Solyc12g005640.1 (Solanum lycopersicum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Solyc12g005640.1 T280291_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc12g005640.1.1 Myb 15 62
Solyc12g005640.1.1 Myb 68 113

Links

Other Myb/SANT family TFs
Other Solanum lycopersicum TFs

73 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
cassava14699.m1 Manihot esculenta cassava14699.m1 I 0.687
cassava26894.m1 Manihot esculenta cassava26894.m1 N 0.714
Ca_22597 Cicer arietinum Ca_22597 N 0.703
chr3.LjT47O18.40.nc Lotus japonicus chr3.LjT47O18.40.nc N 0.732
chr3.LjT47O18.60.nc Lotus japonicus chr3.LjT47O18.60.nc N 0.717
Ciclev10016303m.g Citrus clementina Ciclev10016303m.g I 0.728
Eucgr.A01766 Eucalyptus grandis Eucgr.A01766 I 0.680
Eucgr.A01767 Eucalyptus grandis Eucgr.A01767 I 0.692
evm.TU.supercontig_34.62 Carica papaya evm.TU.supercontig_34.62 N 0.682
gene01998-v1.0-hybrid Fragaria vesca gene01998-v1.0-hybrid N 0.743
GLYMA01G06192 Glycine max GLYMA01G06192 I 0.670
GLYMA02G12254 Glycine max GLYMA02G12254 I 0.670
GLYMA06G45520 Glycine max GLYMA06G45520 N 0.667
GLYMA06G45531 Glycine max GLYMA06G45531 N 0.694
GLYMA06G45540 Glycine max GLYMA06G45540 N 0.671
GLYMA06G45547 Glycine max GLYMA06G45547 N 0.702
GLYMA06G45554 Glycine max GLYMA06G45554 I 0.684
GLYMA12G11330 Glycine max GLYMA12G11330 I 0.684
GLYMA12G11340 Glycine max GLYMA12G11340 N 0.674
GLYMA12G11390 Glycine max GLYMA12G11390 N 0.661
GLYMA12G11490 Glycine max GLYMA12G11490 N 0.667
GLYMA12G32541 Glycine max GLYMA12G32541 N 0.717
GLYMA13G37903 Glycine max GLYMA13G37903 I 0.705
Gorai.002G016800 Gossypium raimondii Gorai.002G016800 I 0.713
Gorai.005G206800 Gossypium raimondii Gorai.005G206800 N 0.698
Gorai.008G151100 Gossypium raimondii Gorai.008G151100 I 0.683
Gorai.012G132400 Gossypium raimondii Gorai.012G132400 I 0.726
GSMUA_Achr4G28850_001 Musa acuminata GSMUA_Achr4G28850_001 I 0.676
Lus10018545.g Linum usitatissimum Lus10018545.g N 0.670
Lus10018547.g Linum usitatissimum Lus10018547.g N 0.707
Lus10031607.g Linum usitatissimum Lus10031607.g N 0.690
Lus10033738.g Linum usitatissimum Lus10033738.g N 0.711
Lus10039734.g Linum usitatissimum Lus10039734.g I 0.739
Lus10039735.g Linum usitatissimum Lus10039735.g I 0.738
Lus10039772.g Linum usitatissimum Lus10039772.g N 0.677
MDP0000155426 Malus domestica MDP0000155426 I 0.729
MDP0000407613 Malus domestica MDP0000407613 N 0.729
mgf011672m Mimulus guttatus mgf011672m I 0.665
MTR_0008s0390 Medicago truncatula MTR_0008s0390 N 0.713
MTR_0008s0470 Medicago truncatula MTR_0008s0470 N 0.676
MTR_0251s0050 Medicago truncatula MTR_0251s0050 N 0.711
MTR_1g043050 Medicago truncatula MTR_1g043050 I 0.669
MTR_2g089420 Medicago truncatula MTR_2g089420 N 0.702
MTR_2g089450 Medicago truncatula MTR_2g089450 N 0.705
orange1.1g024860m.g Citrus sinensis orange1.1g024860m.g I 0.704
orange1.1g042846m.g Citrus sinensis orange1.1g042846m.g I 0.666
PGSC0003DMG400013752 Solanum tuberosum PGSC0003DMG400013752 N 0.909
PGSC0003DMG400015087 Solanum tuberosum PGSC0003DMG400015087 N 0.714
PGSC0003DMG400026176 Solanum tuberosum PGSC0003DMG400026176 N 0.751
PGSC0003DMG400042926 Solanum tuberosum PGSC0003DMG400042926 N 0.665
PGSC0003DMG401026177 Solanum tuberosum PGSC0003DMG401026177 I 0.735
PGSC0003DMG402026177 Solanum tuberosum PGSC0003DMG402026177 I 0.730
PK24260.1 Cannabis sativa PK24260.1 N 0.719
Pm015302 Prunus mume Pm015302 N 0.725
Pm028882 Prunus mume Pm028882 I 0.664
POPTR_0013s14560 Populus trichocarpa POPTR_0013s14560 I 0.720
POPTR_0019s14120 Populus trichocarpa POPTR_0019s14120 I 0.712
POPTR_0019s14140 Populus trichocarpa POPTR_0019s14140 N 0.691
PRUPE_ppa026553mg Prunus persica PRUPE_ppa026553mg N 0.725
SapurV1A.0048s0160 Salix purpurea SapurV1A.0048s0160 N 0.720
SapurV1A.0048s0170 Salix purpurea SapurV1A.0048s0170 I 0.684
SapurV1A.0417s0130 Salix purpurea SapurV1A.0417s0130 I 0.678
SapurV1A.0417s0150 Salix purpurea SapurV1A.0417s0150 I 0.712
SapurV1A.2051s0040 Salix purpurea SapurV1A.2051s0040 I 0.684
Solyc03g093890.2 Solanum lycopersicum Solyc03g093890.2 N 0.661
Solyc03g093930.2 Solanum lycopersicum Solyc03g093930.2 N 0.665
Solyc07g053230.2 Solanum lycopersicum Solyc07g053230.2 I 0.739
Solyc07g053240.2 Solanum lycopersicum Solyc07g053240.2 I 0.724
Solyc07g054980.1 Solanum lycopersicum Solyc07g054980.1 I 0.757
Solyc07g055000.1 Solanum lycopersicum Solyc07g055000.1 N 0.713
TCM_007865 Theobroma cacao TCM_007865 I 0.715
VIT_12s0134g00480 Vitis vinifera VIT_12s0134g00480 I 0.702
VIT_12s0134g00490 Vitis vinifera VIT_12s0134g00490 I 0.712