CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TRAES3BF118300070CFD_g
(
Triticum aestivum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
TRAES3BF118300070CFD_g
T281036_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TRB1
M01070_2.00
Arabidopsis thaliana
WRMCCTAR
YTAGGKYW
PBM
Sullivan et al.(2014)
pTH7117
0.741
0.787
OS01G0708000
M02326_2.00
Oryza sativa
WRMCCTAVNN
NNBTAGGKYW
PBM
Weirauch et al.(2014)
pTH8716
0.734
0.766
AT1G72740
M07033_2.00
Arabidopsis thaliana
HMNAAACCCTAAWYY
RRWTTAGGGTTTNKD
Dap-seq
OMalley et al.(2016)
AT1G72740_col_a
0.683
0.723
AT1G72740
M07034_2.00
Arabidopsis thaliana
HNWAACCCTAAHYHNNNHNNN
NNNDNNNDRDTTAGGGTTWND
Dap-seq
OMalley et al.(2016)
AT1G72740_colamp_a
0.683
0.723
PK06103.1
M02348_2.00
Cannabis sativa
TGCCCTAG
CTAGGGCA
PBM
Weirauch et al.(2014)
pTH9649
0.670
0.809
TRB2
M02314_2.00
Arabidopsis thaliana
WRMCCTAR
YTAGGKYW
PBM
Weirauch et al.(2014)
pTH7094
0.668
0.809
TRB2
M01083_2.00
Arabidopsis thaliana
HRMCCTAR
YTAGGKYD
PBM
Sullivan et al.(2014)
pTH7260
0.668
0.809
TRB2
M07157_2.00
Arabidopsis thaliana
HHHHHNWWRCCCTAAWHHN
NDDWTTAGGGYWWNDDDDD
Dap-seq
OMalley et al.(2016)
TBP3_col_a
0.668
0.809
TRB2
M07158_2.00
Arabidopsis thaliana
HVDHHHNWARCCCTAAHYH
DRDTTAGGGYTWNDDDHBD
Dap-seq
OMalley et al.(2016)
TBP3_colamp_a
0.668
0.809
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TRAES3BF118300070CFD_t1
Myb
5
57
KQRWTSEEEAALKAGVAKHGPGKWRTILRDTDFSAVLRLRSNVDLKDKWRNLS
Links
Other
Myb/SANT
family TFs
Other
Triticum aestivum
TFs
146 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TRIUR3_08672
Triticum urartu
TRIUR3_08672
I
0.909
Traes_3AL_CF481F6AC
Triticum aestivum
Traes_3AL_CF481F6AC
I
0.909
BRADI2G42240
Brachypodium distachyon
BRADI2G42240
I
0.899
Si002403m.g
Setaria italica
Si002403m.g
I
0.865
GRMZM2G136887
Zea mays
GRMZM2G136887
I
0.865
Sb03g026470
Sorghum bicolor
Sb03g026470
I
0.865
Pavir.J27218
Panicum virgatum
Pavir.J27218
I
0.865
GRMZM2G087817
Zea mays
GRMZM2G087817
I
0.865
Pavir.Ea02064
Panicum virgatum
Pavir.Ea02064
I
0.865
AMTR_s00007p00193000
Amborella trichopoda
AMTR_s00007p00193000
I
0.787
Solyc01g106940.2
Solanum lycopersicum
Solyc01g106940.2
I
0.779
Bo5g077530
Brassica oleracea
Bo5g077530
I
0.775
Bra039650
Brassica rapa
Bra039650
I
0.775
PGSC0003DMG400023131
Solanum tuberosum
PGSC0003DMG400023131
I
0.772
Solyc11g044320.1
Solanum lycopersicum
Solyc11g044320.1
I
0.772
Cla012798
Citrullus lanatus
Cla012798
I
0.771
Cucsa.341020
Cucumis sativus
Cucsa.341020
I
0.771
evm.TU.supercontig_25.81
Carica papaya
evm.TU.supercontig_25.81
I
0.762
mgf009594m
Mimulus guttatus
mgf009594m
I
0.759
SELMODRAFT_49296
Selaginella moellendorffii
SELMODRAFT_49296
I
0.749
SELMODRAFT_49297
Selaginella moellendorffii
SELMODRAFT_49297
I
0.749
PGSC0003DMG401025742
Solanum tuberosum
PGSC0003DMG401025742
I
0.748
GSMUA_Achr2G13040_001
Musa acuminata
GSMUA_Achr2G13040_001
I
0.748
Bostr.7128s0363
Boechera stricta
Bostr.7128s0363
I
0.744
Thhalv10008387m.g
Eutrema salsugineum
Thhalv10008387m.g
I
0.744
TRB1
Arabidopsis thaliana
AT1G49950
D
0.741
Carubv10009836m.g
Capsella rubella
Carubv10009836m.g
I
0.741
Cagra.2826s0004
Capsella grandiflora
Cagra.2826s0004
I
0.741
Bra018818
Brassica rapa
Bra018818
I
0.741
Bo6g018740
Brassica oleracea
Bo6g018740
I
