CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_5BS_2CB91C54A
(
Triticum aestivum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Traes_5BS_2CB91C54A
T281173_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB46
M00877_2.00
Arabidopsis thaliana
NAMCNDHHN
NDDHNGKTN
PBM
Franco-Zorrilla et al.(2014)
MYB46
0.766
0.871
MYB46
M11046_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ATMYB46_Q6
0.766
0.871
MYB83
M01073_2.00
Arabidopsis thaliana
YACCHACC
GGTDGGTR
PBM
Sullivan et al.(2014)
pTH7140
0.765
0.839
MYB83
M07066_2.00
Arabidopsis thaliana
YCACCAACHNH
DNDGTTGGTGR
Dap-seq
OMalley et al.(2016)
MYB83_col_a
0.765
0.839
MYB83
M07067_2.00
Arabidopsis thaliana
NCACCWAMCDNHNNN
NNNDNHGKTWGGTGN
Dap-seq
OMalley et al.(2016)
MYB83_colamp_a
0.765
0.839
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_5BS_2CB91C54A.1
Myb
32
79
KGLWSPEEDERLVAYMLRSGQGSWSDVARNAGLQRCGKSCRLRWINYL
Traes_5BS_2CB91C54A.1
Myb
85
130
RGAFSPQEEDLIVNLHAILGNRWSQIAARLPGRTDNEIKNFWNSTI
Links
Other
Myb/SANT
family TFs
Other
Triticum aestivum
TFs
211 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MLOC_66577
Hordeum vulgare
MLOC_66577
I
0.909
F775_06561
Aegilops tauschii
F775_06561
I
0.909
Traes_5DS_AACA2EBA3
Triticum aestivum
Traes_5DS_AACA2EBA3
I
0.909
TRIUR3_33254
Triticum urartu
TRIUR3_33254
I
0.909
BRADI4G06317
Brachypodium distachyon
BRADI4G06317
I
0.903
Sb08g016620
Sorghum bicolor
Sb08g016620
I
0.900
GRMZM2G052606
Zea mays
GRMZM2G052606
I
0.900
OBART12G13720
Oryza barthii
OBART12G13720
I
0.884
OGLUM12G15400
Oryza glumaepatula
OGLUM12G15400
I
0.884
OPUNC12G12380
Oryza punctata
OPUNC12G12380
I
0.884
Si024786m.g
Setaria italica
Si024786m.g
I
0.884
ORGLA12G0120900
Oryza glaberrima
ORGLA12G0120900
I
0.884
ONIVA05G29400
Oryza nivara
ONIVA05G29400
I
0.884
OMERI12G09660
Oryza meridionalis
OMERI12G09660
I
0.884
ORUFI12G15040
Oryza rufipogon
ORUFI12G15040
I
0.884
BGIOSGA036092
Oryza indica
BGIOSGA036092
I
0.884
Pavir.Ca02370
Panicum virgatum
Pavir.Ca02370
I
0.875
GLYMA12G36630
Glycine max
GLYMA12G36630
I
0.821
GSMUA_AchrUn_randomG21080_001
Musa acuminata
GSMUA_AchrUn_randomG21080_001
I
0.817
GLYMA13G27310
Glycine max
GLYMA13G27310
I
0.809
Solyc01g087130.2
Solanum lycopersicum
Solyc01g087130.2
I
0.807
PK14287.1
Cannabis sativa
PK14287.1
I
0.803
TCM_005885
Theobroma cacao
TCM_005885
I
0.792
OB12G21380
Oryza brachyantha
OB12G21380
I
0.791
AMTR_s00022p00252530
Amborella trichopoda
AMTR_s00022p00252530
I
0.790
Gorai.004G037300
Gossypium raimondii
Gorai.004G037300
I
0.790
GSMUA_Achr8G31350_001
Musa acuminata
GSMUA_Achr8G31350_001
