TCM_007904 (Theobroma cacao)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 TCM_007904 T280459_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK28187.1
M01286_2.00
Cannabis sativa
TACCTACC

GGTAGGTA
PBM
Lambert et al.(2019)
pTH11305
0.822 0.935
AtMYB74
M07104_2.00
Arabidopsis thaliana
NYYYACCTAMYWHH

DDWRKTAGGTRRRN
Dap-seq
OMalley et al.(2016)
MYB74_colamp_a
0.822 0.914
AtMYB74
M07105_2.00
Arabidopsis thaliana
BYHYACCTAMYHHH

DDDRKTAGGTRDRV
Dap-seq
OMalley et al.(2016)
MYB74_col
0.822 0.914
AtMYB41
M07109_2.00
Arabidopsis thaliana
DHDBBYYACCTAMYW

WRKTAGGTRRVVHDH
Dap-seq
OMalley et al.(2016)
MYB41_col_a
0.812 0.882
MYB49
M07140_2.00
Arabidopsis thaliana
HDBBYYACCWAMYWH

DWRKTWGGTRRVVHD
Dap-seq
OMalley et al.(2016)
MYB49_col_a
0.768 0.860
MYB49
M07141_2.00
Arabidopsis thaliana
NYYYACCTAMYWHN

NDWRKTAGGTRRRN
Dap-seq
OMalley et al.(2016)
MYB49_colamp_a
0.768 0.860
MYB39
M07106_2.00
Arabidopsis thaliana
NYYYACCTAMYWHH

DDWRKTAGGTRRRN
Dap-seq
OMalley et al.(2016)
MYB39_col_a
0.701 0.742
MYB39
M07107_2.00
Arabidopsis thaliana
NYYYACCWAMYWHHHHHHHNH

DNDDDDDDDWRKTWGGTRRRN
Dap-seq
OMalley et al.(2016)
MYB39_colamp_a
0.701 0.742
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOX99281 Myb 68 115
EOX99281 Myb 121 166

Links

Other Myb/SANT family TFs
Other Theobroma cacao TFs

373 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30138.m004061 Ricinus communis 30138.m004061 I 0.000
AGL33 Populus trichocarpa POPTR_0018s08400 N 0.000
Bo8g068060 Brassica oleracea Bo8g068060 I 0.000
Bo8g104060 Brassica oleracea Bo8g104060 I 0.000
Bra016544 Brassica rapa Bra016544 I 0.000
Bra031049 Brassica rapa Bra031049 I 0.000
cassava19791.m1 Manihot esculenta cassava19791.m1 I 0.000
Gorai.010G096100 Gossypium raimondii Gorai.010G096100 N 0.000
Gorai.010G096200 Gossypium raimondii Gorai.010G096200 N 0.000
Gorai.012G090000 Gossypium raimondii Gorai.012G090000 N 0.000
Gorai.012G090100 Gossypium raimondii Gorai.012G090100 N 0.000
Gorai.012G090200 Gossypium raimondii Gorai.012G090200 N 0.000
Gorai.012G090300 Gossypium raimondii Gorai.012G090300 N 0.000
Gorai.012G090600 Gossypium raimondii Gorai.012G090600 N 0.000
TCM_037394 Theobroma cacao TCM_037394 N 0.000