VIT_04s0008g00620 (Vitis vinifera)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 VIT_04s0008g00620 T281914_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAX3
M02700_2.00 		Arabidopsis thaliana
SCACCTACCHCCN
NGGDGGTAGGTGS		 SELEX
Mathelier et al.(2014)
MA0576.1 		0.668 0.731
RAX3
M11043_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB84_01 		0.668 0.731
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_04s0008g00620.t01 Myb 14 62
VIT_04s0008g00620.t01 Myb 68 113

Links

Other Myb/SANT family TFs
Other Vitis vinifera TFs

242 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
orange1.1g045583m.g Citrus sinensis orange1.1g045583m.g I 0.797
Ciclev10010621m.g Citrus clementina Ciclev10010621m.g I 0.797
GLYMA17G35020 Glycine max GLYMA17G35020 I 0.793
TCM_037245 Theobroma cacao TCM_037245 I 0.786
cassava16944.m1 Manihot esculenta cassava16944.m1 I 0.783
POPTR_0006s25060 Populus trichocarpa POPTR_0006s25060 I 0.782
Gorai.001G024300 Gossypium raimondii Gorai.001G024300 I 0.767
MTR_1g017000 Medicago truncatula MTR_1g017000 I 0.766
GLYMA14G10483 Glycine max GLYMA14G10483 I 0.763
Pavir.J11789 Panicum virgatum Pavir.J11789 I 0.763
SapurV1A.0890s0050 Salix purpurea SapurV1A.0890s0050 I 0.752
SapurV1A.3377s0010 Salix purpurea SapurV1A.3377s0010 I 0.752
PRUPE_ppa019554mg Prunus persica PRUPE_ppa019554mg I 0.752
BRADI2G17280 Brachypodium distachyon BRADI2G17280 N 0.749
Cucsa.395300 Cucumis sativus Cucsa.395300 N 0.744
OS05G0553400 Oryza sativa OS05G0553400 I 0.742
BGIOSGA017601 Oryza indica BGIOSGA017601 I 0.742
ORGLA05G0216200 Oryza glaberrima ORGLA05G0216200 I 0.742
ORUFI05G26880 Oryza rufipogon ORUFI05G26880 I 0.742
Si022874m.g Setaria italica Si022874m.g I 0.739
Pavir.J15551 Panicum virgatum Pavir.J15551 I 0.739
Sb09g027800 Sorghum bicolor Sb09g027800 I 0.739
Eucgr.C03699 Eucalyptus grandis Eucgr.C03699 I 0.735
Eucgr.C00624 Eucalyptus grandis Eucgr.C00624 I 0.732
LPERR05G20870 Leersia perrieri LPERR05G20870 I 0.725
mgf002711m Mimulus guttatus mgf002711m I 0.725
MTR_4g128670 Medicago truncatula MTR_4g128670 I 0.723
Bo8g078940 Brassica oleracea Bo8g078940 I 0.723
PK14382.1 Cannabis sativa PK14382.1 I 0.723
Traes_1AL_F0688BFDE Triticum aestivum Traes_1AL_F0688BFDE I 0.722
GRMZM2G069325 Zea mays GRMZM2G069325 I 0.722
GLYMA01G00805 Glycine max GLYMA01G00805 I 0.718
TRAES3BF058700130CFD_g Triticum aestivum TRAES3BF058700130CFD_g I 0.714
BRADI2G46770 Brachypodium distachyon BRADI2G46770 I 0.714
MLOC_71129 Hordeum vulgare MLOC_71129 I 0.714
Si002629m.g Setaria italica Si002629m.g N 0.713
Pavir.Eb00254 Panicum virgatum Pavir.Eb00254 N 0.713
Pavir.Ea00256 Panicum virgatum Pavir.Ea00256 N 0.713
GLYMA07G15250 Glycine max GLYMA07G15250 I 0.709
Aquca_001_00195 Aquilegia coerulea Aquca_001_00195 I 0.708
