CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TCM_001942
(
Theobroma cacao
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
TCM_001942
T280430_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK05732.1
M01276_2.00
Cannabis sativa
HNATTCBNN
NNVGAATND
PBM
Lambert et al.(2019)
pTH11367
0.699
0.787
AT1G14600
M01268_2.00
Arabidopsis thaliana
NWAYATTCYN
NRGAATRTWN
PBM
Lambert et al.(2019)
pTH11557
0.679
0.745
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EOX93098
Myb
22
72
RLRWTPELHHQFVQAVDCLGGKYKATPKRILQMMSVKGLRISHIKSHLQRQ
EOX93099
Myb
38
89
RLRWTPELHHQFVQAVDCLGGKYKATPKRILQMMSVKGLRISHIKSHLQMYR
Links
Other
Myb/SANT
family TFs
Other
Theobroma cacao
TFs
236 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0002s05770
Populus trichocarpa
POPTR_0002s05770
I
0.771
ORUFI06G26110
Oryza rufipogon
ORUFI06G26110
N
0.757
OBART06G24290
Oryza barthii
OBART06G24290
N
0.757
Sb10g026930
Sorghum bicolor
Sb10g026930
N
0.757
OLONG_026929
Oryza longistaminata
OLONG_026929
N
0.757
OMERI06G24530
Oryza meridionalis
OMERI06G24530
N
0.757
LPERR06G20200
Leersia perrieri
LPERR06G20200
N
0.757
OGLUM06G25550
Oryza glumaepatula
OGLUM06G25550
N
0.757
Si007179m.g
Setaria italica
Si007179m.g
N
0.757
GRMZM2G454449
Zea mays
GRMZM2G454449
N
0.757
Pavir.Db00422
Panicum virgatum
Pavir.Db00422
N
0.757
ORGLA06G0204400
Oryza glaberrima
ORGLA06G0204400
N
0.757
Pavir.Da00200
Panicum virgatum
Pavir.Da00200
N
0.757
ONIVA06G30620
Oryza nivara
ONIVA06G30620
N
0.757
OPUNC06G22010
Oryza punctata
OPUNC06G22010
N
0.757
BGIOSGA023442
Oryza indica
BGIOSGA023442
N
0.752
OS06G0670300
Oryza sativa
OS06G0670300
N
0.752
MLOC_53958
Hordeum vulgare
MLOC_53958
N
0.751
MLOC_53840
Hordeum vulgare
MLOC_53840
N
0.751
MLOC_67085
Hordeum vulgare
MLOC_67085
N
0.751
Traes_7DL_FEA7D3672
Triticum aestivum
Traes_7DL_FEA7D3672
N
0.751
F775_02595
Aegilops tauschii
F775_02595
N
0.751
Traes_7AL_BF6FD97DA
Triticum aestivum
Traes_7AL_BF6FD97DA
N
0.751
SapurV1A.0354s0280
Salix purpurea
SapurV1A.0354s0280
I
0.744
BRADI1G32370
Brachypodium distachyon
BRADI1G32370
N
0.743
Pm014775
Prunus mume
Pm014775
I
0.741
Eucgr.A02031
Eucalyptus grandis
Eucgr.A02031
I
0.735
F775_04777
Aegilops tauschii
F775_04777
I
0.731
F775_03870
Aegilops tauschii
F775_03870
I
0.731
TRIUR3_34172
Triticum urartu
TRIUR3_34172
I
0.731
Traes_7AL_9A1395EC7
Triticum aestivum
Traes_7AL_9A1395EC7
I
0.731
MDP0000244794
Malus domestica
MDP0000244794
I
0.725
Lus10001149.g
Linum usitatissimum
Lus10001149.g
I
0.723
Eucgr.D01346
Eucalyptus grandis
Eucgr.D01346
I
0.720
GRMZM2G100709
Zea mays
GRMZM2G100709
N
0.716
PRUPE_ppa023518mg
Prunus persica
PRUPE_ppa023518mg
I
0.709
OB06G32040
Oryza brachyantha
OB06G32040
N
0.708
VIT_00s1624g00010
Vitis vinifera
VIT_00s1624g00010
I
