Traes_7DS_8DF2537B8 (Triticum aestivum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Traes_7DS_8DF2537B8 T281373_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Gam1
M02703_2.00
Hordeum vulgare
NVYAACSGMC

GKCSGTTRBN
SELEX
Mathelier et al.(2014)
MA0034.1
0.680 0.803
Gam1
M11061_2.00
Hordeum vulgare
YAACSRHM

KDYSGTTR
Transfac
Matys et al.(2006)
P$GAMYB_01
0.680 0.803
GAM1_ORYSI
M11055_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GAMYB_Q2
0.663 0.789
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_7DS_8DF2537B8.1 Myb 1 32
Traes_7DS_8DF2537B8.1 Myb 38 82

Links

Other Myb/SANT family TFs
Other Triticum aestivum TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Gam1 Hordeum vulgare Q96464_HORVU D 0.680
GAM1_ORYSI Oryza sativa GAM1_ORYSI D 0.663
LjT02G13.10.nc Lotus japonicus LjT02G13.10.nc I 0.705
Pm016605 Prunus mume Pm016605 I 0.676
Pm011812 Prunus mume Pm011812 I 0.744
Ca_20081 Cicer arietinum Ca_20081 I 0.688
TRIUR3_27104 Triticum urartu TRIUR3_27104 I 0.680
TRIUR3_20797 Triticum urartu TRIUR3_20797 I 0.791
TRAES3BF027700010CFD_g Triticum aestivum TRAES3BF027700010CFD_g I 0.680
Si039629m.g Setaria italica Si039629m.g I 0.728
Si000907m.g Setaria italica Si000907m.g I 0.671
Sb01g015920 Sorghum bicolor Sb01g015920 I 0.728
PRUPE_ppa003628mg Prunus persica PRUPE_ppa003628mg I 0.676
OS03G0578900 Oryza sativa OS03G0578900 I 0.758
GAMYB Oryza sativa OS01G0812000 I 0.663
cassava40302.m1 Manihot esculenta cassava40302.m1 I 0.675
mgf002965m Mimulus guttatus mgf002965m I 0.667
Ciclev10010620m.g Citrus clementina Ciclev10010620m.g I 0.680
LjSGA_057622.2 Lotus japonicus LjSGA_057622.2 I 0.739
chr3.CM0005.370.nc Lotus japonicus chr3.CM0005.370.nc I 0.670
PK15478.1 Cannabis sativa PK15478.1 I 0.699
SapurV1A.0537s0200 Salix purpurea SapurV1A.0537s0200 I 0.664
Pavir.Ib03827 Panicum virgatum Pavir.Ib03827 I 0.719
Pavir.Eb03517 Panicum virgatum Pavir.Eb03517 I 0.680
Pavir.Ea03206 Panicum virgatum Pavir.Ea03206 I 0.680
orange1.1g046419m.g Citrus sinensis orange1.1g046419m.g I 0.680
MDP0000147309 Malus domestica MDP0000147309 I 0.676
Lus10036103.g Linum usitatissimum Lus10036103.g I 0.662
Lus10026787.g Linum usitatissimum Lus10026787.g I 0.662
gene00431-v1.0-hybrid Fragaria vesca gene00431-v1.0-hybrid I 0.676
evm.TU.supercontig_12.292 Carica papaya evm.TU.supercontig_12.292 I 0.673
ORUFI03G24730 Oryza rufipogon ORUFI03G24730 I 0.758
ORGLA03G0224700 Oryza glaberrima ORGLA03G0224700 I 0.758
OPUNC03G22220 Oryza punctata OPUNC03G22220 I 0.767
GSMUA_Achr4G23690_001 Musa acuminata GSMUA_Achr4G23690_001 I 0.684
GSMUA_Achr1G17150_001 Musa acuminata GSMUA_Achr1G17150_001 I 0.680
GRMZM2G139688 Zea mays GRMZM2G139688 I 0.680
GRMZM2G070523 Zea mays GRMZM2G070523 I 0.728
GLYMA18G10921 Glycine max GLYMA18G10921 I 0.681
GLYMA13G25716 Glycine max GLYMA13G25716 I 0.666
GLYMA08G43000 Glycine max GLYMA08G43000 I 0.827
GLYMA08G42955 Glycine max GLYMA08G42955 I 0.697
GLYMA08G42920 Glycine max GLYMA08G42920 I 0.695
F775_28392 Aegilops tauschii F775_28392 I 0.680
F775_23034 Aegilops tauschii F775_23034 I 0.791
BRADI2G53010 Brachypodium distachyon BRADI2G53010 I 0.680
GAM1 Oryza indica BGIOSGA004670 I 0.663
GSMUA_Achr7G00280_001 Musa acuminata GSMUA_Achr7G00280_001 I 0.776
LPERR03G20110 Leersia perrieri LPERR03G20110 I 0.738
ONIVA04G15310 Oryza nivara ONIVA04G15310 I 0.758
OMERI03G21920 Oryza meridionalis OMERI03G21920 I 0.758
OMERI01G31990 Oryza meridionalis OMERI01G31990 I 0.663
OLONG_025057 Oryza longistaminata OLONG_025057 I 0.758
OLONG_020610 Oryza longistaminata OLONG_020610 I 0.663
OGLUM03G24880 Oryza glumaepatula OGLUM03G24880 I 0.758
OGLUM01G20920 Oryza glumaepatula OGLUM01G20920 I 0.663
OBART03G24120 Oryza barthii OBART03G24120 I 0.758
OBART01G34660 Oryza barthii OBART01G34660 I 0.663
OB03G32840 Oryza brachyantha OB03G32840 I 0.758
OB01G43550 Oryza brachyantha OB01G43550 I 0.663
MTR_3g052430 Medicago truncatula MTR_3g052430 I 0.684
MLOC_6041 Hordeum vulgare MLOC_6041 I 0.787
AC217264.3_FG005 Zea mays AC217264.3_FG005 I 0.728
BGIOSGA013008 Oryza indica BGIOSGA013008 N 0.730