Traes_1BL_C25B5DDB4 (Triticum aestivum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Traes_1BL_C25B5DDB4 T280822_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB3R5
M07116_2.00 		Arabidopsis thaliana
NWWWWNTDRCCGTTR
YAACGGYHANWWWWN		 Dap-seq
OMalley et al.(2016)
MYB3R5_col_a 		0.698 0.799
PK12011.1
M01279_2.00 		Cannabis sativa
HAACGGHHNN
NNDDCCGTTD		 PBM
Lambert et al.(2019)
pTH11423 		0.682 0.755
PC-MYB1
M07110_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R1_col_a 		0.678 0.719
PC-MYB1
M07111_2.00 		Arabidopsis thaliana
DWHNTDRCCGTTR
YAACGGYHANDWH		 Dap-seq
OMalley et al.(2016)
MYB3R1_colamp_a 		0.678 0.719
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_1BL_C25B5DDB4.2 Myb 17 63
Traes_1BL_C25B5DDB4.2 Myb 69 115
Traes_1BL_C25B5DDB4.2 Myb 121 165

Links

Other Myb/SANT family TFs
Other Triticum aestivum TFs

117 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_1DL_B26A733D4 Triticum aestivum Traes_1DL_B26A733D4 I 0.895
TRIUR3_29290 Triticum urartu TRIUR3_29290 I 0.891
Traes_1AL_51EBF8930 Triticum aestivum Traes_1AL_51EBF8930 N 0.805
ORUFI05G20390 Oryza rufipogon ORUFI05G20390 I 0.753
ONIVA05G20060 Oryza nivara ONIVA05G20060 I 0.753
OPUNC05G16800 Oryza punctata OPUNC05G16800 I 0.753
OBART05G19200 Oryza barthii OBART05G19200 I 0.753
BGIOSGA017917 Oryza indica BGIOSGA017917 I 0.753
OB01G45570 Oryza brachyantha OB01G45570 I 0.746
BRADI2G54640 Brachypodium distachyon BRADI2G54640 I 0.741
Eucgr.K03133 Eucalyptus grandis Eucgr.K03133 I 0.741
Pavir.Ea03349 Panicum virgatum Pavir.Ea03349 I 0.741
Sb03g039470 Sorghum bicolor Sb03g039470 I 0.736
MYB3R-2 Oryza sativa OS01G0841500 I 0.733
OGLUM01G40780 Oryza glumaepatula OGLUM01G40780 I 0.733
ORGLA01G0306500 Oryza glaberrima ORGLA01G0306500 I 0.733
ORGLA05G0166300 Oryza glaberrima ORGLA05G0166300 I 0.731
gene18416-v1.0-hybrid Fragaria vesca gene18416-v1.0-hybrid I 0.731
OS05G0459000 Oryza sativa OS05G0459000 I 0.731
Thhalv10020579m.g Eutrema salsugineum Thhalv10020579m.g I 0.731
Si000842m.g Setaria italica Si000842m.g I 0.730
Cla018173 Citrullus lanatus Cla018173 I 0.730
Pavir.Eb03676 Panicum virgatum Pavir.Eb03676 I 0.730
Lus10025351.g Linum usitatissimum Lus10025351.g I 0.729
Lus10024394.g Linum usitatissimum Lus10024394.g I 0.729
evm.TU.supercontig_228.17 Carica papaya evm.TU.supercontig_228.17 I 0.727
orange1.1g009402m.g Citrus sinensis orange1.1g009402m.g I 0.725
Ciclev10011452m.g Citrus clementina Ciclev10011452m.g I 0.725
Cucsa.175460 Cucumis sativus Cucsa.175460 I 0.724
GRMZM2G081919 Zea mays GRMZM2G081919 I 0.724
SapurV1A.0001s1810 Salix purpurea SapurV1A.0001s1810 I 0.721
Aquca_003_00045 Aquilegia coerulea Aquca_003_00045 I 0.720
VIT_08s0007g00360 Vitis vinifera VIT_08s0007g00360 I 0.719
POPTR_0006s08570 Populus trichocarpa POPTR_0006s08570 I 0.719
Gorai.006G172800 Gossypium raimondii Gorai.006G172800 I 0.718
MLOC_50701 Hordeum vulgare MLOC_50701 N 0.718
Bostr.6251s0040 Boechera stricta Bostr.6251s0040 I 0.716
Si021484m.g Setaria italica Si021484m.g I 0.716
Bo1g144510 Brassica oleracea Bo1g144510 I 0.714
Bra034067 Brassica rapa Bra034067 I 0.714
Pm002704 Prunus mume Pm002704 I 0.714
TCM_021936 Theobroma cacao TCM_021936 I 0.714
PRUPE_ppa003208mg Prunus persica PRUPE_ppa003208mg I 0.714
29846.m000184 Ricinus communis 29846.m000184 I 0.713
OB05G26770 Oryza brachyantha OB05G26770 N 0.709
Traes_3DL_6BBC889A1 Triticum aestivum Traes_3DL_6BBC889A1 I 0.708
TRAES3BF104600030CFD_g Triticum aestivum TRAES3BF104600030CFD_g I 0.708
Traes_3AL_386795528 Triticum aestivum Traes_3AL_386795528 I 0.708
GLYMA18G39740 Glycine max GLYMA18G39740 I 0.707
GLYMA07G15820 Glycine max GLYMA07G15820 I 0.707
MDP0000219581 Malus domestica MDP0000219581 I 0.703