I
0.788
Gorai.001G138800
Gossypium raimondii
Gorai.001G138800
I
0.786
Gorai.013G251100
Gossypium raimondii
Gorai.013G251100
I
0.786
Bo3g061630
Brassica oleracea
Bo3g061630
I
0.784
Eucgr.G03385
Eucalyptus grandis
Eucgr.G03385
I
0.784
mgf024753m
Mimulus guttatus
mgf024753m
I
0.782
evm.TU.supercontig_84.59
Carica papaya
evm.TU.supercontig_84.59
I
0.782
Bra006166
Brassica rapa
Bra006166
I
0.782
Eucgr.B03684
Eucalyptus grandis
Eucgr.B03684
I
0.782
Bo3g008870
Brassica oleracea
Bo3g008870
I
0.782
GLYMA13G07020
Glycine max
GLYMA13G07020
I
0.781
SapurV1A.0027s0350
Salix purpurea
SapurV1A.0027s0350
I
0.781
POPTR_0001s27430
Populus trichocarpa
POPTR_0001s27430
I
0.781
POPTR_0009s06630
Populus trichocarpa
POPTR_0009s06630
I
0.781
cassava32908.m1
Manihot esculenta
cassava32908.m1
I
0.778
PGSC0003DMG400006868
Solanum tuberosum
PGSC0003DMG400006868
I
0.777
orange1.1g019619m.g
Citrus sinensis
orange1.1g019619m.g
I
0.772
Ciclev10033941m.g
Citrus clementina
Ciclev10033941m.g
I
0.772
Bra001284
Brassica rapa
Bra001284
I
0.768
evm.TU.supercontig_640.1
Carica papaya
evm.TU.supercontig_640.1
I
0.767
Carubv10001573m.g
Capsella rubella
Carubv10001573m.g
I
0.766
Bra008875
Brassica rapa
Bra008875
I
0.766
ATMYB46
Arabidopsis lyrata
scaffold_601291.1
I
0.766
Bo9g169270
Brassica oleracea
Bo9g169270
I
0.766
Cagra.1535s0018
Capsella grandiflora
Cagra.1535s0018
I
0.766
MYB46
Arabidopsis thaliana
AT5G12870
D
0.766
Bostr.2902s0023
Boechera stricta
Bostr.2902s0023
I
0.766
MYB83
Arabidopsis thaliana
AT3G08500
D
0.765
Cagra.2991s0041
Capsella grandiflora
Cagra.2991s0041
I
0.765
Carubv10014093m.g
Capsella rubella
Carubv10014093m.g
I
0.765
Thhalv10021052m.g
Eutrema salsugineum
Thhalv10021052m.g
I
0.765
Bra029696
Brassica rapa
Bra029696
I
0.765
Bo5g139830
Brassica oleracea
Bo5g139830
I
0.765
MYB83
Arabidopsis lyrata
fgenesh2_kg.3__848__AT3G08500.1
I
0.765
cassava39861.m1
Manihot esculenta
cassava39861.m1
I
0.764
MYB83
Vitis vinifera
VIT_13s0064g00960
I
0.763
MTR_3g028740
Medicago truncatula
MTR_3g028740
I
0.763
Bostr.22252s0219
Boechera stricta
Bostr.22252s0219
I
0.761
GSMUA_Achr2G07780_001
Musa acuminata
GSMUA_Achr2G07780_001
I
0.760
Pm016295
Prunus mume
Pm016295
I
0.760
Gorai.004G172700
Gossypium raimondii
Gorai.004G172700
I
0.760
PRUPE_ppa016923mg
Prunus persica
PRUPE_ppa016923mg
I
0.760
PDK_20s1844641g001
Phoenix dactylifera
PDK_20s1844641g001
I
0.758
Thhalv10015560m.g
Eutrema salsugineum
Thhalv10015560m.g
I
0.757
Solyc11g065840.1
Solanum lycopersicum
Solyc11g065840.1
I
0.757
PGSC0003DMG400007360
Solanum tuberosum