gene02652-v1.0-hybrid Fragaria vesca gene02652-v1.0-hybrid I 0.708
Sb03g003120 Sorghum bicolor Sb03g003120 N 0.707
GRMZM2G001875 Zea mays GRMZM2G001875 N 0.707
PRUPE_ppa026975mg Prunus persica PRUPE_ppa026975mg I 0.706
Traes_7AL_5B57EF9FC Triticum aestivum Traes_7AL_5B57EF9FC I 0.706
Bra017963 Brassica rapa Bra017963 I 0.704
Cucsa.288590 Cucumis sativus Cucsa.288590 I 0.704
cassava11642.m1 Manihot esculenta cassava11642.m1 I 0.704
AMTR_s00056p00204920 Amborella trichopoda AMTR_s00056p00204920 I 0.703
PGSC0003DMG400000349 Solanum tuberosum PGSC0003DMG400000349 I 0.699
MDP0000785820 Malus domestica MDP0000785820 I 0.699
MDP0000836365 Malus domestica MDP0000836365 I 0.699
Lus10001316.g Linum usitatissimum Lus10001316.g I 0.698
Lus10006978.g Linum usitatissimum Lus10006978.g I 0.698
MDP0000322479 Malus domestica MDP0000322479 I 0.698
Thhalv10010576m.g Eutrema salsugineum Thhalv10010576m.g I 0.698
Pavir.J34453 Panicum virgatum Pavir.J34453 I 0.697
PGSC0003DMG400008532 Solanum tuberosum PGSC0003DMG400008532 I 0.697
GRMZM2G006352 Zea mays GRMZM2G006352 I 0.697
Solyc03g059200.1 Solanum lycopersicum Solyc03g059200.1 I 0.697
Si002350m.g Setaria italica Si002350m.g I 0.697
GSMUA_Achr5G09280_001 Musa acuminata GSMUA_Achr5G09280_001 I 0.695
Gorai.001G010000 Gossypium raimondii Gorai.001G010000 I 0.694
LPERR01G22970 Leersia perrieri LPERR01G22970 I 0.694
OB01G36020 Oryza brachyantha OB01G36020 I 0.694
GSMUA_Achr4G01050_001 Musa acuminata GSMUA_Achr4G01050_001 I 0.693
PK02305.1 Cannabis sativa PK02305.1 I 0.693
GLYMA17G07330 Glycine max GLYMA17G07330 I 0.693
Ca_03266 Cicer arietinum Ca_03266 I 0.693
gene27379-v1.0-hybrid Fragaria vesca gene27379-v1.0-hybrid I 0.693
Solyc07g006750.2 Solanum lycopersicum Solyc07g006750.2 I 0.693
Eucgr.C00190 Eucalyptus grandis Eucgr.C00190 I 0.693
PRUPE_ppa022431mg Prunus persica PRUPE_ppa022431mg I 0.693
PGSC0003DMG400018750 Solanum tuberosum PGSC0003DMG400018750 I 0.693
Gorai.010G079900 Gossypium raimondii Gorai.010G079900 I 0.691
BRADI1G07260 Brachypodium distachyon BRADI1G07260 I 0.690
OPUNC03G32690 Oryza punctata OPUNC03G32690 I 0.690
PK26008.1 Cannabis sativa PK26008.1 I 0.689
SapurV1A.0818s0020 Salix purpurea SapurV1A.0818s0020 I 0.689
Traes_7DL_20EC9096A Triticum aestivum Traes_7DL_20EC9096A I 0.689
MLOC_44167 Hordeum vulgare MLOC_44167 I 0.689
TRIUR3_21241 Triticum urartu TRIUR3_21241 I 0.686
GSMUA_Achr1G04910_001 Musa acuminata GSMUA_Achr1G04910_001 I 0.685
GSMUA_Achr6G31740_001 Musa acuminata GSMUA_Achr6G31740_001 I 0.684
GSMUA_Achr6G30830_001 Musa acuminata GSMUA_Achr6G30830_001 I 0.684
Pm002200 Prunus mume Pm002200 I 0.684
Solyc12g008670.1 Solanum lycopersicum Solyc12g008670.1 I 0.683
OB05G32650 Oryza brachyantha OB05G32650 I 0.682
PGSC0003DMG400004948 Solanum tuberosum PGSC0003DMG400004948 I 0.682
Pavir.Aa03183 Panicum virgatum Pavir.Aa03183 I 0.682
