TCM_022293 (Theobroma cacao)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 TCM_022293 T280553_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB27
M07097_2.00 		Arabidopsis thaliana
HHTACCTAAYTTWWN
NWWAARTTAGGTADD		 Dap-seq
OMalley et al.(2016)
MYB27_col_a 		0.708 0.753
MYB27
M07098_2.00 		Arabidopsis thaliana
NYHTACCTAAYTTWHN
NDWAARTTAGGTADRN		 Dap-seq
OMalley et al.(2016)
MYB27_colamp_a 		0.708 0.753
MYB59
M00883_2.00 		Arabidopsis thaliana
NKACCTAAYN
NRTTAGGTMN		 PBM
Franco-Zorrilla et al.(2014)
MYB59 		0.668 0.677
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY07961 Myb 16 63
EOY07961 Myb 69 114

Links

Other Myb/SANT family TFs
Other Theobroma cacao TFs

139 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.009G413600 Gossypium raimondii Gorai.009G413600 I 0.810
AtMYB27 Vitis vinifera VIT_08s0007g04830 I 0.808
Aquca_030_00038 Aquilegia coerulea Aquca_030_00038 I 0.790
PK10274.1 Cannabis sativa PK10274.1 I 0.787
evm.TU.supercontig_92.99 Carica papaya evm.TU.supercontig_92.99 I 0.760
Cagra.0612s0043 Capsella grandiflora Cagra.0612s0043 I 0.753
Carubv10019409m.g Capsella rubella Carubv10019409m.g I 0.753
Bostr.9544s0002 Boechera stricta Bostr.9544s0002 I 0.753
Thhalv10010915m.g Eutrema salsugineum Thhalv10010915m.g I 0.740
PRUPE_ppa024805mg Prunus persica PRUPE_ppa024805mg N 0.737
Bra028550 Brassica rapa Bra028550 I 0.734
Pm026334 Prunus mume Pm026334 N 0.734
Bo6g067190 Brassica oleracea Bo6g067190 I 0.730
gene09683-v1.0-hybrid Fragaria vesca gene09683-v1.0-hybrid I 0.729
AtMYB27 Arabidopsis lyrata fgenesh2_kg.5__1687__AT3G53200.1 I 0.727
Bo8g082570 Brassica oleracea Bo8g082570 I 0.716
Bra006977 Brassica rapa Bra006977 I 0.716
GRMZM2G048136 Zea mays GRMZM2G048136 I 0.714
MYB27 Arabidopsis thaliana AT3G53200 D 0.708
BRADI4G04050 Brachypodium distachyon BRADI4G04050 I 0.707
orange1.1g044161m.g Citrus sinensis orange1.1g044161m.g I 0.705
GSMUA_Achr2G16200_001 Musa acuminata GSMUA_Achr2G16200_001 I 0.702
POPTR_0009s03240 Populus trichocarpa POPTR_0009s03240 I 0.701
SapurV1A.0040s0010 Salix purpurea SapurV1A.0040s0010 I 0.701
SapurV1A.0489s0220 Salix purpurea SapurV1A.0489s0220 I 0.701
cassava15759.m1 Manihot esculenta cassava15759.m1 N 0.700
MYBAS1 Oryza sativa OS11G0700500 I 0.697
ORGLA11G0187400 Oryza glaberrima ORGLA11G0187400 I 0.697
MLOC_78504 Hordeum vulgare MLOC_78504 I 0.697
ORUFI11G25190 Oryza rufipogon ORUFI11G25190 I 0.697
Si026803m.g Setaria italica Si026803m.g I 0.697
Pavir.Hb00058 Panicum virgatum Pavir.Hb00058 I 0.697
OB11G27690 Oryza brachyantha OB11G27690 I 0.697
F775_28589 Aegilops tauschii F775_28589 I 0.697
TRIUR3_16687 Triticum urartu TRIUR3_16687 I 0.697
BGIOSGA033532 Oryza indica BGIOSGA033532 I 0.697
Traes_4DS_0ECE7A421 Triticum aestivum Traes_4DS_0ECE7A421 I 0.697
Traes_4BS_61B30E3E4 Triticum aestivum Traes_4BS_61B30E3E4 I 0.697