PGSC0003DMG400007360
I
0.757
MDP0000736994
Malus domestica
MDP0000736994
I
0.757
Bo2g010970
Brassica oleracea
Bo2g010970
I
0.757
GLYMA19G05080
Glycine max
GLYMA19G05080
I
0.757
Lus10027369.g
Linum usitatissimum
Lus10027369.g
I
0.755
Lus10031281.g
Linum usitatissimum
Lus10031281.g
I
0.754
Cla008683
Citrullus lanatus
Cla008683
I
0.752
VIT_06s0004g02110
Vitis vinifera
VIT_06s0004g02110
I
0.752
Aquca_014_00829
Aquilegia coerulea
Aquca_014_00829
I
0.752
PRUPE_ppa009566mg
Prunus persica
PRUPE_ppa009566mg
I
0.752
MDP0000204495
Malus domestica
MDP0000204495
I
0.752
Ciclev10017658m.g
Citrus clementina
Ciclev10017658m.g
I
0.752
Cucsa.065530
Cucumis sativus
Cucsa.065530
I
0.752
cassava30676.valid.m1
Manihot esculenta
cassava30676.valid.m1
I
0.752
MDP0000722954
Malus domestica
MDP0000722954
I
0.752
orange1.1g021164m.g
Citrus sinensis
orange1.1g021164m.g
I
0.752
Cucsa.195180
Cucumis sativus
Cucsa.195180
I
0.750
Cla017541
Citrullus lanatus
Cla017541
I
0.750
Lus10002559.g
Linum usitatissimum
Lus10002559.g
I
0.748
MTR_2g097910
Medicago truncatula
MTR_2g097910
I
0.747
gene14666-v1.0-hybrid
Fragaria vesca
gene14666-v1.0-hybrid
I
0.744
gene27001-v1.0-hybrid
Fragaria vesca
gene27001-v1.0-hybrid
I
0.744
Gorai.006G129100
Gossypium raimondii
Gorai.006G129100
I
0.744
cassava5203.m1
Manihot esculenta
cassava5203.m1
I
0.743
PK13930.1
Cannabis sativa
PK13930.1
I
0.742
TCM_040694
Theobroma cacao
TCM_040694
I
0.738
MTR_4g065017
Medicago truncatula
MTR_4g065017
I
0.737
GLYMA12G06180
Glycine max
GLYMA12G06180
I
0.735
Lus10029520.g
Linum usitatissimum
Lus10029520.g
I
0.734
Lus10039610.g
Linum usitatissimum
Lus10039610.g
I
0.734
GLYMA15G03920
Glycine max
GLYMA15G03920
I
0.731
GLYMA13G41470
Glycine max
GLYMA13G41470
I
0.731
GLYMA11G14200
Glycine max
GLYMA11G14200
I
0.728
SapurV1A.0534s0230
Salix purpurea
SapurV1A.0534s0230
I
0.728
POPTR_0009s05860
Populus trichocarpa
POPTR_0009s05860
I
0.728
Carubv10020714m.g
Capsella rubella
Carubv10020714m.g
I
0.725
Cagra.10702s0006
Capsella grandiflora
Cagra.10702s0006
I
0.725
Lus10031850.g
Linum usitatissimum
Lus10031850.g
I
0.721
Cucsa.127860
Cucumis sativus
Cucsa.127860
I
0.718
POPTR_0001s26590
Populus trichocarpa
POPTR_0001s26590
I
0.713
SapurV1A.0925s0070
Salix purpurea
SapurV1A.0925s0070
I
0.713
LjSGA_026563.1
Lotus japonicus
LjSGA_026563.1
I
0.712
Pm012272
Prunus mume
Pm012272
I
0.703
GRMZM2G119693
Zea mays
GRMZM2G119693
I
0.702
chr3.CM0049.330.nc
Lotus japonicus
chr3.CM0049.330.nc
I
0.696
Pavir.Ca00231
Panicum virgatum
Pavir.Ca00231
I
0.692
cassava24925.valid.m1
Manihot esculenta
