Traes_3DS_A0676BAEA (Triticum aestivum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Traes_3DS_A0676BAEA T281059_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB108
M07065_2.00
Arabidopsis thaliana
RCCWAAYYNNNNHNH

DNDNNNNRRTTWGGY
Dap-seq
OMalley et al.(2016)
BOS1_col_a
0.771 0.839
MYB62
M07027_2.00
Arabidopsis thaliana
NHRCCTAAYTWNHNN

NNDNWARTTAGGYDN
Dap-seq
OMalley et al.(2016)
MYB62_col_a
0.767 0.796
MYB62
M07028_2.00
Arabidopsis thaliana
HNKRCCTAACTHH

DDAGTTAGGYMND
Dap-seq
OMalley et al.(2016)
MYB62_colamp_a
0.767 0.796
MYB116
M07014_2.00
Arabidopsis thaliana
NRCCTAAYTWNWNNN

NNNWNWARTTAGGYN
Dap-seq
OMalley et al.(2016)
MYB116_col_a
0.712 0.742
MYB116
M07015_2.00
Arabidopsis thaliana
HNTRCCTAACTHH

DDAGTTAGGYAND
Dap-seq
OMalley et al.(2016)
MYB116_colamp_a
0.712 0.742
Q2TCH0_PETHY
M11072_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PH4_01
0.681 0.645
MYB05_ANTMA
M11067_2.00
Antirrhinum majus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MYB305_Q3
0.670 0.785
ATMYB121
M07091_2.00
Arabidopsis thaliana
NYNWACCTAMYHHH

DDDRKTAGGTWNRN
Dap-seq
OMalley et al.(2016)
MYB121_col_a
0.667 0.677
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_3DS_A0676BAEA.1 Myb 16 63
Traes_3DS_A0676BAEA.1 Myb 69 114

Links

Other Myb/SANT family TFs
Other Triticum aestivum TFs

583 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BRADI2G37795 Brachypodium distachyon BRADI2G37795 N 0.000
Pavir.Cb01092 Panicum virgatum Pavir.Cb01092 N 0.000
Pavir.Db01105 Panicum virgatum Pavir.Db01105 N 0.000
Pavir.Ea01242 Panicum virgatum Pavir.Ea01242 N 0.000
Pavir.Ga01170 Panicum virgatum Pavir.Ga01170 N 0.000
Pavir.Ia02192 Panicum virgatum Pavir.Ia02192 N 0.000
Pavir.J01563 Panicum virgatum Pavir.J01563 N 0.000
Pavir.J07161 Panicum virgatum Pavir.J07161 N 0.000
Pavir.J32630 Panicum virgatum Pavir.J32630 N 0.000
Pavir.J35278 Panicum virgatum Pavir.J35278 N 0.000
Sb03g047180 Sorghum bicolor Sb03g047180 N 0.000
Sb01g016055 Sorghum bicolor Sb01g016055 N 0.000
Sb01g017605 Sorghum bicolor Sb01g017605 N 0.000
Sb02g005850 Sorghum bicolor Sb02g005850 N 0.000
Sb02g005860 Sorghum bicolor Sb02g005860 N 0.000
Sb02g007217 Sorghum bicolor Sb02g007217 N 0.000
Sb02g027384 Sorghum bicolor Sb02g027384 N 0.000
Sb02g028930 Sorghum bicolor Sb02g028930 N 0.000
Sb03g011600 Sorghum bicolor Sb03g011600 N 0.000
Sb03g031563 Sorghum bicolor Sb03g031563 N 0.000
Sb08g002650 Sorghum bicolor Sb08g002650 N 0.000
Sb05g007130 Sorghum bicolor Sb05g007130 N 0.000
Traes_5DS_E9D675FAC Triticum aestivum Traes_5DS_E9D675FAC N 0.000
Traes_5DL_FC7D15A05 Triticum aestivum Traes_5DL_FC7D15A05 N 0.000
Traes_5BL_FC8AB1380 Triticum aestivum Traes_5BL_FC8AB1380 N 0.000
Traes_2DL_F37E51175 Triticum aestivum Traes_2DL_F37E51175 N 0.000