ORGLA12G0141600 Oryza glaberrima ORGLA12G0141600 I 0.690
Pavir.Ca02588 Panicum virgatum Pavir.Ca02588 I 0.690
OB12G23080 Oryza brachyantha OB12G23080 I 0.690
Pavir.J11500 Panicum virgatum Pavir.J11500 I 0.690
ORGLA12G0206100 Oryza glaberrima ORGLA12G0206100 I 0.690
Traes_4AL_8B52D54FD Triticum aestivum Traes_4AL_8B52D54FD I 0.690
ORUFI12G17930 Oryza rufipogon ORUFI12G17930 I 0.690
Si023104m.g Setaria italica Si023104m.g I 0.690
MYBAS2 Oryza sativa OS12G0567300 I 0.690
Sb08g018580 Sorghum bicolor Sb08g018580 I 0.690
GRMZM2G130149 Zea mays GRMZM2G130149 I 0.690
GRMZM2G047626 Zea mays GRMZM2G047626 I 0.690
LPERR12G13390 Leersia perrieri LPERR12G13390 I 0.690
BGIOSGA035986 Oryza indica BGIOSGA035986 I 0.690
cassava24463.valid.m1 Manihot esculenta cassava24463.valid.m1 I 0.688
Pm009050 Prunus mume Pm009050 I 0.688
evm.TU.supercontig_59.23 Carica papaya evm.TU.supercontig_59.23 I 0.688
MTR_1g045610 Medicago truncatula MTR_1g045610 I 0.688
gene28293-v1.0-hybrid Fragaria vesca gene28293-v1.0-hybrid I 0.688
AMTR_s01267p00006490 Amborella trichopoda AMTR_s01267p00006490 I 0.687
Traes_3AL_A8AF980F3 Triticum aestivum Traes_3AL_A8AF980F3 I 0.686
TRIUR3_22432 Triticum urartu TRIUR3_22432 I 0.686
TRAES3BF065400010CFD_g Triticum aestivum TRAES3BF065400010CFD_g I 0.686
F775_29427 Aegilops tauschii F775_29427 I 0.686
GLYMA10G26681 Glycine max GLYMA10G26681 I 0.685
Gorai.005G054900 Gossypium raimondii Gorai.005G054900 I 0.685
PRUPE_ppa024234mg Prunus persica PRUPE_ppa024234mg I 0.685
Gorai.006G073500 Gossypium raimondii Gorai.006G073500 I 0.685
GLYMA20G20980 Glycine max GLYMA20G20980 I 0.685
GLYMA17G17560 Glycine max GLYMA17G17560 I 0.685
POPTR_0008s17350 Populus trichocarpa POPTR_0008s17350 I 0.685
Gorai.006G254200 Gossypium raimondii Gorai.006G254200 I 0.684
Gorai.013G265300 Gossypium raimondii Gorai.013G265300 I 0.684
PGSC0003DMG400001504 Solanum tuberosum PGSC0003DMG400001504 I 0.683
Lus10023711.g Linum usitatissimum Lus10023711.g I 0.683
orange1.1g047839m.g Citrus sinensis orange1.1g047839m.g I 0.683
Ciclev10006914m.g Citrus clementina Ciclev10006914m.g I 0.683
Solyc09g090790.2 Solanum lycopersicum Solyc09g090790.2 I 0.683
SapurV1A.0096s0360 Salix purpurea SapurV1A.0096s0360 I 0.682
POPTR_0010s07450 Populus trichocarpa POPTR_0010s07450 I 0.682
GSMUA_Achr9G28370_001 Musa acuminata GSMUA_Achr9G28370_001 I 0.681
MLOC_52439 Hordeum vulgare MLOC_52439 I 0.681
TRIUR3_16862 Triticum urartu TRIUR3_16862 I 0.681
F775_06315 Aegilops tauschii F775_06315 I 0.681
cassava13589.valid.m1 Manihot esculenta cassava13589.valid.m1 I 0.680
VIT_05s0049g02260 Vitis vinifera VIT_05s0049g02260 I 0.680
GSMUA_Achr8G02640_001 Musa acuminata GSMUA_Achr8G02640_001 I 0.680
29788.m000340 Ricinus communis 29788.m000340 I 0.680
GSMUA_Achr11G24690_001 Musa acuminata GSMUA_Achr11G24690_001 I 0.679
SapurV1A.0589s0170 Salix purpurea SapurV1A.0589s0170 I 0.679