cassava24925.valid.m1
I
0.690
mgf019381m
Mimulus guttatus
mgf019381m
I
0.687
Carubv10001224m.g
Capsella rubella
Carubv10001224m.g
I
0.683
Cagra.23492s0001
Capsella grandiflora
Cagra.23492s0001
I
0.683
Bra036588
Brassica rapa
Bra036588
I
0.683
Bo2g156300
Brassica oleracea
Bo2g156300
I
0.683
Bo7g095130
Brassica oleracea
Bo7g095130
I
0.683
Bostr.29827s0161
Boechera stricta
Bostr.29827s0161
I
0.683
MYB86
Arabidopsis thaliana
AT5G26660
I
0.683
ATMYB86
Arabidopsis lyrata
fgenesh2_kg.6__2630__AT5G26660.1
I
0.683
Ca_07460
Cicer arietinum
Ca_07460
I
0.683
Bo9g010860
Brassica oleracea
Bo9g010860
I
0.683
Thhalv10004450m.g
Eutrema salsugineum
Thhalv10004450m.g
I
0.683
GLYMA15G41810
Glycine max
GLYMA15G41810
I
0.680
Carubv10024801m.g
Capsella rubella
Carubv10024801m.g
I
0.680
Si022730m.g
Setaria italica
Si022730m.g
I
0.679
OB05G32030
Oryza brachyantha
OB05G32030
I
0.679
GRMZM2G175232
Zea mays
GRMZM2G175232
I
0.679
Thhalv10006126m.g
Eutrema salsugineum
Thhalv10006126m.g
I
0.678
F775_01821
Aegilops tauschii
F775_01821
I
0.677
TRAES3BF071400020CFD_g
Triticum aestivum
TRAES3BF071400020CFD_g
I
0.677
MLOC_6156
Hordeum vulgare
MLOC_6156
I
0.677
TRIUR3_27020
Triticum urartu
TRIUR3_27020
I
0.677
OB07G24240
Oryza brachyantha
OB07G24240
I
0.677
Pavir.J19191
Panicum virgatum
Pavir.J19191
I
0.676
Sb09g027200
Sorghum bicolor
Sb09g027200
I
0.676
Pavir.Ca01788
Panicum virgatum
Pavir.Ca01788
I
0.676
Thhalv10023601m.g
Eutrema salsugineum
Thhalv10023601m.g
I
0.676
Ciclev10021268m.g
Citrus clementina
Ciclev10021268m.g
I
0.675
orange1.1g021486m.g
Citrus sinensis
orange1.1g021486m.g
I
0.675
BRADI2G17982
Brachypodium distachyon
BRADI2G17982
I
0.674
GRMZM2G064744
Zea mays
GRMZM2G064744
I
0.673
BRADI2G40620
Brachypodium distachyon
BRADI2G40620
I
0.673
Bo5g009920
Brassica oleracea
Bo5g009920
I
0.672
MTR_8g017390
Medicago truncatula
MTR_8g017390
I
0.671
Pavir.J18139
Panicum virgatum
Pavir.J18139
I
0.670
Pavir.J20716
Panicum virgatum
Pavir.J20716
I
0.670
Traes_7DL_5BD0D4BD1
Triticum aestivum
Traes_7DL_5BD0D4BD1
I
0.670
ORGLA05G0210500
Oryza glaberrima
ORGLA05G0210500
I
0.670
OS05G0543600
Oryza sativa
OS05G0543600
I
0.670
Traes_7AL_04D939077
Triticum aestivum
Traes_7AL_04D939077
I
0.670
OMERI05G21780
Oryza meridionalis
OMERI05G21780
I
0.670
MLOC_16981
Hordeum vulgare
MLOC_16981
I
0.670
BGIOSGA020297
Oryza indica
BGIOSGA020297
I
0.670
BRADI3G17165
Brachypodium distachyon
BRADI3G17165
I
0.670
F775_28951
Aegilops tauschii
F775_28951
I
0.670
TRIUR3_24104
Triticum urartu
TRIUR3_24104
I
0.670
Sb03g024500
Sorghum bicolor
Sb03g024500
I
0.670