0.707
TCM_030248
Theobroma cacao
TCM_030248
I
0.705
SapurV1A.3361s0010
Salix purpurea
SapurV1A.3361s0010
I
0.705
Thhalv10017090m.g
Eutrema salsugineum
Thhalv10017090m.g
I
0.705
SapurV1A.0429s0100
Salix purpurea
SapurV1A.0429s0100
I
0.705
cassava15362.m1
Manihot esculenta
cassava15362.m1
I
0.705
POPTR_0004s01060
Populus trichocarpa
POPTR_0004s01060
I
0.705
PRUPE_ppa015662mg
Prunus persica
PRUPE_ppa015662mg
I
0.705
PGSC0003DMG400029440
Solanum tuberosum
PGSC0003DMG400029440
I
0.701
POPTR_0010s10990
Populus trichocarpa
POPTR_0010s10990
I
0.701
GSMUA_Achr5G19200_001
Musa acuminata
GSMUA_Achr5G19200_001
I
0.701
GLYMA18G14071
Glycine max
GLYMA18G14071
I
0.700
PK05732.1
Cannabis sativa
PK05732.1
D
0.699
Gorai.009G329400
Gossypium raimondii
Gorai.009G329400
I
0.699
TRIUR3_18893
Triticum urartu
TRIUR3_18893
N
0.698
Bra026618
Brassica rapa
Bra026618
I
0.697
MTR_2g016220
Medicago truncatula
MTR_2g016220
I
0.697
fgenesh2_kg.5__121__AT2G02060.1
Arabidopsis lyrata
fgenesh2_kg.5__121__AT2G02060.1
I
0.697
Thhalv10004791m.g
Eutrema salsugineum
Thhalv10004791m.g
I
0.697
Cagra.0549s0004
Capsella grandiflora
Cagra.0549s0004
I
0.697
Carubv10017538m.g
Capsella rubella
Carubv10017538m.g
I
0.697
AT2G02060
Arabidopsis thaliana
AT2G02060
I
0.697
Bostr.0556s0031
Boechera stricta
Bostr.0556s0031
I
0.697
POPTR_0021s00430
Populus trichocarpa
POPTR_0021s00430
I
0.693
GLYMA08G41735
Glycine max
GLYMA08G41735
I
0.692
OPUNC02G25130
Oryza punctata
OPUNC02G25130
I
0.691
LPERR02G22340
Leersia perrieri
LPERR02G22340
I
0.691
OGLUM02G28020
Oryza glumaepatula
OGLUM02G28020
I
0.691
ONIVA02G30300
Oryza nivara
ONIVA02G30300
I
0.691
OLONG_000346
Oryza longistaminata
OLONG_000346
I
0.691
Si011884m.g
Setaria italica
Si011884m.g
I
0.691
ORGLA02G0236600
Oryza glaberrima
ORGLA02G0236600
I
0.691
BGIOSGA008790
Oryza indica
BGIOSGA008790
I
0.691
OMERI02G26760
Oryza meridionalis
OMERI02G26760
I
0.691
OBART02G27470
Oryza barthii
OBART02G27470
I
0.691
Bo7g080160
Brassica oleracea
Bo7g080160
I
0.691
Pavir.J09702
Panicum virgatum
Pavir.J09702
I
0.691
Bra024836
Brassica rapa
Bra024836
I
0.691
ORUFI02G28930
Oryza rufipogon
ORUFI02G28930
I
0.691
Bo2g134900
Brassica oleracea
Bo2g134900
I
0.689
29842.m003572
Ricinus communis
29842.m003572
I
0.687
Gorai.010G181100
Gossypium raimondii
Gorai.010G181100
I
0.687
GLYMA15G11576
Glycine max
GLYMA15G11576
I
0.687
orange1.1g029903m.g
Citrus sinensis
orange1.1g029903m.g
I
0.687
GLYMA09G00685
Glycine max
GLYMA09G00685
I
0.687
Ca_00645
Cicer arietinum
Ca_00645
I
0.687
Ciclev10032941m.g
Citrus clementina
Ciclev10032941m.g
I
0.687
PDK_20s1498711g001
Phoenix dactylifera
PDK_20s1498711g001
I
0.687
VIT_12s0028g00980
Vitis vinifera
VIT_12s0028g00980
I
0.684
Sb01g048420
Sorghum bicolor
Sb01g048420
I
0.683