Solyc04g077260.2 Solanum lycopersicum Solyc04g077260.2 I 0.682
BGIOSGA004221 Oryza indica BGIOSGA004221 I 0.680
ORUFI01G29860 Oryza rufipogon ORUFI01G29860 I 0.680
ORGLA01G0219900 Oryza glaberrima ORGLA01G0219900 I 0.680
OGLUM01G30780 Oryza glumaepatula OGLUM01G30780 I 0.680
OBART01G26850 Oryza barthii OBART01G26850 I 0.680
chr2.CM0021.150.nc Lotus japonicus chr2.CM0021.150.nc I 0.679
MDP0000262514 Malus domestica MDP0000262514 I 0.679
MDP0000124992 Malus domestica MDP0000124992 I 0.679
POPTR_0006s18620 Populus trichocarpa POPTR_0006s18620 I 0.679
MDP0000786507 Malus domestica MDP0000786507 I 0.679
Traes_5DL_1521D205A Triticum aestivum Traes_5DL_1521D205A I 0.678
Traes_5BL_A848F629F Triticum aestivum Traes_5BL_A848F629F I 0.678
Traes_5AL_8008803A5 Triticum aestivum Traes_5AL_8008803A5 I 0.678
MLOC_52896 Hordeum vulgare MLOC_52896 I 0.678
F775_08680 Aegilops tauschii F775_08680 I 0.678
MDP0000851495 Malus domestica MDP0000851495 I 0.677
TCM_034634 Theobroma cacao TCM_034634 I 0.677
GSMUA_Achr9G09790_001 Musa acuminata GSMUA_Achr9G09790_001 I 0.677
mgf012871m Mimulus guttatus mgf012871m I 0.675
BRADI4G38965 Brachypodium distachyon BRADI4G38965 I 0.675
GSMUA_Achr4G25260_001 Musa acuminata GSMUA_Achr4G25260_001 I 0.675
GSMUA_Achr5G10690_001 Musa acuminata GSMUA_Achr5G10690_001 I 0.675
Bra031847 Brassica rapa Bra031847 I 0.674
Bra024419 Brassica rapa Bra024419 I 0.674
Sb06g003100 Sorghum bicolor Sb06g003100 I 0.674
Traes_2DS_3F5D36630 Triticum aestivum Traes_2DS_3F5D36630 I 0.674
Pavir.Ga02684 Panicum virgatum Pavir.Ga02684 I 0.674
Pavir.J31349 Panicum virgatum Pavir.J31349 I 0.674
Traes_2BS_2A12B5E70 Triticum aestivum Traes_2BS_2A12B5E70 I 0.674
GRMZM2G011422 Zea mays GRMZM2G011422 I 0.674
Bostr.0568s0206 Boechera stricta Bostr.0568s0206 I 0.674
Cagra.0917s0007 Capsella grandiflora Cagra.0917s0007 I 0.674
Carubv10027655m.g Capsella rubella Carubv10027655m.g I 0.674
ATMYB68 Arabidopsis lyrata fgenesh2_kg.8__2632__AT5G65790.1 I 0.674
TRIUR3_02925 Triticum urartu TRIUR3_02925 I 0.674
Thhalv10005299m.g Eutrema salsugineum Thhalv10005299m.g I 0.674
Bo2g168190 Brassica oleracea Bo2g168190 I 0.674
Si036681m.g Setaria italica Si036681m.g I 0.674
ATMYB68 Arabidopsis thaliana AT5G65790 I 0.674
Traes_2AS_CD74215DB Triticum aestivum Traes_2AS_CD74215DB I 0.674
Bo3g097710 Brassica oleracea Bo3g097710 I 0.674
Bo9g018910 Brassica oleracea Bo9g018910 I 0.674
MLOC_5849 Hordeum vulgare MLOC_5849 I 0.674
Si010627m.g Setaria italica Si010627m.g I 0.674
GLYMA17G16980 Glycine max GLYMA17G16980 I 0.673
Pavir.Bb02272 Panicum virgatum Pavir.Bb02272 I 0.673
Sb02g025350 Sorghum bicolor Sb02g025350 I 0.673
Si030282m.g Setaria italica Si030282m.g I 0.673
GLYMA01G40411 Glycine max GLYMA01G40411 I 0.672
Aquca_001_00247 Aquilegia coerulea Aquca_001_00247 I 0.672
