TCM_002550 (Theobroma cacao)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 TCM_002550 T280433_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EOX93662 Myb 57 105
EOX93663 Myb 57 105
EOX93664 Myb 57 106

Links

Other Myb/SANT family TFs
Other Theobroma cacao TFs

58 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0014s17210 Populus trichocarpa POPTR_0014s17210 N 0.839
orange1.1g024388m.g Citrus sinensis orange1.1g024388m.g N 0.834
Gorai.007G162200 Gossypium raimondii Gorai.007G162200 N 0.820
F775_32546 Aegilops tauschii F775_32546 N 0.803
Traes_2DL_B72450387 Triticum aestivum Traes_2DL_B72450387 N 0.803
Traes_2BL_7B5109B55 Triticum aestivum Traes_2BL_7B5109B55 N 0.803
Traes_2AL_6990211D0 Triticum aestivum Traes_2AL_6990211D0 N 0.795
Gorai.N001000 Gossypium raimondii Gorai.N001000 N 0.790
Ciclev10016354m.g Citrus clementina Ciclev10016354m.g N 0.785
Gorai.004G060500 Gossypium raimondii Gorai.004G060500 N 0.784
Thhalv10021333m.g Eutrema salsugineum Thhalv10021333m.g N 0.783
Bo1g147290 Brassica oleracea Bo1g147290 N 0.783
Bo3g061340 Brassica oleracea Bo3g061340 N 0.783
Bra001258 Brassica rapa Bra001258 N 0.783
Bra029658 Brassica rapa Bra029658 N 0.783
Bra040015 Brassica rapa Bra040015 N 0.783
Sb06g021360 Sorghum bicolor Sb06g021360 N 0.782
30005.m001261 Ricinus communis 30005.m001261 N 0.770
GSMUA_Achr3G19260_001 Musa acuminata GSMUA_Achr3G19260_001 N 0.764
Lus10025582.g Linum usitatissimum Lus10025582.g N 0.754
mgf025428m Mimulus guttatus mgf025428m N 0.748
GRMZM2G053557 Zea mays GRMZM2G053557 N 0.747
OMERI04G14610 Oryza meridionalis OMERI04G14610 N 0.744
ONIVA04G15620 Oryza nivara ONIVA04G15620 N 0.744
OGLUM04G17350 Oryza glumaepatula OGLUM04G17350 N 0.744
OBART04G17310 Oryza barthii OBART04G17310 N 0.744
ORGLA04G0144300 Oryza glaberrima ORGLA04G0144300 N 0.744
ORUFI04G18740 Oryza rufipogon ORUFI04G18740 N 0.744
BGIOSGA014805 Oryza indica BGIOSGA014805 N 0.744
OLONG_009317 Oryza longistaminata OLONG_009317 N 0.744
Lus10027045.g Linum usitatissimum Lus10027045.g N 0.743
Lus10025581.g Linum usitatissimum Lus10025581.g N 0.743
cassava24109.valid.m1 Manihot esculenta cassava24109.valid.m1 N 0.735
Si010917m.g Setaria italica Si010917m.g N 0.733
Pavir.Ga01503 Panicum virgatum Pavir.Ga01503 N 0.733
OPUNC04G15120 Oryza punctata OPUNC04G15120 N 0.733
Solyc09g020000.2 Solanum lycopersicum Solyc09g020000.2 N 0.719
Solyc08g013980.2 Solanum lycopersicum Solyc08g013980.2 N 0.717
PGSC0003DMG400020996 Solanum tuberosum PGSC0003DMG400020996 N 0.717
Gorai.011G138900 Gossypium raimondii Gorai.011G138900 N 0.716
Pavir.J08977 Panicum virgatum Pavir.J08977 N 0.711
LPERR04G13890 Leersia perrieri LPERR04G13890 N 0.710
Aquca_108_00051 Aquilegia coerulea Aquca_108_00051 N 0.709
orange1.1g025458m.g Citrus sinensis orange1.1g025458m.g N 0.706
Ciclev10021850m.g Citrus clementina Ciclev10021850m.g N 0.706
TCM_019960 Theobroma cacao TCM_019960 N 0.703
TCM_019968 Theobroma cacao TCM_019968 N 0.703
fgenesh2_kg.3__781__AT3G07565.3 Arabidopsis lyrata fgenesh2_kg.3__781__AT3G07565.3 N 0.694
AT3G07565 Arabidopsis thaliana AT3G07565 N 0.694
Cagra.0133s0101 Capsella grandiflora Cagra.0133s0101 N 0.694
Bostr.22252s0273 Boechera stricta Bostr.22252s0273 N 0.694
Carubv10014434m.g Capsella rubella Carubv10014434m.g N 0.694
mgf000871m Mimulus guttatus mgf000871m N 0.687
GSMUA_Achr6G28720_001 Musa acuminata GSMUA_Achr6G28720_001 N 0.682
Cla012999 Citrullus lanatus Cla012999 N 0.681
GSMUA_Achr9G08210_001 Musa acuminata GSMUA_Achr9G08210_001 N 0.674
MTR_2g099155 Medicago truncatula MTR_2g099155 N 0.673