CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TCM_025077
(
Theobroma cacao
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
TCM_025077
T280560_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EOY09684
Myb
1634
1689
PDSWLPQEDAILCAVVHEYGPHWSLVSETLYSMTAGGFYRGRYRHPVHCCERYREL
EOY09685
Myb
1296
1351
PDSWLPQEDAILCAVVHEYGPHWSLVSETLYSMTAGGFYRGRYRHPVHCCERYREL
EOY09686
Myb
1180
1235
PDSWLPQEDAILCAVVHEYGPHWSLVSETLYSMTAGGFYRGRYRHPVHCCERYREL
EOY09687
Myb
1180
1235
PDSWLPQEDAILCAVVHEYGPHWSLVSETLYSMTAGGFYRGRYRHPVHCCERYREL
Links
Other
Myb/SANT
family TFs
Other
Theobroma cacao
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Lus10002974.g
Linum usitatissimum
Lus10002974.g
N
0.886
SapurV1A.0809s0030
Salix purpurea
SapurV1A.0809s0030
N
0.875
28842.m000937
Ricinus communis
28842.m000937
N
0.875
POPTR_0003s01670
Populus trichocarpa
POPTR_0003s01670
N
0.875
Gorai.004G264200
Gossypium raimondii
Gorai.004G264200
N
0.817
orange1.1g000138m.g
Citrus sinensis
orange1.1g000138m.g
N
0.802
Ciclev10010891m.g
Citrus clementina
Ciclev10010891m.g
N
0.802
MTR_1g053955
Medicago truncatula
MTR_1g053955
N
0.778
Cla017810
Citrullus lanatus
Cla017810
N
0.769
Lus10007173.g
Linum usitatissimum
Lus10007173.g
N
0.758
POPTR_0001s21490
Populus trichocarpa
POPTR_0001s21490
N
0.755
SapurV1A.0869s0150
Salix purpurea
SapurV1A.0869s0150
N
0.753
evm.TU.supercontig_34.20
Carica papaya
evm.TU.supercontig_34.20
N
0.753
Ca_14192
Cicer arietinum
Ca_14192
N
0.748
GLYMA09G17220
Glycine max
GLYMA09G17220
N
0.747