TCM_021796 (Theobroma cacao)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 TCM_021796 T280546_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK07741.1
M01277_2.00
Cannabis sativa
HAMCBRHHN

NDDYVGKTD
PBM
Lambert et al.(2019)
pTH11469
0.781 0.892
OS02G0187700
M02327_2.00
Oryza sativa
NTAMCKGTHN

NDACMGKTAN
PBM
Weirauch et al.(2014)
pTH8645
0.706 0.753
MYB1
M07068_2.00
Arabidopsis thaliana
HDNNDNHWHWAACSGYHWH

DWDRCSGTTWDWDNHNNHD
Dap-seq
OMalley et al.(2016)
MYB1_col_a
0.705 0.806
AtMYB70
M01071_2.00
Arabidopsis thaliana
HAACBRHHN

NDDYVGTTD
PBM
Sullivan et al.(2014)
pTH8588
0.664 0.763
PK28565.1
M02357_2.00
Cannabis sativa
TAACBGTY

RACVGTTA
PBM
Weirauch et al.(2014)
pTH9653
0.664 0.763
AtMYB70
M07048_2.00
Arabidopsis thaliana
YAACBGWHWWAAMN

NKTTWWDWCVGTTR
Dap-seq
OMalley et al.(2016)
MYB70_col_a
0.664 0.763
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY07337 Myb 55 101
EOY07337 Myb 107 152

Links

Other Myb/SANT family TFs
Other Theobroma cacao TFs

233 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ANCCAN_14401 Ancylostoma caninum ANCCAN_14401 N 0.000
ANCCEY_09441 Ancylostoma ceylanicum ANCCEY_09441 N 0.000
ANCDUO_23542 Ancylostoma duodenale ANCDUO_23542 N 0.000
CGOC_0000327101 Cylicostephanus goldi CGOC_0000327101 N 0.000
HCOI01015500 Haemonchus contortus HCOI01015500 N 0.000
HPLM_0001195501 Haemonchus placei HPLM_0001195501 N 0.000
HPBE_0000032801 Heligmosomoides bakeri HPBE_0000032801 N 0.000
NBR_0001915401 Nippostrongylus brasiliensis NBR_0001915401 N 0.000