Gorai.008G086400 Gossypium raimondii Gorai.008G086400 I 0.672
Gorai.009G006700 Gossypium raimondii Gorai.009G006700 I 0.672
TCM_038898 Theobroma cacao TCM_038898 I 0.672
Bra017218 Brassica rapa Bra017218 I 0.671
Bo4g186460 Brassica oleracea Bo4g186460 I 0.671
GSMUA_Achr8G24780_001 Musa acuminata GSMUA_Achr8G24780_001 I 0.671
VIT_11s0016g02780 Vitis vinifera VIT_11s0016g02780 I 0.671
gene02643-v1.0-hybrid Fragaria vesca gene02643-v1.0-hybrid I 0.670
mgf021409m Mimulus guttatus mgf021409m I 0.670
PRUPE_ppa024417mg Prunus persica PRUPE_ppa024417mg I 0.670
mgf011646m Mimulus guttatus mgf011646m I 0.670
Lus10005834.g Linum usitatissimum Lus10005834.g N 0.669
Lus10039462.g Linum usitatissimum Lus10039462.g N 0.669
F775_07686 Aegilops tauschii F775_07686 I 0.669
evm.TU.supercontig_129.59 Carica papaya evm.TU.supercontig_129.59 I 0.668
gene05581-v1.0-hybrid Fragaria vesca gene05581-v1.0-hybrid I 0.668
evm.TU.supercontig_95.69 Carica papaya evm.TU.supercontig_95.69 I 0.668
GSMUA_Achr6G01850_001 Musa acuminata GSMUA_Achr6G01850_001 I 0.668
GSMUA_Achr5G22760_001 Musa acuminata GSMUA_Achr5G22760_001 I 0.668
orange1.1g017727m.g Citrus sinensis orange1.1g017727m.g I 0.668
SapurV1A.0004s0360 Salix purpurea SapurV1A.0004s0360 I 0.668
GLYMA0041S00310 Glycine max GLYMA0041S00310 I 0.668
orange1.1g036344m.g Citrus sinensis orange1.1g036344m.g I 0.668
SapurV1A.0608s0210 Salix purpurea SapurV1A.0608s0210 I 0.668
RAX3 Arabidopsis thaliana AT3G49690 D 0.668
LjSGA_044047.1 Lotus japonicus LjSGA_044047.1 I 0.668
LjSGA_033877.1 Lotus japonicus LjSGA_033877.1 I 0.668
Eucgr.F02207 Eucalyptus grandis Eucgr.F02207 I 0.668
GLYMA04G05170 Glycine max GLYMA04G05170 I 0.668
Lus10028248.g Linum usitatissimum Lus10028248.g I 0.668
Lus10007248.g Linum usitatissimum Lus10007248.g I 0.668
Gorai.010G028800 Gossypium raimondii Gorai.010G028800 I 0.668
MDP0000266156 Malus domestica MDP0000266156 N 0.668
GLYMA13G01200 Glycine max GLYMA13G01200 I 0.668
MDP0000809452 Malus domestica MDP0000809452 I 0.668
GLYMA11G04880 Glycine max GLYMA11G04880 I 0.668
Gorai.009G222900 Gossypium raimondii Gorai.009G222900 I 0.668
Ciclev10027178m.g Citrus clementina Ciclev10027178m.g I 0.668
VIT_00s1352g00010 Vitis vinifera VIT_00s1352g00010 I 0.668
MYB36 Vitis vinifera VIT_11s0052g01490 I 0.668
Cla019089 Citrullus lanatus Cla019089 I 0.668
Cucsa.395340 Cucumis sativus Cucsa.395340 I 0.668
Cucsa.103470 Cucumis sativus Cucsa.103470 I 0.668
Cucsa.092250 Cucumis sativus Cucsa.092250 I 0.668
Pm008668 Prunus mume Pm008668 I 0.668
cassava22399.valid.m1 Manihot esculenta cassava22399.valid.m1 I 0.668
cassava25562.m1 Manihot esculenta cassava25562.m1 I 0.668
cassava26004.m1 Manihot esculenta cassava26004.m1 I 0.668
RAX3 Arabidopsis lyrata Al_scaffold_0005_1808 I 0.668
