VIT_06s0080g00790 (Vitis vinifera)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 VIT_06s0080g00790 T281950_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT5G04760
M02304_2.00
Arabidopsis thaliana
NDGATAAGGN

NCCTTATCHN
PBM
Weirauch et al.(2014)
pTH7079
0.701 0.734
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_06s0080g00790.t01 Myb 20 69
VIT_06s0080g00790.t01 Myb 119 166

Links

Other Myb/SANT family TFs
Other Vitis vinifera TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30055.m001589 Ricinus communis 30055.m001589 I 0.791
cassava42566.valid.m1 Manihot esculenta cassava42566.valid.m1 N 0.761
SapurV1A.1671s0040 Salix purpurea SapurV1A.1671s0040 I 0.756
GLYMA10G42450 Glycine max GLYMA10G42450 I 0.754
GLYMA20G24600 Glycine max GLYMA20G24600 I 0.754
orange1.1g026855m.g Citrus sinensis orange1.1g026855m.g N 0.744
Ciclev10029205m.g Citrus clementina Ciclev10029205m.g N 0.744
SapurV1A.0450s0110 Salix purpurea SapurV1A.0450s0110 I 0.732
Ciclev10016071m.g Citrus clementina Ciclev10016071m.g I 0.728
TCM_041362 Theobroma cacao TCM_041362 N 0.726
Ca_05454 Cicer arietinum Ca_05454 I 0.724
MTR_1g111830 Medicago truncatula MTR_1g111830 I 0.714
Aquca_072_00078 Aquilegia coerulea Aquca_072_00078 N 0.707
Cagra.5249s0014 Capsella grandiflora Cagra.5249s0014 I 0.701
AT5G04760 Arabidopsis thaliana AT5G04760 D 0.701
Bo3g002960 Brassica oleracea Bo3g002960 I 0.701
Bo9g178980 Brassica oleracea Bo9g178980 I 0.701
Bostr.13129s0486 Boechera stricta Bostr.13129s0486 I 0.701
Carubv10003623m.g Capsella rubella Carubv10003623m.g I 0.701
scaffold_600421.1 Arabidopsis lyrata scaffold_600421.1 I 0.701
Bra009432 Brassica rapa Bra009432 I 0.701
Bra005818 Brassica rapa Bra005818 I 0.701
Bo2g006670 Brassica oleracea Bo2g006670 I 0.700
gene23544-v1.0-hybrid Fragaria vesca gene23544-v1.0-hybrid I 0.694
Pm017050 Prunus mume Pm017050 I 0.694
PRUPE_ppa010926mg Prunus persica PRUPE_ppa010926mg I 0.694
Cla013899 Citrullus lanatus Cla013899 N 0.690
Thhalv10014613m.g Eutrema salsugineum Thhalv10014613m.g I 0.687
Bra028780 Brassica rapa Bra028780 I 0.686
Gorai.006G113100 Gossypium raimondii Gorai.006G113100 N 0.684
GSMUA_Achr11G09110_001 Musa acuminata GSMUA_Achr11G09110_001 N 0.684
MDP0000289018 Malus domestica MDP0000289018 I 0.678
TCM_041160 Theobroma cacao TCM_041160 I 0.675
30131.m007263 Ricinus communis 30131.m007263 I 0.672
Pavir.Gb00055 Panicum virgatum Pavir.Gb00055 N 0.670
VIT_10s0071g00660 Vitis vinifera VIT_10s0071g00660 I 0.670
GSMUA_Achr9G20620_001 Musa acuminata GSMUA_Achr9G20620_001 I 0.670
Cucsa.364590 Cucumis sativus Cucsa.364590 N 0.668
Aquca_004_00257 Aquilegia coerulea Aquca_004_00257 N 0.667
Si022762m.g Setaria italica Si022762m.g N 0.662
Cucsa.280970 Cucumis sativus Cucsa.280970 I 0.661