ORUFI10G18320
Oryza rufipogon
ORUFI10G18320
I
0.683
POPTR_0005s22750
Populus trichocarpa
POPTR_0005s22750
N
0.683
AMTR_s00044p00042560
Amborella trichopoda
AMTR_s00044p00042560
I
0.683
Si036127m.g
Setaria italica
Si036127m.g
I
0.683
Cucsa.058770
Cucumis sativus
Cucsa.058770
I
0.683
Pavir.Ia04483
Panicum virgatum
Pavir.Ia04483
I
0.683
BGIOSGA011527
Oryza indica
BGIOSGA011527
I
0.683
Pavir.Ib00180
Panicum virgatum
Pavir.Ib00180
I
0.683
SapurV1A.0203s0150
Salix purpurea
SapurV1A.0203s0150
I
0.683
chr5.LjT14K23.60.nc
Lotus japonicus
chr5.LjT14K23.60.nc
I
0.683
PK23854.1
Cannabis sativa
PK23854.1
I
0.683
BGIOSGA031479
Oryza indica
BGIOSGA031479
I
0.683
evm.TU.supercontig_2.82
Carica papaya
evm.TU.supercontig_2.82
I
0.683
29780.m001368
Ricinus communis
29780.m001368
I
0.683
Cla017202
Citrullus lanatus
Cla017202
I
0.683
cassava20298.m1
Manihot esculenta
cassava20298.m1
I
0.683
GRMZM2G374986
Zea mays
GRMZM2G374986
I
0.683
Aquca_002_01368
Aquilegia coerulea
Aquca_002_01368
I
0.683
VIT_01s0137g00050
Vitis vinifera
VIT_01s0137g00050
I
0.683
TCM_011166
Theobroma cacao
TCM_011166
I
0.683
GRMZM5G887276
Zea mays
GRMZM5G887276
I
0.683
OBART10G17270
Oryza barthii
OBART10G17270
I
0.683
OPUNC03G02160
Oryza punctata
OPUNC03G02160
I
0.683
OLONG_011732
Oryza longistaminata
OLONG_011732
I
0.683
OPUNC10G15550
Oryza punctata
OPUNC10G15550
I
0.683
OB10G24340
Oryza brachyantha
OB10G24340
I
0.683
ORGLA03G0021400
Oryza glaberrima
ORGLA03G0021400
I
0.683
ONIVA10G19340
Oryza nivara
ONIVA10G19340
I
0.683
GSMUA_Achr11G01510_001
Musa acuminata
GSMUA_Achr11G01510_001
I
0.683
GSMUA_Achr2G11010_001
Musa acuminata
GSMUA_Achr2G11010_001
I
0.683
OMERI03G02220
Oryza meridionalis
OMERI03G02220
I
0.683
OMERI10G13750
Oryza meridionalis
OMERI10G13750
I
0.683
OLONG_004539
Oryza longistaminata
OLONG_004539
I
0.683
ONIVA03G01980
Oryza nivara
ONIVA03G01980
I
0.683
OGLUM03G02310
Oryza glumaepatula
OGLUM03G02310
I
0.683
OB03G12320
Oryza brachyantha
OB03G12320
I
0.683
OBART03G02370
Oryza barthii
OBART03G02370
I
0.683
ORUFI03G02110
Oryza rufipogon
ORUFI03G02110
I
0.683
ORGLA10G0122800
Oryza glaberrima
ORGLA10G0122800
I
0.683
LPERR10G13190
Leersia perrieri
LPERR10G13190
I
0.683
LPERR03G02180
Leersia perrieri
LPERR03G02180
I
0.683
mgf023762m
Mimulus guttatus
mgf023762m
I
0.681
VIT_13s0067g01500
Vitis vinifera
VIT_13s0067g01500
I
0.681
Pavir.Gb01051
Panicum virgatum
Pavir.Gb01051
I
0.680
Bra026202
Brassica rapa
Bra026202
I
0.679
fgenesh2_kg.1__1592__AT1G14600.1
Arabidopsis lyrata
fgenesh2_kg.1__1592__AT1G14600.1
I
0.679
Carubv10010057m.g
Capsella rubella
Carubv10010057m.g
I
0.679
Bostr.24340s0004
Boechera stricta
Bostr.24340s0004
I
0.679
AT1G14600
Arabidopsis thaliana
AT1G14600
D
0.679
Thhalv10008620m.g
Eutrema salsugineum
