VIT_04s0023g03710 (Vitis vinifera)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 VIT_04s0023g03710 T281926_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB4
M02303_2.00
Arabidopsis thaliana
YACCWACY

RGTWGGTR
PBM
Weirauch et al.(2014)
pTH7075
0.858 0.946
MYB4
M07115_2.00
Arabidopsis thaliana
NYYACCWAMHWHNDD

HHNDWDKTWGGTRRN
Dap-seq
OMalley et al.(2016)
MYB4_col200_a
0.858 0.946
MYB3
M02288_2.00
Arabidopsis thaliana
NNYACCTACCN

NGGTAGGTRNN
PBM
Weirauch et al.(2014)
pTH7125
0.783 0.882
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_04s0023g03710.t01 Myb 14 61
VIT_04s0023g03710.t01 Myb 67 112

Links

Other Myb/SANT family TFs
Other Vitis vinifera TFs

493 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GRMZM2G045748 Zea mays GRMZM2G045748 I 0.000
GRMZM2G056407 Zea mays GRMZM2G056407 I 0.000
BGIOSGA017070 Oryza indica BGIOSGA017070 N 0.000
cassava2660.m1 Manihot esculenta cassava2660.m1 N 0.000
30147.m013953 Ricinus communis 30147.m013953 N 0.000
Traes_2DL_27DDC281B Triticum aestivum Traes_2DL_27DDC281B N 0.000
ORUFI03G10510 Oryza rufipogon ORUFI03G10510 N 0.000
ORGLA06G0059700 Oryza glaberrima ORGLA06G0059700 N 0.000
ORGLA05G0203100 Oryza glaberrima ORGLA05G0203100 N 0.000
ORGLA04G0211100 Oryza glaberrima ORGLA04G0211100 N 0.000
ORGLA03G0099100 Oryza glaberrima ORGLA03G0099100 N 0.000
OBART03G10300 Oryza barthii OBART03G10300 N 0.000
Bo5g007300 Brassica oleracea Bo5g007300 N 0.000
BGIOSGA036890 Oryza indica BGIOSGA036890 N 0.000
LjSGA_066152.1 Lotus japonicus LjSGA_066152.1 N 0.000