Gorai.001G249400 Gossypium raimondii Gorai.001G249400 I 0.702
Solyc09g010820.2 Solanum lycopersicum Solyc09g010820.2 I 0.702
PGSC0003DMG400008908 Solanum tuberosum PGSC0003DMG400008908 I 0.702
GSMUA_Achr10G26610_001 Musa acuminata GSMUA_Achr10G26610_001 I 0.701
chr1.CM0147.520.nd Lotus japonicus chr1.CM0147.520.nd I 0.700
Thhalv10013211m.g Eutrema salsugineum Thhalv10013211m.g I 0.699
fgenesh1_pg.C_scaffold_3000839 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3000839 I 0.699
ATMYB3R5 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6000124 I 0.698
MYB3R5 Arabidopsis thaliana AT5G02320 D 0.698
Carubv10000643m.g Capsella rubella Carubv10000643m.g I 0.696
Cagra.0487s0012 Capsella grandiflora Cagra.0487s0012 I 0.696
LPERR01G31650 Leersia perrieri LPERR01G31650 I 0.695
mgf019610m Mimulus guttatus mgf019610m I 0.695
MDP0000295807 Malus domestica MDP0000295807 I 0.694
TRAES3BF049800070CFD_g Triticum aestivum TRAES3BF049800070CFD_g I 0.691
Traes_3AS_09025DA2E Triticum aestivum Traes_3AS_09025DA2E I 0.691
OBART01G08110 Oryza barthii OBART01G08110 I 0.689
ONIVA01G10670 Oryza nivara ONIVA01G10670 I 0.689
OGLUM01G09290 Oryza glumaepatula OGLUM01G09290 I 0.689
OLONG_011886 Oryza longistaminata OLONG_011886 I 0.689
GSMUA_Achr7G10520_001 Musa acuminata GSMUA_Achr7G10520_001 I 0.688
MTR_7g461410 Medicago truncatula MTR_7g461410 I 0.687
MTR_7g061330 Medicago truncatula MTR_7g061330 I 0.687
LPERR05G15070 Leersia perrieri LPERR05G15070 N 0.686
OPUNC01G08000 Oryza punctata OPUNC01G08000 I 0.685
OPUNC01G07980 Oryza punctata OPUNC01G07980 I 0.685
GLYMA03G19470 Glycine max GLYMA03G19470 I 0.684
Pavir.Ea00087 Panicum virgatum Pavir.Ea00087 I 0.683
Pavir.Eb00149 Panicum virgatum Pavir.Eb00149 I 0.683
PK12011.1 Cannabis sativa PK12011.1 D 0.682
OMERI01G08160 Oryza meridionalis OMERI01G08160 I 0.682
MYB3R-3 Arabidopsis thaliana AT3G09370 I 0.682
cassava12645.valid.m1 Manihot esculenta cassava12645.valid.m1 I 0.681
PRUPE_ppa000676mg Prunus persica PRUPE_ppa000676mg I 0.680
Ca_14925 Cicer arietinum Ca_14925 I 0.679
PC-MYB1 Arabidopsis thaliana AT4G32730 D 0.678
GLYMA04G08550 Glycine max GLYMA04G08550 I 0.678
GLYMA06G08660 Glycine max GLYMA06G08660 I 0.678
PC-MYB1 Arabidopsis lyrata fgenesh2_kg.7__866__AT4G32730.2 I 0.678
OS12G0238000 Oryza sativa OS12G0238000 I 0.677
Bostr.22252s0130 Boechera stricta Bostr.22252s0130 I 0.677
Bo3g171130 Brassica oleracea Bo3g171130 I 0.677
ORGLA12G0066300 Oryza glaberrima ORGLA12G0066300 I 0.677
Bra034531 Brassica rapa Bra034531 I 0.677
OB12G16480 Oryza brachyantha OB12G16480 I 0.677
Cagra.2515s0028 Capsella grandiflora Cagra.2515s0028 I 0.676
Carubv10013377m.g Capsella rubella Carubv10013377m.g I 0.676
MDP0000179225 Malus domestica MDP0000179225 I 0.674
Bra029762 Brassica rapa Bra029762 I 0.674
29794.m003447 Ricinus communis 29794.m003447 I 0.673
TRIUR3_24658 Triticum urartu TRIUR3_24658 I 0.673
F775_05724 Aegilops tauschii F775_05724 I 0.670
Bo5g139340 Brassica oleracea Bo5g139340 I 0.669
Solyc08g068320.2 Solanum lycopersicum Solyc08g068320.2 I 0.669
ORGLA01G0073200 Oryza glaberrima ORGLA01G0073200 I 0.669
GSMUA_Achr6G05030_001 Musa acuminata GSMUA_Achr6G05030_001 I 0.669
MTR_1g026870 Medicago truncatula MTR_1g026870 I 0.668
Bra009597 Brassica rapa Bra009597 I 0.668
OB01G18340 Oryza brachyantha OB01G18340 I 0.666
OLONG_011208 Oryza longistaminata OLONG_011208 I 0.666
Bo7g115810 Brassica oleracea Bo7g115810 I 0.666
Ca_01884 Cicer arietinum Ca_01884 I 0.665
Lus10022136.g Linum usitatissimum Lus10022136.g I 0.664
MTR_3g110028 Medicago truncatula MTR_3g110028 I 0.664
mgf008601m Mimulus guttatus mgf008601m I 0.663
Bostr.7867s1124 Boechera stricta Bostr.7867s1124 I 0.662