O49746_ARATH Arabidopsis thaliana O49746_ARATH I 0.668
Ciclev10010364m.g Citrus clementina Ciclev10010364m.g I 0.668
PRUPE_ppa023431mg Prunus persica PRUPE_ppa023431mg I 0.668
POPTR_0018s10390 Populus trichocarpa POPTR_0018s10390 I 0.668
POPTR_0002s11440 Populus trichocarpa POPTR_0002s11440 I 0.668
VIT_18s0001g08470 Vitis vinifera VIT_18s0001g08470 I 0.668
POPTR_0007s14630 Populus trichocarpa POPTR_0007s14630 I 0.668
Carubv10018748m.g Capsella rubella Carubv10018748m.g I 0.668
Cla014272 Citrullus lanatus Cla014272 I 0.668
mgf024894m Mimulus guttatus mgf024894m I 0.668
MTR_5g014990 Medicago truncatula MTR_5g014990 I 0.668
Cagra.1838s0012 Capsella grandiflora Cagra.1838s0012 I 0.668
TCM_018082 Theobroma cacao TCM_018082 N 0.667
GSMUA_Achr5G01930_001 Musa acuminata GSMUA_Achr5G01930_001 I 0.667
ORGLA09G0083700 Oryza glaberrima ORGLA09G0083700 I 0.666
OMERI09G08730 Oryza meridionalis OMERI09G08730 I 0.666
Gorai.004G231100 Gossypium raimondii Gorai.004G231100 I 0.666
Pavir.Ia00427 Panicum virgatum Pavir.Ia00427 I 0.665
ORUFI03G37090 Oryza rufipogon ORUFI03G37090 I 0.665
BGIOSGA009746 Oryza indica BGIOSGA009746 I 0.665
Sb01g006800 Sorghum bicolor Sb01g006800 I 0.665
OS03G0771100 Oryza sativa OS03G0771100 I 0.665
OMERI03G32880 Oryza meridionalis OMERI03G32880 I 0.665
ONIVA03G37150 Oryza nivara ONIVA03G37150 I 0.665
ORGLA03G0327000 Oryza glaberrima ORGLA03G0327000 I 0.665
Pavir.J07059 Panicum virgatum Pavir.J07059 I 0.665
OLONG_025560 Oryza longistaminata OLONG_025560 I 0.665
OB03G42660 Oryza brachyantha OB03G42660 I 0.665
LPERR03G29970 Leersia perrieri LPERR03G29970 I 0.665
Eucgr.C02280 Eucalyptus grandis Eucgr.C02280 I 0.665
OGLUM03G35410 Oryza glumaepatula OGLUM03G35410 I 0.665
OBART03G35660 Oryza barthii OBART03G35660 I 0.665
Eucgr.C02391 Eucalyptus grandis Eucgr.C02391 I 0.665
Cla023198 Citrullus lanatus Cla023198 I 0.664
mgf021784m Mimulus guttatus mgf021784m I 0.664
Gorai.013G246200 Gossypium raimondii Gorai.013G246200 I 0.664
BGIOSGA029715 Oryza indica BGIOSGA029715 I 0.663
LPERR09G07880 Leersia perrieri LPERR09G07880 I 0.663
MTR_3g103570 Medicago truncatula MTR_3g103570 I 0.663
OPUNC09G09680 Oryza punctata OPUNC09G09680 I 0.663
LjT05A08.60.nd Lotus japonicus LjT05A08.60.nd I 0.663
OB04G13670 Oryza brachyantha OB04G13670 I 0.663
OPUNC04G04120 Oryza punctata OPUNC04G04120 I 0.663
chr3.CM0070.70.nc Lotus japonicus chr3.CM0070.70.nc I 0.663
Eucgr.B03941 Eucalyptus grandis Eucgr.B03941 I 0.662
ORUFI09G12010 Oryza rufipogon ORUFI09G12010 I 0.662
Cla023006 Citrullus lanatus Cla023006 N 0.662
GSMUA_Achr4G28090_001 Musa acuminata GSMUA_Achr4G28090_001 I 0.661
Cucsa.306690 Cucumis sativus Cucsa.306690 I 0.661
Cla018072 Citrullus lanatus Cla018072 I 0.661
Eucgr.I02017 Eucalyptus grandis Eucgr.I02017 I 0.661
mgf000131m Mimulus guttatus mgf000131m I 0.661