CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_7DS_8DF2537B8
(
Triticum aestivum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Traes_7DS_8DF2537B8
T281373_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Gam1
M02703_2.00
Hordeum vulgare
NVYAACSGMC
GKCSGTTRBN
SELEX
Mathelier et al.(2014)
MA0034.1
0.680
0.803
Gam1
M11061_2.00
Hordeum vulgare
YAACSRHM
KDYSGTTR
Transfac
Matys et al.(2006)
P$GAMYB_01
0.680
0.803
GAM1_ORYSI
M11055_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GAMYB_Q2
0.663
0.789
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_7DS_8DF2537B8.1
Myb
1
32
RQHGEGNWNAVQRITGLLRCGKSCRLRWTNHL
Traes_7DS_8DF2537B8.1
Myb
38
82
KGAFSPDEELLVAQLHAQLGNKWARMATHLPGRTDNEIKNYWNTR
Links
Other
Myb/SANT
family TFs
Other
Triticum aestivum
TFs
64 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA08G43000
Glycine max
GLYMA08G43000
I
0.827
TRIUR3_20797
Triticum urartu
TRIUR3_20797
I
0.791
F775_23034
Aegilops tauschii
F775_23034
I
0.791
MLOC_6041
Hordeum vulgare
MLOC_6041
I
0.787
GSMUA_Achr7G00280_001
Musa acuminata
GSMUA_Achr7G00280_001
I
0.776
OPUNC03G22220
Oryza punctata
OPUNC03G22220
I
0.767
OLONG_025057
Oryza longistaminata
OLONG_025057
I
0.758
OGLUM03G24880
Oryza glumaepatula
OGLUM03G24880
I
0.758
OBART03G24120
Oryza barthii
OBART03G24120
I
0.758
ONIVA04G15310
Oryza nivara
ONIVA04G15310
I
0.758
ORGLA03G0224700
Oryza glaberrima
ORGLA03G0224700
I
0.758
OS03G0578900
Oryza sativa
OS03G0578900
I
0.758
ORUFI03G24730
Oryza rufipogon
ORUFI03G24730
I
0.758
OB03G32840
Oryza brachyantha
OB03G32840
I
0.758
OMERI03G21920
Oryza meridionalis
OMERI03G21920
I
0.758
Pm011812
Prunus mume
Pm011812
I
0.744
LjSGA_057622.2
Lotus japonicus
LjSGA_057622.2
I
0.739
LPERR03G20110
Leersia perrieri
LPERR03G20110
I
0.738
BGIOSGA013008
Oryza indica
BGIOSGA013008
N
0.730
GRMZM2G070523
Zea mays
GRMZM2G070523
I
0.728
AC217264.3_FG005
Zea mays
AC217264.3_FG005
I
0.728
Sb01g015920
Sorghum bicolor
Sb01g015920
I
0.728
Si039629m.g
Setaria italica
Si039629m.g
I
0.728
Pavir.Ib03827
Panicum virgatum
Pavir.Ib03827
I
0.719
LjT02G13.10.nc
Lotus japonicus
LjT02G13.10.nc
I
0.705
PK15478.1
Cannabis sativa
PK15478.1
I
0.699
GLYMA08G42955
Glycine max
GLYMA08G42955
I
0.697
GLYMA08G42920
Glycine max
GLYMA08G42920
I
0.695
Ca_20081
Cicer arietinum
Ca_20081
I
0.688
MTR_3g052430
Medicago truncatula
MTR_3g052430
I
0.684
GSMUA_Achr4G23690_001
Musa acuminata
GSMUA_Achr4G23690_001
I
0.684
GLYMA18G10921
Glycine max
GLYMA18G10921
I
0.681
GRMZM2G139688
Zea mays
GRMZM2G139688
I
0.680
TRAES3BF027700010CFD_g
Triticum aestivum
TRAES3BF027700010CFD_g
I
0.680
Pavir.Eb03517
Panicum virgatum
Pavir.Eb03517
I
0.680
TRIUR3_27104
Triticum urartu
TRIUR3_27104
I
0.680
BRADI2G53010
Brachypodium distachyon
BRADI2G53010
I
0.680
Gam1
Hordeum vulgare
Q96464_HORVU
D
0.680
F775_28392
Aegilops tauschii
F775_28392
I
0.680
Pavir.Ea03206
Panicum virgatum
Pavir.Ea03206
I
0.680
orange1.1g046419m.g
Citrus sinensis
orange1.1g046419m.g
I
0.680
Ciclev10010620m.g
Citrus clementina
Ciclev10010620m.g
I
0.680
GSMUA_Achr1G17150_001
Musa acuminata
GSMUA_Achr1G17150_001
I
0.680
Pm016605
Prunus mume
Pm016605
I
0.676
PRUPE_ppa003628mg
Prunus persica
PRUPE_ppa003628mg
I
0.676
gene00431-v1.0-hybrid
Fragaria vesca
gene00431-v1.0-hybrid
I
0.676
MDP0000147309
Malus domestica
MDP0000147309
I
0.676
cassava40302.m1
Manihot esculenta
cassava40302.m1
I
0.675
evm.TU.supercontig_12.292
Carica papaya
evm.TU.supercontig_12.292
I
0.673
Si000907m.g
Setaria italica
Si000907m.g
I
0.671
chr3.CM0005.370.nc
Lotus japonicus
chr3.CM0005.370.nc
I
0.670
mgf002965m
Mimulus guttatus
mgf002965m
I
0.667
GLYMA13G25716
Glycine max
GLYMA13G25716
I
0.666
SapurV1A.0537s0200
Salix purpurea
SapurV1A.0537s0200
I
0.664
GAMYB
Oryza sativa
OS01G0812000
I
0.663
OGLUM01G20920
Oryza glumaepatula
OGLUM01G20920
I
0.663
OBART01G34660
Oryza barthii
OBART01G34660
I
0.663
OB01G43550
Oryza brachyantha
OB01G43550
I
0.663
OLONG_020610
Oryza longistaminata
OLONG_020610
I
0.663
OMERI01G31990
Oryza meridionalis
OMERI01G31990
I
0.663
GAM1
Oryza indica
BGIOSGA004670
I
0.663
GAM1_ORYSI
Oryza sativa
GAM1_ORYSI
D
0.663
Lus10026787.g
Linum usitatissimum
Lus10026787.g
I
0.662
Lus10036103.g
Linum usitatissimum
Lus10036103.g
I
0.662