0.741
TRB1
Arabidopsis lyrata
fgenesh2_kg.1__4077__AT1G49950.2
I
0.741
Bostr.26675s0174
Boechera stricta
Bostr.26675s0174
I
0.741
Thhalv10011686m.g
Eutrema salsugineum
Thhalv10011686m.g
I
0.741
ORUFI01G23880
Oryza rufipogon
ORUFI01G23880
I
0.736
OBART01G21150
Oryza barthii
OBART01G21150
I
0.736
OMERI01G19490
Oryza meridionalis
OMERI01G19490
I
0.736
ONIVA01G23780
Oryza nivara
ONIVA01G23780
I
0.736
OMERI01G19510
Oryza meridionalis
OMERI01G19510
I
0.736
OB01G30760
Oryza brachyantha
OB01G30760
I
0.736
OLONG_011068
Oryza longistaminata
OLONG_011068
I
0.736
ORGLA01G0168300
Oryza glaberrima
ORGLA01G0168300
I
0.736
evm.TU.supercontig_106.31
Carica papaya
evm.TU.supercontig_106.31
I
0.736
TCM_029078
Theobroma cacao
TCM_029078
I
0.736
29706.m001328
Ricinus communis
29706.m001328
I
0.736
cassava34930.m1
Manihot esculenta
cassava34930.m1
I
0.736
OPUNC01G21220
Oryza punctata
OPUNC01G21220
I
0.736
BGIOSGA003871
Oryza indica
BGIOSGA003871
I
0.736
OS01G0589300
Oryza sativa
OS01G0589300
I
0.736
LPERR01G18090
Leersia perrieri
LPERR01G18090
I
0.736
ORGLA01G0233700
Oryza glaberrima
ORGLA01G0233700
I
0.734
OPUNC01G28080
Oryza punctata
OPUNC01G28080
I
0.734
ORUFI01G31370
Oryza rufipogon
ORUFI01G31370
I
0.734
OS01G0708000
Oryza sativa
OS01G0708000
D
0.734
OB01G37330
Oryza brachyantha
OB01G37330
I
0.734
BGIOSGA004300
Oryza indica
BGIOSGA004300
I
0.734
ONIVA01G32190
Oryza nivara
ONIVA01G32190
I
0.734
OBART01G28260
Oryza barthii
OBART01G28260
I
0.734
OGLUM01G32190
Oryza glumaepatula
OGLUM01G32190
I
0.734
OMERI05G07460
Oryza meridionalis
OMERI05G07460
I
0.734
OLONG_008666
Oryza longistaminata
OLONG_008666
I
0.734
EuGene.1300010252
Ostreococcus RCC809
EuGene.1300010252
I
0.732
gw1.176.27.1
Physcomitrella patens
gw1.176.27.1
I
0.732
gw1.1.287.1
Physcomitrella patens
gw1.1.287.1
I
0.732
Ca_08043
Cicer arietinum
Ca_08043
I
0.732
EuGene.0000030935
Micromonas pusilla
EuGene.0000030935
I
0.731
Bostr.10273s0077
Boechera stricta
Bostr.10273s0077
I
0.723
Bo5g023860
Brassica oleracea
Bo5g023860
I
0.716
Bra025967
Brassica rapa
Bra025967
I
0.716
OSTLU_27049
Ostreococcus lucimarinus
OSTLU_27049
I
0.714
mgf004823m
Mimulus guttatus
mgf004823m
I
0.711
MTR_0095s0040
Medicago truncatula
MTR_0095s0040
I
0.710
SapurV1A.0235s0100
Salix purpurea
SapurV1A.0235s0100
I
0.709
SapurV1A.1368s0050
Salix purpurea
SapurV1A.1368s0050
I
0.709
POPTR_0014s01010
Populus trichocarpa
POPTR_0014s01010
I
0.709
Lus10025203.g
Linum usitatissimum
Lus10025203.g
I
0.707
Lus10012092.g
Linum usitatissimum
Lus10012092.g
I
0.707
Cagra.0824s0121
Capsella grandiflora
Cagra.0824s0121
I
0.705
Ciclev10026245m.g
Citrus clementina
Ciclev10026245m.g
I
0.705
orange1.1g023740m.g
Citrus sinensis
orange1.1g023740m.g
I
0.705
Bo8g067280
Brassica oleracea
Bo8g067280
I
0.705
AT1G17520
Arabidopsis thaliana
AT1G17520
I
0.705
Bra016598
Brassica rapa
Bra016598
I
0.705
Carubv10009890m.g
Capsella rubella
Carubv10009890m.g
I
0.705
scaffold_101953.1
Arabidopsis lyrata
scaffold_101953.1
I
0.705
Aquca_004_00181
Aquilegia coerulea
Aquca_004_00181
I
0.704
Cucsa.298390
Cucumis sativus
Cucsa.298390
I
0.704
Cla006547
Citrullus lanatus
Cla006547
I
0.704
VIT_00s1311g00020
Vitis vinifera
VIT_00s1311g00020
I
0.704
VIT_07s0151g00480
Vitis vinifera
VIT_07s0151g00480
I
0.704
