CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_1AL_01E24503F
(
Triticum aestivum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Traes_1AL_01E24503F
T280778_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
KUA1
M02312_2.00
Arabidopsis thaliana
NNTTATCCDN
NHGGATAANN
PBM
Weirauch et al.(2014)
pTH7647
0.682
0.795
KUA1
M07136_2.00
Arabidopsis thaliana
WWHHTTATCCAHWW
WWDTGGATAADDWW
Dap-seq
OMalley et al.(2016)
At5g47390_colamp_a
0.682
0.795
KUA1
M07137_2.00
Arabidopsis thaliana
HHWDYHTTATCCAHW
WDTGGATAADRHWDD
Dap-seq
OMalley et al.(2016)
At5g47390_col_b
0.682
0.795
PK00738.1
M02346_2.00
Cannabis sativa
NYWATCYDNN
NNHRGATWRN
PBM
Weirauch et al.(2014)
pTH9487
0.661
0.744
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_1AL_01E24503F.1
Myb
9
48
HTMFLEGLEKYGRGDWRNISRWSVKTRTPTQVASHAQKYF
Links
Other
Myb/SANT
family TFs
Other
Triticum aestivum
TFs
136 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy