VIT_04s0008g01840 (Vitis vinifera)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 VIT_04s0008g01840 T281920_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB49
M07140_2.00 		Arabidopsis thaliana
HDBBYYACCWAMYWH
DWRKTWGGTRRVVHD		 Dap-seq
OMalley et al.(2016)
MYB49_col_a 		0.676 0.634
MYB49
M07141_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHN
NDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB49_colamp_a 		0.676 0.634
GRMZM2G005066
M11056_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$C1_Q2 		0.664 0.720
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_04s0008g01840.t01 Myb 13 60
VIT_04s0008g01840.t01 Myb 66 111

Links

Other Myb/SANT family TFs
Other Vitis vinifera TFs

260 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava36364.valid.m1 Manihot esculenta cassava36364.valid.m1 I 0.780
AMTR_s00024p00224470 Amborella trichopoda AMTR_s00024p00224470 I 0.778
Lus10033438.g Linum usitatissimum Lus10033438.g I 0.777
Lus10000470.g Linum usitatissimum Lus10000470.g I 0.777
PDK_20s1554342g001 Phoenix dactylifera PDK_20s1554342g001 I 0.775
PRUPE_ppa023768mg Prunus persica PRUPE_ppa023768mg I 0.773
gene15390-v1.0-hybrid Fragaria vesca gene15390-v1.0-hybrid I 0.773
Pm027047 Prunus mume Pm027047 I 0.773
Pm005572 Prunus mume Pm005572 I 0.773
PRUPE_ppa024074mg Prunus persica PRUPE_ppa024074mg I 0.769
GSMUA_Achr3G07940_001 Musa acuminata GSMUA_Achr3G07940_001 I 0.766
GSMUA_Achr8G22690_001 Musa acuminata GSMUA_Achr8G22690_001 I 0.766
GSMUA_Achr6G04400_001 Musa acuminata GSMUA_Achr6G04400_001 I 0.760
AMTR_s00024p00224180 Amborella trichopoda AMTR_s00024p00224180 I 0.758
AMTR_s00024p00224850 Amborella trichopoda AMTR_s00024p00224850 I 0.755
GSMUA_Achr10G17610_001 Musa acuminata GSMUA_Achr10G17610_001 I 0.755
TCM_037377 Theobroma cacao TCM_037377 I 0.753
Eucgr.C00724 Eucalyptus grandis Eucgr.C00724 I 0.753
Gorai.001G020400 Gossypium raimondii Gorai.001G020400 I 0.748
gene07416-v1.0-hybrid Fragaria vesca gene07416-v1.0-hybrid I 0.746
TCM_037379 Theobroma cacao TCM_037379 I 0.745
Eucgr.C02096 Eucalyptus grandis Eucgr.C02096 I 0.745
LjT02E24.110.nc Lotus japonicus LjT02E24.110.nc I 0.745
TCM_004509 Theobroma cacao TCM_004509 I 0.745
MTR_4g125520 Medicago truncatula MTR_4g125520 I 0.745
28226.m000839 Ricinus communis 28226.m000839 I 0.745
GLYMA20G32500 Glycine max GLYMA20G32500 I 0.745
VIT_04s0008g01810 Vitis vinifera VIT_04s0008g01810 I 0.745
cassava3467.m1 Manihot esculenta cassava3467.m1 N 0.742
VIT_04s0008g01820 Vitis vinifera VIT_04s0008g01820 I 0.742
Pm005571 Prunus mume Pm005571 I 0.742
cassava41021.m1 Manihot esculenta cassava41021.m1 I 0.742