Thhalv10008620m.g
I
0.679
Cagra.3501s0036
Capsella grandiflora
Cagra.3501s0036
I
0.679
Bo5g019810
Brassica oleracea
Bo5g019810
I
0.679
MDP0000214282
Malus domestica
MDP0000214282
I
0.679
MDP0000196504
Malus domestica
MDP0000196504
I
0.679
MTR_2g023580
Medicago truncatula
MTR_2g023580
I
0.679
GSMUA_Achr7G03510_001
Musa acuminata
GSMUA_Achr7G03510_001
I
0.678
gene00600-v1.0-hybrid
Fragaria vesca
gene00600-v1.0-hybrid
I
0.676
SapurV1A.0076s0110
Salix purpurea
SapurV1A.0076s0110
N
0.673
SapurV1A.1979s0020
Salix purpurea
SapurV1A.1979s0020
N
0.673
Pavir.Ab02674
Panicum virgatum
Pavir.Ab02674
I
0.672
Pavir.Aa00827
Panicum virgatum
Pavir.Aa00827
I
0.672
Pm009670
Prunus mume
Pm009670
I
0.672
GRMZM2G106185
Zea mays
GRMZM2G106185
I
0.672
evm.TU.supercontig_2794.2
Carica papaya
evm.TU.supercontig_2794.2
I
0.672
Sb06g025600
Sorghum bicolor
Sb06g025600
I
0.666
ORGLA12G0000900
Oryza glaberrima
ORGLA12G0000900
I
0.666
OBART12G00180
Oryza barthii
OBART12G00180
I
0.666
Gorai.009G161800
Gossypium raimondii
Gorai.009G161800
I
0.666
SapurV1A.0015s0960
Salix purpurea
SapurV1A.0015s0960
I
0.665
Pavir.J33581
Panicum virgatum
Pavir.J33581
I
0.665
cassava27240.m1
Manihot esculenta
cassava27240.m1
I
0.665
orange1.1g020303m.g
Citrus sinensis
orange1.1g020303m.g
I
0.665
MTR_1g112370
Medicago truncatula
MTR_1g112370
I
0.665
Ciclev10005466m.g
Citrus clementina
Ciclev10005466m.g
I
0.665
MTR_0223s0040
Medicago truncatula
MTR_0223s0040
I
0.665
Gorai.002G169300
Gossypium raimondii
Gorai.002G169300
I
0.665
SapurV1A.0067s0500
Salix purpurea
SapurV1A.0067s0500
I
0.665
GSMUA_AchrUn_randomG06480_001
Musa acuminata
GSMUA_AchrUn_randomG06480_001
I
0.665
Eucgr.B02627
Eucalyptus grandis
Eucgr.B02627
I
0.665
mgf019744m
Mimulus guttatus
mgf019744m
I
0.665
Ca_05422
Cicer arietinum
Ca_05422
I
0.665
GLYMA20G00861
Glycine max
GLYMA20G00861
I
0.665
GLYMA07G19585
Glycine max
GLYMA07G19585
I
0.665
Traes_1BL_E2629CBC1
Triticum aestivum
Traes_1BL_E2629CBC1
I
0.665
Ca_14800
Cicer arietinum
Ca_14800
I
0.665
GLYMA20G24290
Glycine max
GLYMA20G24290
I
0.665
Pm010236
Prunus mume
Pm010236
I
0.665
Si039234m.g
Setaria italica
Si039234m.g
I
0.665
OB06G25370
Oryza brachyantha
OB06G25370
I
0.664
SELMODRAFT_414222
Selaginella moellendorffii
SELMODRAFT_414222
I
0.664
OB02G19030
Oryza brachyantha
OB02G19030
I
0.664
SELMODRAFT_438636
Selaginella moellendorffii
SELMODRAFT_438636
I
0.664
Pavir.Db01175
Panicum virgatum
Pavir.Db01175
I
0.664
BGIOSGA021086
Oryza indica
BGIOSGA021086
I
0.664
SELMODRAFT_422768
Selaginella moellendorffii
SELMODRAFT_422768
I
0.664
Pavir.Ab01097
Panicum virgatum
Pavir.Ab01097
I
0.664
Sb10g021360
Sorghum bicolor
Sb10g021360
I
0.664
SELMODRAFT_426960
Selaginella moellendorffii
SELMODRAFT_426960
I
0.664
Pavir.Aa02813