Ca_07872 Cicer arietinum Ca_07872 I 0.679
MTR_1g073170 Medicago truncatula MTR_1g073170 I 0.678
GSMUA_Achr10G13520_001 Musa acuminata GSMUA_Achr10G13520_001 I 0.677
GSMUA_Achr7G18200_001 Musa acuminata GSMUA_Achr7G18200_001 I 0.677
GSMUA_Achr6G15370_001 Musa acuminata GSMUA_Achr6G15370_001 I 0.675
Lus10005886.g Linum usitatissimum Lus10005886.g I 0.674
MDP0000143156 Malus domestica MDP0000143156 I 0.674
Aquca_025_00059 Aquilegia coerulea Aquca_025_00059 I 0.673
GSMUA_Achr10G26730_001 Musa acuminata GSMUA_Achr10G26730_001 I 0.672
GSMUA_Achr5G28350_001 Musa acuminata GSMUA_Achr5G28350_001 I 0.672
Cucsa.213500 Cucumis sativus Cucsa.213500 I 0.672
Cla008413 Citrullus lanatus Cla008413 I 0.672
Cucsa.379880 Cucumis sativus Cucsa.379880 I 0.671
Cla013488 Citrullus lanatus Cla013488 I 0.671
AMTR_s00145p00098450 Amborella trichopoda AMTR_s00145p00098450 I 0.671
POPTR_0001s24220 Populus trichocarpa POPTR_0001s24220 I 0.671
GSMUA_Achr10G03710_001 Musa acuminata GSMUA_Achr10G03710_001 I 0.668
SapurV1A.0008s0950 Salix purpurea SapurV1A.0008s0950 I 0.668
SapurV1A.0008s0940 Salix purpurea SapurV1A.0008s0940 I 0.668
Gorai.003G136400 Gossypium raimondii Gorai.003G136400 I 0.668
orange1.1g023677m.g Citrus sinensis orange1.1g023677m.g I 0.668
MDP0000177010 Malus domestica MDP0000177010 I 0.668
VIT_06s0004g04140 Vitis vinifera VIT_06s0004g04140 I 0.668
Thhalv10002648m.g Eutrema salsugineum Thhalv10002648m.g I 0.668
Carubv10017875m.g Capsella rubella Carubv10017875m.g I 0.668
ATMYB48 Arabidopsis thaliana AT3G46130 I 0.668
Thhalv10014524m.g Eutrema salsugineum Thhalv10014524m.g I 0.668
TCM_041904 Theobroma cacao TCM_041904 I 0.668
Gorai.001G107900 Gossypium raimondii Gorai.001G107900 I 0.668
MYB59 Arabidopsis lyrata fgenesh2_kg.8__1928__AT5G59780.3 I 0.668
ATMYB48-1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5001097 I 0.668
PRUPE_ppa015954mg Prunus persica PRUPE_ppa015954mg I 0.668
MYB59 Arabidopsis thaliana AT5G59780 D 0.668
Pm000809 Prunus mume Pm000809 I 0.668
evm.TU.supercontig_190.35 Carica papaya evm.TU.supercontig_190.35 I 0.668
OBART01G45730 Oryza barthii OBART01G45730 I 0.667
BGIOSGA005283 Oryza indica BGIOSGA005283 I 0.667
Pavir.J08441 Panicum virgatum Pavir.J08441 I 0.667
ORUFI01G49220 Oryza rufipogon ORUFI01G49220 I 0.667
LPERR01G40120 Leersia perrieri LPERR01G40120 I 0.667
OB01G54920 Oryza brachyantha OB01G54920 I 0.667
OPUNC01G44650 Oryza punctata OPUNC01G44650 I 0.667
ORGLA01G0394700 Oryza glaberrima ORGLA01G0394700 I 0.667
MTR_4g063100 Medicago truncatula MTR_4g063100 I 0.666
GLYMA15G04620 Glycine max GLYMA15G04620 I 0.665
GLYMA13G40830 Glycine max GLYMA13G40830 I 0.665
Bra018223 Brassica rapa Bra018223 I 0.665
Bo3g130340 Brassica oleracea Bo3g130340 I 0.665
Eucgr.H02896 Eucalyptus grandis Eucgr.H02896 I 0.664
Pavir.J11826 Panicum virgatum Pavir.J11826 I 0.663
BRADI2G62510 Brachypodium distachyon BRADI2G62510 I 0.661