cassava28702.m1 Manihot esculenta cassava28702.m1 I 0.741
TCM_037376 Theobroma cacao TCM_037376 I 0.739
gene15392-v1.0-hybrid Fragaria vesca gene15392-v1.0-hybrid I 0.739
VIT_04s0008g01800 Vitis vinifera VIT_04s0008g01800 I 0.739
MDP0000184538 Malus domestica MDP0000184538 I 0.739
PRUPE_ppa019380mg Prunus persica PRUPE_ppa019380mg I 0.738
GRMZM2G701063 Zea mays GRMZM2G701063 I 0.738
TCM_037559 Theobroma cacao TCM_037559 I 0.737
PRUPE_ppa022205mg Prunus persica PRUPE_ppa022205mg I 0.736
POPTR_0006s23840 Populus trichocarpa POPTR_0006s23840 I 0.736
Ca_03154 Cicer arietinum Ca_03154 I 0.736
SapurV1A.0710s0070 Salix purpurea SapurV1A.0710s0070 I 0.736
MDP0000031172 Malus domestica MDP0000031172 I 0.736
LjT02E24.130.nc Lotus japonicus LjT02E24.130.nc I 0.736
MDP0000210851 Malus domestica MDP0000210851 I 0.736
Pm005570 Prunus mume Pm005570 I 0.736
Eucgr.C00722 Eucalyptus grandis Eucgr.C00722 I 0.735
VIT_11s0016g01320 Vitis vinifera VIT_11s0016g01320 I 0.735
PK16315.1 Cannabis sativa PK16315.1 I 0.734
Pm029489 Prunus mume Pm029489 I 0.734
Aquca_076_00099 Aquilegia coerulea Aquca_076_00099 I 0.733
gene15386-v1.0-hybrid Fragaria vesca gene15386-v1.0-hybrid I 0.733
PRUPE_ppa023789mg Prunus persica PRUPE_ppa023789mg I 0.733
PRUPE_ppa023812mg Prunus persica PRUPE_ppa023812mg I 0.731
Eucgr.F03176 Eucalyptus grandis Eucgr.F03176 I 0.729
MDP0000437717 Malus domestica MDP0000437717 I 0.729
LjT02E24.60.nc Lotus japonicus LjT02E24.60.nc I 0.729
Gorai.001G020600 Gossypium raimondii Gorai.001G020600 I 0.728
evm.TU.supercontig_126.33 Carica papaya evm.TU.supercontig_126.33 I 0.727
Ciclev10026498m.g Citrus clementina Ciclev10026498m.g I 0.726
orange1.1g036591m.g Citrus sinensis orange1.1g036591m.g I 0.726
PDK_20s13009436g002 Phoenix dactylifera PDK_20s13009436g002 I 0.726
Pm027045 Prunus mume Pm027045 I 0.725
VIT_09s0002g01400 Vitis vinifera VIT_09s0002g01400 I 0.725
cassava2758.m1 Manihot esculenta cassava2758.m1 I 0.725
TCM_000535 Theobroma cacao TCM_000535 I 0.724
Solyc12g049300.1 Solanum lycopersicum Solyc12g049300.1 I 0.724
GSMUA_Achr9G16040_001 Musa acuminata GSMUA_Achr9G16040_001 I 0.724
Si038905m.g Setaria italica Si038905m.g I 0.723
Gorai.004G044000 Gossypium raimondii Gorai.004G044000 I 0.723
cassava7672.valid.m1 Manihot esculenta cassava7672.valid.m1 I 0.722
Eucgr.C03555 Eucalyptus grandis Eucgr.C03555 I 0.722
Eucgr.C00721 Eucalyptus grandis Eucgr.C00721 I 0.722
PDK_20s1716541g001 Phoenix dactylifera PDK_20s1716541g001 I 0.721
Sb10g006700 Sorghum bicolor Sb10g006700 I 0.721
Gorai.001G015200 Gossypium raimondii Gorai.001G015200 I 0.720
AMTR_s00024p00225650 Amborella trichopoda AMTR_s00024p00225650 N 0.719
Bostr.29044s0068 Boechera stricta Bostr.29044s0068 I 0.719
TT2 Arabidopsis thaliana AT5G35550 I 0.719
Cagra.5428s0005 Capsella grandiflora Cagra.5428s0005 I 0.719
TT2 Arabidopsis lyrata fgenesh2_kg.7__3049__AT5G35550.1 I 0.719
Carubv10006684m.g Capsella rubella Carubv10006684m.g I 0.719
GSMUA_Achr9G27380_001 Musa acuminata GSMUA_Achr9G27380_001 I 0.719
Eucgr.C00723 Eucalyptus grandis Eucgr.C00723 I 0.718
GSMUA_Achr3G07950_001 Musa acuminata GSMUA_Achr3G07950_001 I 0.718
GSMUA_Achr4G21700_001 Musa acuminata GSMUA_Achr4G21700_001 I 0.718
orange1.1g028922m.g Citrus sinensis orange1.1g028922m.g N 0.717
Pavir.Db02046 Panicum virgatum Pavir.Db02046 I 0.717
Ciclev10009521m.g Citrus clementina Ciclev10009521m.g N 0.717
GLYMA10G35061 Glycine max GLYMA10G35061 I 0.716
TCM_010778 Theobroma cacao TCM_010778 I 0.716
cassava36365.valid.m1 Manihot esculenta cassava36365.valid.m1 I 0.716
GLYMA07G04240 Glycine max GLYMA07G04240 I 0.715
Pm013279 Prunus mume Pm013279 I 0.715
LjSGA_029658.1 Lotus japonicus LjSGA_029658.1 I 0.714
SapurV1A.0710s0050 Salix purpurea SapurV1A.0710s0050 I 0.713
VIT_11s0016g01310 Vitis vinifera VIT_11s0016g01310 I 0.713
PRUPE_ppa010252mg Prunus persica PRUPE_ppa010252mg I 0.712
Eucgr.C00725 Eucalyptus grandis Eucgr.C00725 I 0.711
Gorai.004G150800 Gossypium raimondii Gorai.004G150800 I 0.709
ORGLA03G0196700 Oryza glaberrima ORGLA03G0196700 I 0.708
OB03G30160 Oryza brachyantha OB03G30160 I 0.708
GLYMA17G05831 Glycine max GLYMA17G05831 I 0.708
GLYMA13G16890 Glycine max GLYMA13G16890 I 0.708
Sb01g032770 Sorghum bicolor Sb01g032770 I 0.706
GLYMA16G00931 Glycine max GLYMA16G00931 I 0.706
Gorai.003G021100 Gossypium raimondii Gorai.003G021100 I 0.705
MDP0000140609 Malus domestica MDP0000140609 I 0.705
MDP0000887107 Malus domestica MDP0000887107 I 0.705
GLYMA10G35050 Glycine max GLYMA10G35050 I 0.704
Ciclev10009286m.g Citrus clementina Ciclev10009286m.g I 0.704
orange1.1g025602m.g Citrus sinensis orange1.1g025602m.g I 0.703
AMTR_s00030p00146410 Amborella trichopoda AMTR_s00030p00146410 I 0.703
VIT_15s0046g00170 Vitis vinifera VIT_15s0046g00170 I 0.702
gene15383-v1.0-hybrid Fragaria vesca gene15383-v1.0-hybrid N 0.702
OB06G16110 Oryza brachyantha OB06G16110 I 0.701
ORGLA06G0059500 Oryza glaberrima ORGLA06G0059500 I 0.701
SapurV1A.0059s0160 Salix purpurea SapurV1A.0059s0160 I 0.701
ORUFI06G06900 Oryza rufipogon ORUFI06G06900 I 0.701
Ca_12762 Cicer arietinum Ca_12762 N 0.700
gene08694-v1.0-hybrid Fragaria vesca gene08694-v1.0-hybrid I 0.700
30068.m002544 Ricinus communis 30068.m002544 I 0.699