Panicum virgatum
Pavir.Aa02813
I
0.664
Pavir.Da00896
Panicum virgatum
Pavir.Da00896
I
0.664
GLYMA15G08970
Glycine max
GLYMA15G08970
I
0.664
LPERR02G08660
Leersia perrieri
LPERR02G08660
I
0.664
PGSC0003DMG400028830
Solanum tuberosum
PGSC0003DMG400028830
I
0.664
LPERR11G00400
Leersia perrieri
LPERR11G00400
I
0.664
PK26966.1
Cannabis sativa
PK26966.1
I
0.664
OS02G0241200
Oryza sativa
OS02G0241200
I
0.664
OS06G0543200
Oryza sativa
OS06G0543200
I
0.664
ORUFI02G10190
Oryza rufipogon
ORUFI02G10190
I
0.664
POPTR_0010s19310
Populus trichocarpa
POPTR_0010s19310
I
0.664
ORGLA02G0091700
Oryza glaberrima
ORGLA02G0091700
I
0.664
ORGLA06G0148100
Oryza glaberrima
ORGLA06G0148100
I
0.664
GRMZM2G477238
Zea mays
GRMZM2G477238
I
0.664
BGIOSGA007863
Oryza indica
BGIOSGA007863
I
0.664
SapurV1A.0650s0140
Salix purpurea
SapurV1A.0650s0140
I
0.664
Sb04g008670
Sorghum bicolor
Sb04g008670
I
0.664
Si016955m.g
Setaria italica
Si016955m.g
I
0.664
OGLUM02G02260
Oryza glumaepatula
OGLUM02G02260
I
0.664
TRIUR3_10881
Triticum urartu
TRIUR3_10881
I
0.664
Carubv10024503m.g
Capsella rubella
Carubv10024503m.g
I
0.664
F775_29879
Aegilops tauschii
F775_29879
I
0.664
OPUNC06G16010
Oryza punctata
OPUNC06G16010
I
0.664
Ciclev10011992m.g
Citrus clementina
Ciclev10011992m.g
I
0.664
ONIVA06G21150
Oryza nivara
ONIVA06G21150
I
0.664
Cagra.0202s0047
Capsella grandiflora
Cagra.0202s0047
I
0.664
ORUFI06G18740
Oryza rufipogon
ORUFI06G18740
I
0.664
29814.m000747
Ricinus communis
29814.m000747
I
0.664
ONIVA02G11280
Oryza nivara
ONIVA02G11280
I
0.664
OGLUM06G18870
Oryza glumaepatula
OGLUM06G18870
I
0.664
Bostr.25993s0515
Boechera stricta
Bostr.25993s0515
I
0.664
Ca_08598
Cicer arietinum
Ca_08598
I
0.664
Traes_4DS_99EC36CD4
Triticum aestivum
Traes_4DS_99EC36CD4
I
0.664
Traes_4AL_72ECC7747
Triticum aestivum
Traes_4AL_72ECC7747
I
0.664
Gorai.012G117800
Gossypium raimondii
Gorai.012G117800
I
0.664
OBART06G17710
Oryza barthii
OBART06G17710
I
0.664
Lus10002207.g
Linum usitatissimum
Lus10002207.g
I
0.664
Lus10012239.g
Linum usitatissimum
Lus10012239.g
I
0.664
OBART02G10190
Oryza barthii
OBART02G10190
I
0.664
OLONG_024611
Oryza longistaminata
OLONG_024611
I
0.664
orange1.1g017464m.g
Citrus sinensis
orange1.1g017464m.g
I
0.664
GSMUA_Achr7G13880_001
Musa acuminata
GSMUA_Achr7G13880_001
I
0.664
Bo3g036170
Brassica oleracea
Bo3g036170
I
0.664
LPERR06G14620
Leersia perrieri
LPERR06G14620
I
0.664
TCM_001726
Theobroma cacao
TCM_001726
I
0.664
Solyc12g006280.1
Solanum lycopersicum
Solyc12g006280.1
I
0.664
GLYMA14G03527
Glycine max
GLYMA14G03527
I
0.662
Solyc04g008480.1
Solanum lycopersicum
Solyc04g008480.1
I
0.661
GSMUA_Achr7G22410_001
Musa acuminata
GSMUA_Achr7G22410_001
I
0.661
PRUPE_ppa014847mg
Prunus persica
PRUPE_ppa014847mg
I
0.661