Traes_2DL_54E6F0446 (Triticum aestivum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Traes_2DL_54E6F0446 T280934_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AtMYB10
M07081_2.00
Arabidopsis thaliana
YYYACCWAMCHHHHNH

DNDDDDGKTWGGTRRR
Dap-seq
OMalley et al.(2016)
MYB10_col_a
0.743 0.742
AtMYB10
M07082_2.00
Arabidopsis thaliana
NYYYACCWAMCHHH

DDDGKTWGGTRRRN
Dap-seq
OMalley et al.(2016)
MYB10_colamp_a
0.743 0.742
MYB58
M07005_2.00
Arabidopsis thaliana
NNYYYACCWAMCHHH

DDDGKTWGGTRRRNN
Dap-seq
OMalley et al.(2016)
MYB58_col_a
0.729 0.763
MYB58
M07006_2.00
Arabidopsis thaliana
HNNYHYACCWAMCHHHNNNNH

DNNNNDDDGKTWGGTRDRNND
Dap-seq
OMalley et al.(2016)
MYB58_colamp_a
0.729 0.763
ATMYB13
M06999_2.00
Arabidopsis thaliana
HYCACCWACCHHHNH

DNDDDGGTWGGTGRD
Dap-seq
OMalley et al.(2016)
MYB13_col_a
0.697 0.753
ATMYB13
M07000_2.00
Arabidopsis thaliana
BYCACCWACCHHHNNHNN

NNDNNDDDGGTWGGTGRV
Dap-seq
OMalley et al.(2016)
MYB13_colamp_a
0.697 0.753
PK28187.1
M01286_2.00
Cannabis sativa
TACCTACC

GGTAGGTA
PBM
Lambert et al.(2019)
pTH11305
0.680 0.742
MYB15
M07084_2.00
Arabidopsis thaliana
NNNHNNHHNHHYCACCWAMYH

DRKTWGGTGRDDNDDNNDNNN
Dap-seq
OMalley et al.(2016)
ATY19_col_a
0.674 0.763
MYB15
M02699_2.00
Arabidopsis thaliana
CCACCTACCSBBG

CVVSGGTAGGTGG
SELEX
Mathelier et al.(2014)
MA0574.1
0.674 0.763
MYB15
M11041_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ATMYB15_01
0.674 0.763
MYB15
M11042_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ATMYB15_Q2
0.674 0.763
MYB107
M07061_2.00
Arabidopsis thaliana
NDDWDBBYYACCWAMYHH

DDRKTWGGTRRVVHWHHN
Dap-seq
OMalley et al.(2016)
MYB107_col_a
0.670 0.753
MYB107
M07062_2.00
Arabidopsis thaliana
WNBYYYACCWAMYH

DRKTWGGTRRRVNW
Dap-seq
OMalley et al.(2016)
MYB107_colamp_a
0.670 0.753
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_2DL_54E6F0446.1 Myb 16 63
Traes_2DL_54E6F0446.1 Myb 69 114

Links

Other Myb/SANT family TFs
Other Triticum aestivum TFs

514 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00048p00192390 Amborella trichopoda AMTR_s00048p00192390 I 0.000
AT2G06020 Arabidopsis thaliana AT2G06020 N 0.000
Bostr.24399s0035 Boechera stricta Bostr.24399s0035 N 0.000
Bra015134 Brassica rapa Bra015134 N 0.000
fgenesh1_pm.C_scaffold_3002359 Arabidopsis lyrata fgenesh1_pm.C_scaffold_3002359 N 0.000
Gorai.007G163400 Gossypium raimondii Gorai.007G163400 I 0.000
mgf004470m Mimulus guttatus mgf004470m I 0.000
SapurV1A.0051s0450 Salix purpurea SapurV1A.0051s0450 I 0.000
scaffold_303375.1 Arabidopsis lyrata scaffold_303375.1 N 0.000
Thhalv10002873m.g Eutrema salsugineum Thhalv10002873m.g N 0.000