gene15389-v1.0-hybrid Fragaria vesca gene15389-v1.0-hybrid I 0.699
Eucgr.J02817 Eucalyptus grandis Eucgr.J02817 I 0.698
Cla000782 Citrullus lanatus Cla000782 N 0.698
VIT_13s0084g00530 Vitis vinifera VIT_13s0084g00530 I 0.697
GLYMA11G03770 Glycine max GLYMA11G03770 N 0.696
Eucgr.C00826 Eucalyptus grandis Eucgr.C00826 I 0.696
POPTR_0006s23810 Populus trichocarpa POPTR_0006s23810 I 0.696
POPTR_0018s03770 Populus trichocarpa POPTR_0018s03770 I 0.695
Pm027048 Prunus mume Pm027048 I 0.694
Eucgr.B01964 Eucalyptus grandis Eucgr.B01964 I 0.694
PRUPE_ppa017136mg Prunus persica PRUPE_ppa017136mg I 0.694
Eucgr.B01869 Eucalyptus grandis Eucgr.B01869 I 0.694
SapurV1A.0263s0400 Salix purpurea SapurV1A.0263s0400 I 0.693
POPTR_0006s29080 Populus trichocarpa POPTR_0006s29080 I 0.693
GSMUA_Achr3G27700_001 Musa acuminata GSMUA_Achr3G27700_001 I 0.693
Eucgr.J02819 Eucalyptus grandis Eucgr.J02819 N 0.692
POPTR_0018s05530 Populus trichocarpa POPTR_0018s05530 I 0.691
POPTR_0018s05750 Populus trichocarpa POPTR_0018s05750 I 0.691
GLYMA19G44660 Glycine max GLYMA19G44660 I 0.691
Thhalv10003461m.g Eutrema salsugineum Thhalv10003461m.g I 0.689
GSMUA_Achr8G14540_001 Musa acuminata GSMUA_Achr8G14540_001 N 0.689
GSMUA_Achr2G17960_001 Musa acuminata GSMUA_Achr2G17960_001 N 0.689
Eucgr.C03152 Eucalyptus grandis Eucgr.C03152 N 0.689
evm.TU.supercontig_28.71 Carica papaya evm.TU.supercontig_28.71 I 0.688
TCM_037555 Theobroma cacao TCM_037555 I 0.688
Gorai.010G087200 Gossypium raimondii Gorai.010G087200 I 0.688
SapurV1A.0035s0030 Salix purpurea SapurV1A.0035s0030 I 0.688
GSMUA_Achr7G18560_001 Musa acuminata GSMUA_Achr7G18560_001 I 0.686
Gorai.004G130900 Gossypium raimondii Gorai.004G130900 I 0.686
Bo8g030520 Brassica oleracea Bo8g030520 I 0.686
Bra035532 Brassica rapa Bra035532 I 0.686
MDP0000318013 Malus domestica MDP0000318013 I 0.686
Gorai.004G151000 Gossypium raimondii Gorai.004G151000 I 0.685
orange1.1g040841m.g Citrus sinensis orange1.1g040841m.g I 0.685
gene18691-v1.0-hybrid Fragaria vesca gene18691-v1.0-hybrid I 0.685
Gorai.008G126700 Gossypium raimondii Gorai.008G126700 I 0.685
Eucgr.D02390 Eucalyptus grandis Eucgr.D02390 I 0.685
Ciclev10021571m.g Citrus clementina Ciclev10021571m.g I 0.685
TCM_005112 Theobroma cacao TCM_005112 I 0.685
MDP0000915330 Malus domestica MDP0000915330 I 0.685
PK14784.1 Cannabis sativa PK14784.1 I 0.685
SapurV1A.0035s0040 Salix purpurea SapurV1A.0035s0040 I 0.684
POPTR_0003s14430 Populus trichocarpa POPTR_0003s14430 I 0.684
Pm024189 Prunus mume Pm024189 I 0.683
Eucgr.B00373 Eucalyptus grandis Eucgr.B00373 I 0.683
PRUPE_ppa018430mg Prunus persica PRUPE_ppa018430mg I 0.683
