TCM_016909 (Theobroma cacao)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 TCM_016909 T280521_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB118
M07087_2.00 		Arabidopsis thaliana
DHWDHRDMCGTTACDWW
WWHGTAACGKHYDHWDH		 Dap-seq
OMalley et al.(2016)
MYB118_col_a 		0.763 0.857
MYB118
M07088_2.00 		Arabidopsis thaliana
DWWWYGTAACGKHYR
YRDMCGTTACRWWWH		 Dap-seq
OMalley et al.(2016)
MYB118_colamp_a 		0.763 0.857
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY02441 Myb 234 271
EOY02441 Myb 277 322

Links

Other Myb/SANT family TFs
Other Theobroma cacao TFs

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.001G263600 Gossypium raimondii Gorai.001G263600 I 0.823
Thhalv10005564m.g Eutrema salsugineum Thhalv10005564m.g I 0.811
evm.TU.supercontig_108.29 Carica papaya evm.TU.supercontig_108.29 I 0.811
Carubv10018693m.g Capsella rubella Carubv10018693m.g I 0.809
Cagra.11216s0002 Capsella grandiflora Cagra.11216s0002 I 0.809
Bostr.0556s0457 Boechera stricta Bostr.0556s0457 I 0.802
Bra025299 Brassica rapa Bra025299 I 0.784
GLYMA16G07927 Glycine max GLYMA16G07927 I 0.769
MYB118 Arabidopsis thaliana AT3G27785 D 0.763
MYB118 Arabidopsis lyrata fgenesh2_kg.5__560__AT3G27785.1 I 0.763
PRUPE_ppa019507mg Prunus persica PRUPE_ppa019507mg I 0.740
GLYMA19G13923 Glycine max GLYMA19G13923 I 0.739
Bra033027 Brassica rapa Bra033027 I 0.737
Pm015681 Prunus mume Pm015681 I 0.731
GSMUA_Achr3G19490_001 Musa acuminata GSMUA_Achr3G19490_001 I 0.731
Bo2g144970 Brassica oleracea Bo2g144970 I 0.730
MYB98 Vitis vinifera VIT_17s0000g08550 I 0.724
mg025334m Mimulus guttatus mg025334m I 0.717
Cla010586 Citrullus lanatus Cla010586 I 0.716
VIT_14s0066g01010 Vitis vinifera VIT_14s0066g01010 I 0.714
Solyc06g071520.1 Solanum lycopersicum Solyc06g071520.1 I 0.714
PGSC0003DMG400036895 Solanum tuberosum PGSC0003DMG400036895 I 0.714
Lus10042111.g Linum usitatissimum Lus10042111.g I 0.714
orange1.1g044021m.g Citrus sinensis orange1.1g044021m.g I 0.709
Ciclev10017526m.g Citrus clementina Ciclev10017526m.g I 0.709
cassava19706.m1 Manihot esculenta cassava19706.m1 I 0.705
Eucgr.B00301 Eucalyptus grandis Eucgr.B00301 I 0.705
PRUPE_ppa026791mg Prunus persica PRUPE_ppa026791mg I 0.705
Pm024743 Prunus mume Pm024743 I 0.705
SapurV1A.0571s0110 Salix purpurea SapurV1A.0571s0110 I 0.703
Ca_19427 Cicer arietinum Ca_19427 I 0.701
29917.m001977 Ricinus communis 29917.m001977 I 0.699
MTR_3g077650 Medicago truncatula MTR_3g077650 I 0.699
GSMUA_Achr6G06490_001 Musa acuminata GSMUA_Achr6G06490_001 I 0.696
cassava9008.m1 Manihot esculenta cassava9008.m1 I 0.694
Lus10002384.g Linum usitatissimum Lus10002384.g I 0.693
Cla019490 Citrullus lanatus Cla019490 I 0.692
Cucsa.196850 Cucumis sativus Cucsa.196850 I 0.689
MYB118 Populus trichocarpa POPTR_0001s35140 I 0.687
GLYMA05G02300 Glycine max GLYMA05G02300 I 0.687
MDP0000199939 Malus domestica MDP0000199939 I 0.686
Traes_7DS_E27ECBC6E Triticum aestivum Traes_7DS_E27ECBC6E I 0.684
evm.TU.supercontig_76.38 Carica papaya evm.TU.supercontig_76.38 I 0.683
AMTR_s00096p00076220 Amborella trichopoda AMTR_s00096p00076220 I 0.682
mgf024290m Mimulus guttatus mgf024290m I 0.682
Ciclev10024427m.g Citrus clementina Ciclev10024427m.g I 0.680
TCM_012087 Theobroma cacao TCM_012087 I 0.680
gene32198-v1.0-hybrid Fragaria vesca gene32198-v1.0-hybrid I 0.680
MDP0000215359 Malus domestica MDP0000215359 I 0.680
30147.m013937 Ricinus communis 30147.m013937 I 0.680
cassava33974.m1 Manihot esculenta cassava33974.m1 I 0.680
orange1.1g046859m.g Citrus sinensis orange1.1g046859m.g I 0.680
Ca_17294 Cicer arietinum Ca_17294 I 0.679
mgf023372m Mimulus guttatus mgf023372m I 0.675
MTR_7g037260 Medicago truncatula MTR_7g037260 I 0.675
GRMZM2G302549 Zea mays GRMZM2G302549 I 0.672
PGSC0003DMG400018092 Solanum tuberosum PGSC0003DMG400018092 I 0.672
Solyc03g112890.1 Solanum lycopersicum Solyc03g112890.1 I 0.672
DAPPUDRAFT_6813 Daphnia pulex DAPPUDRAFT_6813 N 0.669
MDP0000319656 Malus domestica MDP0000319656 I 0.665
Pm000541 Prunus mume Pm000541 I 0.665
GSMUA_Achr3G09050_001 Musa acuminata GSMUA_Achr3G09050_001 N 0.665
gene08006-v1.0-hybrid Fragaria vesca gene08006-v1.0-hybrid I 0.665
PRUPE_ppa018123mg Prunus persica PRUPE_ppa018123mg I 0.665
Ca_17087 Cicer arietinum Ca_17087 I 0.662
SapurV1A.0396s0170 Salix purpurea SapurV1A.0396s0170 I 0.662
Lus10005864.g Linum usitatissimum Lus10005864.g I 0.661