POPTR_0007s14920
Populus trichocarpa
POPTR_0007s14920
I
0.704
MTR_5g015340
Medicago truncatula
MTR_5g015340
I
0.698
GLYMA07G00930
Glycine max
GLYMA07G00930
I
0.697
gene25445-v1.0-hybrid
Fragaria vesca
gene25445-v1.0-hybrid
I
0.697
GLYMA08G20270
Glycine max
GLYMA08G20270
I
0.697
Bo8g104830
Brassica oleracea
Bo8g104830
I
0.695
GSMUA_Achr7G01090_001
Musa acuminata
GSMUA_Achr7G01090_001
I
0.690
MTR_8g494240
Medicago truncatula
MTR_8g494240
I
0.690
Solyc02g064630.2
Solanum lycopersicum
Solyc02g064630.2
I
0.687
PGSC0003DMG402003328
Solanum tuberosum
PGSC0003DMG402003328
I
0.687
MDP0000234807
Malus domestica
MDP0000234807
I
0.686
Carubv10020636m.g
Capsella rubella
Carubv10020636m.g
I
0.683
Cagra.1013s0027
Capsella grandiflora
Cagra.1013s0027
I
0.683
AT1G72740
Arabidopsis thaliana
AT1G72740
D
0.683
fgenesh2_kg.2__1540__AT1G72740.1
Arabidopsis lyrata
fgenesh2_kg.2__1540__AT1G72740.1
I
0.683
GSMUA_Achr6G31260_001
Musa acuminata
GSMUA_Achr6G31260_001
I
0.679
GLYMA09G03390
Glycine max
GLYMA09G03390
I
0.679
GLYMA15G14320
Glycine max
GLYMA15G14320
I
0.679
MTR_2g031870
Medicago truncatula
MTR_2g031870
I
0.679
Bra029978
Brassica rapa
Bra029978
I
0.675
Gorai.009G143000
Gossypium raimondii
Gorai.009G143000
I
0.675
Bo1g081300
Brassica oleracea
Bo1g081300
I
0.675
GSMUA_Achr6G30000_001
Musa acuminata
GSMUA_Achr6G30000_001
I
0.673
Gorai.005G230800
Gossypium raimondii
Gorai.005G230800
I
0.670
PDK_20s1467521g002
Phoenix dactylifera
PDK_20s1467521g002
I
0.670
PK06103.1
Cannabis sativa
PK06103.1
D
0.670
SapurV1A.0005s0260
Salix purpurea
SapurV1A.0005s0260
I
0.670
SapurV1A.0019s0460
Salix purpurea
SapurV1A.0019s0460
I
0.670
orange1.1g022048m.g
Citrus sinensis
orange1.1g022048m.g
I
0.670
MDP0000239354
Malus domestica
MDP0000239354
I
0.670
PK19870.1
Cannabis sativa
PK19870.1
I
0.670
Lus10033775.g
Linum usitatissimum
Lus10033775.g
I
0.670
Lus10014653.g
Linum usitatissimum
Lus10014653.g
I
0.670
SELMODRAFT_413266
Selaginella moellendorffii
SELMODRAFT_413266
I
0.670
gene05764-v1.0-hybrid
Fragaria vesca
gene05764-v1.0-hybrid
I
0.670
TRB1
Vitis vinifera
VIT_03s0091g01030
I
0.670
Pm002374
Prunus mume
Pm002374
I
0.670
SELMODRAFT_426759
Selaginella moellendorffii
SELMODRAFT_426759
I
0.670
PRUPE_ppa009220mg
Prunus persica
PRUPE_ppa009220mg
I
0.670
POPTR_0001s30000
Populus trichocarpa
POPTR_0001s30000
I
0.670
POPTR_0009s09020
Populus trichocarpa
POPTR_0009s09020
I
0.670
29661.m000926
Ricinus communis
29661.m000926
I
0.670
TCM_007242
Theobroma cacao
TCM_007242
I
0.670
Ciclev10028926m.g
Citrus clementina
Ciclev10028926m.g
I
0.670
29812.m000204
Ricinus communis
29812.m000204
I
0.670
Aquca_060_00026
Aquilegia coerulea
Aquca_060_00026
I
0.670
Eucgr.I01053
Eucalyptus grandis
Eucgr.I01053
I
0.670
cassava7508.valid.m1
Manihot esculenta
cassava7508.valid.m1
I
0.670
TRB2
Arabidopsis thaliana
AT5G67580
D
0.668
TRB2
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_8002157
I
0.668
Bra030992
Brassica rapa
Bra030992
I
0.667
MTR_1g041765
Medicago truncatula
MTR_1g041765
I
0.666
mgf010975m
Mimulus guttatus
mgf010975m
I
0.665
mgf000125m
Mimulus guttatus
mgf000125m
I
0.665
PDK_20s1413011g001
Phoenix dactylifera
PDK_20s1413011g001
I
0.664
Bra016037
Brassica rapa
Bra016037
I
0.663
Bo6g116150
Brassica oleracea
Bo6g116150
I
0.663