Bra014446
Brassica rapa
Bra014446
I
0.669
Bra003443
Brassica rapa
Bra003443
I
0.669
POPTR_0012s08600
Populus trichocarpa
POPTR_0012s08600
I
0.668
Eucgr.B00229
Eucalyptus grandis
Eucgr.B00229
I
0.668
cassava44907.m1
Manihot esculenta
cassava44907.m1
I
0.667
GSMUA_Achr10G08070_001
Musa acuminata
GSMUA_Achr10G08070_001
I
0.667
evm.TU.supercontig_6.280
Carica papaya
evm.TU.supercontig_6.280
I
0.667
PDK_20s1854611g001
Phoenix dactylifera
PDK_20s1854611g001
I
0.667
Eucgr.D02271
Eucalyptus grandis
Eucgr.D02271
I
0.666
PRUPE_ppa018561mg
Prunus persica
PRUPE_ppa018561mg
I
0.665
SapurV1A.0011s0520
Salix purpurea
SapurV1A.0011s0520
I
0.665
GLYMA04G36110
Glycine max
GLYMA04G36110
I
0.665
GLYMA05G02550
Glycine max
GLYMA05G02550
I
0.665
MDP0000256645
Malus domestica
MDP0000256645
I
0.665
GLYMA06G18830
Glycine max
GLYMA06G18830
I
0.665
evm.TU.supercontig_110.11
Carica papaya
evm.TU.supercontig_110.11
I
0.665
TCM_012174
Theobroma cacao
TCM_012174
I
0.665
VIT_05s0020g01100
Vitis vinifera
VIT_05s0020g01100
I
0.665
Pm024326
Prunus mume
Pm024326
I
0.665
30147.m013885
Ricinus communis
30147.m013885
I
0.665
gene09845-v1.0-hybrid
Fragaria vesca
gene09845-v1.0-hybrid
I
0.665
cassava33965.m1
Manihot esculenta
cassava33965.m1
I
0.665
Cucsa.098700
Cucumis sativus
Cucsa.098700
I
0.665
Cla003497
Citrullus lanatus
Cla003497
I
0.665
Traes_1AL_343F2D219
Triticum aestivum
Traes_1AL_343F2D219
I
0.664
Traes_1AL_C7FD90C13
Triticum aestivum
Traes_1AL_C7FD90C13
I
0.664
Cla012793
Citrullus lanatus
Cla012793
I
0.664
TRIUR3_16876
Triticum urartu
TRIUR3_16876
I
0.664
Cucsa.340960
Cucumis sativus
Cucsa.340960
I
0.664
Bra020016
Brassica rapa
Bra020016
I
0.664
Thhalv10028778m.g
Eutrema salsugineum
Thhalv10028778m.g
I
0.663
Bostr.30057s0004
Boechera stricta
Bostr.30057s0004
I
0.663
AtMYB50
Arabidopsis thaliana
AT1G57560
I
0.663
Bra020526
Brassica rapa
Bra020526
I
0.663
Bostr.13158s0261
Boechera stricta
Bostr.13158s0261
I
0.663
POPTR_0015s09430
Populus trichocarpa
POPTR_0015s09430
I
0.663
AtMYB50
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_1003728
I
0.663
Pavir.J00444
Panicum virgatum
Pavir.J00444
I
0.662
Eucgr.K02806
Eucalyptus grandis
Eucgr.K02806
I
0.661
Ciclev10024338m.g
Citrus clementina
Ciclev10024338m.g
I
0.661
Bo8g095790
Brassica oleracea
Bo8g095790
I
0.661
Bra007588
Brassica rapa
Bra007588
I
0.661
OPUNC01G19230
Oryza punctata
OPUNC01G19230
I
0.661
cassava19716.m1
Manihot esculenta
cassava19716.m1
I
0.661
orange1.1g016021m.g
Citrus sinensis
orange1.1g016021m.g
I
0.661
TRIUR3_16874
Triticum urartu
TRIUR3_16874
I
0.661