Eucgr.C03153 Eucalyptus grandis Eucgr.C03153 N 0.683
gene12738-v1.0-hybrid Fragaria vesca gene12738-v1.0-hybrid I 0.682
PRUPE_ppa009439mg Prunus persica PRUPE_ppa009439mg I 0.682
Pm018338 Prunus mume Pm018338 I 0.682
cassava34176.m1 Manihot esculenta cassava34176.m1 I 0.681
Pm005573 Prunus mume Pm005573 I 0.681
PRUPE_ppa015883mg Prunus persica PRUPE_ppa015883mg I 0.681
Cucsa.119640 Cucumis sativus Cucsa.119640 N 0.680
Gorai.009G040800 Gossypium raimondii Gorai.009G040800 N 0.680
Ca_17627 Cicer arietinum Ca_17627 I 0.679
GSMUA_Achr11G23500_001 Musa acuminata GSMUA_Achr11G23500_001 N 0.678
evm.TU.supercontig_25.114 Carica papaya evm.TU.supercontig_25.114 I 0.678
VIT_11s0016g01300 Vitis vinifera VIT_11s0016g01300 I 0.677
gene25098-v1.0-hybrid Fragaria vesca gene25098-v1.0-hybrid I 0.676
Carubv10026801m.g Capsella rubella Carubv10026801m.g I 0.676
Gorai.009G040900 Gossypium raimondii Gorai.009G040900 N 0.676
Eucgr.C03151 Eucalyptus grandis Eucgr.C03151 I 0.676
fgenesh1_pg.C_scaffold_8001466 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8001466 I 0.676
fgenesh1_pm.C_scaffold_8001114 Arabidopsis lyrata fgenesh1_pm.C_scaffold_8001114 I 0.676
MYB49 Arabidopsis thaliana AT5G54230 D 0.676
Bostr.26833s0846 Boechera stricta Bostr.26833s0846 I 0.676
Thhalv10014125m.g Eutrema salsugineum Thhalv10014125m.g I 0.676
Cagra.1629s0007 Capsella grandiflora Cagra.1629s0007 I 0.676
TCM_015685 Theobroma cacao TCM_015685 I 0.675
Eucgr.E01031 Eucalyptus grandis Eucgr.E01031 I 0.675
SapurV1A.0102s0340 Salix purpurea SapurV1A.0102s0340 I 0.673
SapurV1A.1968s0080 Salix purpurea SapurV1A.1968s0080 I 0.673
SapurV1A.0930s0010 Salix purpurea SapurV1A.0930s0010 I 0.673
SapurV1A.1730s0020 Salix purpurea SapurV1A.1730s0020 I 0.673
Solyc01g005660.1 Solanum lycopersicum Solyc01g005660.1 I 0.673
VIT_08s0007g07230 Vitis vinifera VIT_08s0007g07230 I 0.673
SapurV1A.0710s0030 Salix purpurea SapurV1A.0710s0030 I 0.673
SapurV1A.3493s0010 Salix purpurea SapurV1A.3493s0010 I 0.673
POPTR_0006s23780 Populus trichocarpa POPTR_0006s23780 I 0.673
SapurV1A.0390s0200 Salix purpurea SapurV1A.0390s0200 I 0.673
gene07418-v1.0-hybrid Fragaria vesca gene07418-v1.0-hybrid N 0.673
gene25060-v1.0-hybrid Fragaria vesca gene25060-v1.0-hybrid N 0.672
SapurV1A.0059s0150 Salix purpurea SapurV1A.0059s0150 I 0.672
PDK_20s1918041g001 Phoenix dactylifera PDK_20s1918041g001 I 0.672
POPTR_0003s14420 Populus trichocarpa POPTR_0003s14420 I 0.672
Eucgr.F03175 Eucalyptus grandis Eucgr.F03175 I 0.672
POPTR_0001s11100 Populus trichocarpa POPTR_0001s11100 I 0.672
PDK_20s1310471g002 Phoenix dactylifera PDK_20s1310471g002 I 0.672
