51.23 I 0.000
F775_01779 Aegilops tauschii F775_01779 I 0.000
F775_02345 Aegilops tauschii F775_02345 I 0.000
F775_32062 Aegilops tauschii F775_32062 I 0.000
fgenesh2_kg.2__1828__AT1G75490.1 Arabidopsis lyrata fgenesh2_kg.2__1828__AT1G75490.1 I 0.000
gene08479-v1.0-hybrid Fragaria vesca gene08479-v1.0-hybrid I 0.000
gene16710-v1.0-hybrid Fragaria vesca gene16710-v1.0-hybrid I 0.000
gene21047-v1.0-hybrid Fragaria vesca gene21047-v1.0-hybrid I 0.000
Gorai.007G271900 Gossypium raimondii Gorai.007G271900 I 0.000
Gorai.009G271400 Gossypium raimondii Gorai.009G271400 I 0.000
GRMZM2G006745 Zea mays GRMZM2G006745 I 0.000
GRMZM2G028386 Zea mays GRMZM2G028386 I 0.000
GRMZM2G156737 Zea mays GRMZM2G156737 I 0.000
GSMUA_Achr3G00320_001 Musa acuminata GSMUA_Achr3G00320_001 I 0.000
GSMUA_AchrUn_randomG08690_001 Musa acuminata GSMUA_AchrUn_randomG08690_001 I 0.000
LPERR08G12790 Leersia perrieri LPERR08G12790 I 0.000
LPERR08G20650 Leersia perrieri LPERR08G20650 I 0.000
Lus10003581.g Linum usitatissimum Lus10003581.g I 0.000
Lus10006127.g Linum usitatissimum Lus10006127.g I 0.000
Lus10010632.g Linum usitatissimum Lus10010632.g I 0.000
Lus10024298.g Linum usitatissimum Lus10024298.g I 0.000
MDP0000147009 Malus domestica MDP0000147009 I 0.000
MDP0000165880 Malus domestica MDP0000165880 I 0.000
MDP0000250924 Malus domestica MDP0000250924 I 0.000
MDP0000446783 Malus domestica MDP0000446783 I 0.000
mgf017629m Mimulus guttatus mgf017629m I 0.000
MLOC_12223 Hordeum vulgare MLOC_12223 I 0.000
MLOC_66580 Hordeum vulgare MLOC_66580 I 0.000
MTR_3g112440 Medicago truncatula MTR_3g112440 I 0.000
OB08G30790 Oryza brachyantha OB08G30790 I 0.000
OGLUM08G25470 Oryza glumaepatula OGLUM08G25470 I 0.000
OMERI08G18820 Oryza meridionalis OMERI08G18820 I 0.000
ONIVA09G01190 Oryza nivara ONIVA09G01190 I 0.000
OPUNC08G21890 Oryza punctata OPUNC08G21890 I 0.000
ORGLA08G0193700 Oryza glaberrima ORGLA08G0193700 I 0.000
Pavir.Ca01725 Panicum virgatum Pavir.Ca01725 I 0.000
Pavir.Cb01298 Panicum virgatum Pavir.Cb01298 I 0.000
Pavir.J22169 Panicum virgatum Pavir.J22169 I 0.000
Pavir.J25464 Panicum virgatum Pavir.J25464 I 0.000
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I 0.000
PGSC0003DMG400028700 Solanum tuberosum PGSC0003DMG400028700 I 0.000
Pm003634 Prunus mume Pm003634 I 0.000
Pm018989 Prunus mume Pm018989 I 0.000
PRUPE_ppa007606mg Prunus persica PRUPE_ppa007606mg I 0.000
PRUPE_ppa022996mg Prunus persica PRUPE_ppa022996mg I 0.000
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I 0.000
Q1ESI9_MAIZE Zea mays Q1ESI9_MAIZE D 0.000
Sb07g023575 Sorghum bicolor Sb07g023575 I 0.000
Sb09g016150 Sorghum bicolor Sb09g016150 I 0.000
scaffold_601912.1 Arabidopsis lyrata scaffold_601912.1 I 0.000
SELMODRAFT_38498 Selaginella moellendorffii SELMODRAFT_38498 N 0.000
SELMODRAFT_38500 Selaginella moellendorffii SELMODRAFT_38500 N 0.000
Si022619m.g Setaria italica Si022619m.g I 0.000
Si024059m.g Setaria italica Si024059m.g I 0.000
Solyc04g050750.1 Solanum lycopersicum Solyc04g050750.1 I 0.000
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I 0.000
TCM_026121 Theobroma cacao TCM_026121 I 0.000
Thhalv10015907m.g Eutrema salsugineum Thhalv10015907m.g I 0.000
Thhalv10019142m.g Eutrema salsugineum Thhalv10019142m.g I 0.000
Traes_1AL_A9FB6BF52 Triticum aestivum Traes_1AL_A9FB6BF52 I 0.000
Traes_1BL_BDF0801D01 Triticum aestivum Traes_1BL_BDF0801D01 I 0.000
Traes_2AL_3FB37A3E7 Triticum aestivum Traes_2AL_3FB37A3E7 I 0.000
Traes_2BL_B397F2CE3 Triticum aestivum Traes_2BL_B397F2CE3 I 0.000
Traes_2DL_B32203C91 Triticum aestivum Traes_2DL_B32203C91 I 0.000
TRIUR3_03342 Triticum urartu TRIUR3_03342 N 0.000
TRIUR3_17409 Triticum urartu TRIUR3_17409 I 0.000
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I 0.000