VIT_04s0008g01830 Vitis vinifera VIT_04s0008g01830 N 0.671
MTR_4g100720 Medicago truncatula MTR_4g100720 N 0.670
GSMUA_Achr8G12710_001 Musa acuminata GSMUA_Achr8G12710_001 I 0.670
TCM_037383 Theobroma cacao TCM_037383 I 0.669
TCM_029121 Theobroma cacao TCM_029121 I 0.669
MDP0000157940 Malus domestica MDP0000157940 I 0.668
evm.TU.supercontig_96.57 Carica papaya evm.TU.supercontig_96.57 I 0.668
VIT_11s0016g05660 Vitis vinifera VIT_11s0016g05660 N 0.668
GLYMA20G32510 Glycine max GLYMA20G32510 I 0.668
Eucgr.J02816 Eucalyptus grandis Eucgr.J02816 I 0.666
Si008089m.g Setaria italica Si008089m.g I 0.665
29739.m003784 Ricinus communis 29739.m003784 I 0.665
SapurV1A.0013s0160 Salix purpurea SapurV1A.0013s0160 I 0.664
chr1.CM0105.50.nd Lotus japonicus chr1.CM0105.50.nd I 0.664
cassava29820.valid.m1 Manihot esculenta cassava29820.valid.m1 I 0.664
Ca_01329 Cicer arietinum Ca_01329 I 0.664
POPTR_0014s09630 Populus trichocarpa POPTR_0014s09630 I 0.664
MTR_7g117730 Medicago truncatula MTR_7g117730 I 0.664
GRMZM2G005066 Zea mays GRMZM2G005066 D 0.664
GLYMA05G04900 Glycine max GLYMA05G04900 I 0.664
mgf015598m Mimulus guttatus mgf015598m I 0.663
mgf006108m Mimulus guttatus mgf006108m I 0.663
TCM_025910 Theobroma cacao TCM_025910 I 0.662
cassava6348.valid.m1 Manihot esculenta cassava6348.valid.m1 I 0.662
TCM_024180 Theobroma cacao TCM_024180 I 0.662
POPTR_0013s05300 Populus trichocarpa POPTR_0013s05300 I 0.662
MTR_8g027345 Medicago truncatula MTR_8g027345 I 0.662
POPTR_0002s17460 Populus trichocarpa POPTR_0002s17460 I 0.662
POPTR_0003s21120 Populus trichocarpa POPTR_0003s21120 I 0.662
cassava9274.m1 Manihot esculenta cassava9274.m1 I 0.662
PRUPE_ppa006730mg Prunus persica PRUPE_ppa006730mg I 0.662
Cucsa.304110 Cucumis sativus Cucsa.304110 I 0.662
MDP0000655330 Malus domestica MDP0000655330 I 0.662
Gorai.007G350500 Gossypium raimondii Gorai.007G350500 I 0.662
SapurV1A.0081s0400 Salix purpurea SapurV1A.0081s0400 I 0.662
MDP0000723614 Malus domestica MDP0000723614 I 0.662
orange1.1g040726m.g Citrus sinensis orange1.1g040726m.g I 0.662
MDP0000791870 Malus domestica MDP0000791870 I 0.662
SapurV1A.0003s0900 Salix purpurea SapurV1A.0003s0900 I 0.662
evm.TU.supercontig_119.55 Carica papaya evm.TU.supercontig_119.55 I 0.662
Ciclev10015648m.g Citrus clementina Ciclev10015648m.g I 0.662
SapurV1A.1276s0050 Salix purpurea SapurV1A.1276s0050 I 0.662
SapurV1A.0553s0100 Salix purpurea SapurV1A.0553s0100 I 0.662
Eucgr.B03606 Eucalyptus grandis Eucgr.B03606 I 0.662
SapurV1A.0553s0110 Salix purpurea SapurV1A.0553s0110 I 0.662
Ca_10014 Cicer arietinum Ca_10014 I 0.661
MTR_8g020490 Medicago truncatula MTR_8g020490 I 0.661