VIT_07s0005g04120 (Vitis vinifera)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 VIT_07s0005g04120 T281957_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PHL1
M02310_2.00
Arabidopsis thaliana
NWKATNCBNN

NNVGNATMWN
PBM
Weirauch et al.(2014)
pTH7122
0.860 0.936
PHL1
M07132_2.00
Arabidopsis thaliana
MDRGAATATTCBNWN

NWNVGAATATTCYHK
Dap-seq
OMalley et al.(2016)
At5g29000_col_a
0.860 0.936
PHR1
M02302_2.00
Arabidopsis thaliana
NWKATNCBNN

NNVGNATMWN
PBM
Weirauch et al.(2014)
pTH7249
0.831 0.957
AT2G20400
M07046_2.00
Arabidopsis thaliana
NDNNDNHNNVDDDNNNHAWRGMATATTCB

VGAATATKCYWTDNNNHHHBNNDNHNNHN
Dap-seq
OMalley et al.(2016)
AT2G20400_col_a
0.801 0.915
AT2G20400
M07047_2.00
Arabidopsis thaliana
RDRGAATATTCBNWD

HWNVGAATATTCYHY
Dap-seq
OMalley et al.(2016)
AT2G20400_colamp_a
0.801 0.915
PHR1
M02329_2.00
Oryza sativa
NWKATNCBNN

NNVGNATMWN
PBM
Weirauch et al.(2014)
pTH7755
0.800 0.936
PHL7
M02292_2.00
Arabidopsis thaliana
NWGATDCBNN

NNVGHATCWN
PBM
Weirauch et al.(2014)
pTH7253
0.745 0.809
PK10342.1
M02351_2.00
Cannabis sativa
WAGATKCS

SGMATCTW
PBM
Weirauch et al.(2014)
pTH9489
0.745 0.809
PHL7
M07040_2.00
Arabidopsis thaliana
DRNAKATTCBNHNNN

NNNDNVGAATMTNYH
Dap-seq
OMalley et al.(2016)
At2g01060_colamp_a
0.745 0.809
PHL7
M07041_2.00
Arabidopsis thaliana
VGAATATTCBNHH

DDNVGAATATTCB
Dap-seq
OMalley et al.(2016)
At2g01060_col
0.745 0.809
PHL6
M02295_2.00
Arabidopsis thaliana
NNWKATNCBN

NVGNATMWNN
PBM
Weirauch et al.(2014)
pTH7071
0.735 0.809
PHL6
M07083_2.00
Arabidopsis thaliana
NDGAAAACH

DGTTTTCHN
Dap-seq
OMalley et al.(2016)
At3g13040_col_b
0.735 0.809
Q5IWM2_WHEAT
M11059_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MYB80_01
0.681 0.723
MYR1
M02309_2.00
Arabidopsis thaliana
NKATNCBNNN

NNNVGNATMN
PBM
Weirauch et al.(2014)
pTH8859
0.679 0.745
MYR2
M02294_2.00
Arabidopsis thaliana
NKATDCBNN

NNVGHATMN
PBM
Weirauch et al.(2014)
pTH7097
0.673 0.723
MYR2
M07063_2.00
Arabidopsis thaliana
NNDAAKATTCYHHN

NDDRGAATMTTHNN
Dap-seq
OMalley et al.(2016)
At3g04030_col_a
0.673 0.723
MYR2
M07064_2.00
Arabidopsis thaliana
VRAAKATTCBHWNNN

NNNWDVGAATMTTYB
Dap-seq
OMalley et al.(2016)
At3g04030_colamp_a
0.673 0.723
AT3G24120
M00729_2.00
Arabidopsis thaliana
NNKATDCBNN

NNVGHATMNN
PBM
Chang et al.(2013)
pTH7086
0.661 0.681
UNE16
M01270_2.00
Arabidopsis thaliana
NWKATTCBNN

NNVGAATMWN
PBM
Lambert et al.(2019)
pTH9967
0.661 0.681
AT3G24120
M07085_2.00
Arabidopsis thaliana
HAKATTCB

VGAATMTD
Dap-seq
OMalley et al.(2016)
At3g24120_col_a
0.661 0.681
AT3G24120
M07086_2.00
Arabidopsis thaliana
NDRAAKATTCBHHN

NDDVGAATMTTYHN
Dap-seq
OMalley et al.(2016)
At3g24120_colamp_a
0.661 0.681
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_07s0005g04120.t01 Myb 268 319

Links

Other Myb/SANT family TFs
Other Vitis vinifera TFs

778 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL004648 Aedes aegypti AAEL004648 N 0.000
AALB008595 Anopheles albimanus AALB008595 N 0.000
AARA002190 Anopheles arabiensis AARA002190 I 0.000
AATE009125 Anopheles atroparvus AATE009125 I 0.000
ACHR008743 Anopheles christyi ACHR008743 I 0.000
ACOM034602 Anopheles coluzzii ACOM034602 I 0.000
ACUA024289 Anopheles culicifacies ACUA024289 I 0.000
ADAC000892 Anopheles darlingi ADAC000892 N 0.000
ADIR010357 Anopheles dirus ADIR010357 I 0.000
AEPI001149 Anopheles epiroticus AEPI001149 I 0.000
AFAF015777 Anopheles farauti AFAF015777 I 0.000
AFUN009378 Anopheles funestus AFUN009378 I 0.000
AGAP001741 Anopheles gambiae AGAP001741 I 0.000
AMEC017901 Anopheles melas AMEC017901 I 0.000
AMEM005862 Anopheles merus AMEM005862 I 0.000
AMIN003549 Anopheles minimus AMIN003549 I 0.000
AQUA000607 Anopheles quadriannulatus AQUA000607 I 0.000
ASIS001094 Anopheles sinensis ASIS001094 I 0.000
ato Drosophila melanogaster FBgn0010433 D 0.000
ato Drosophila pseudoobscura FBgn0080396 I 0.000
GF18335 Drosophila ananassae FBgn0095353 I 0.000
GG24254 Drosophila erecta FBgn0116386 I 0.000
GH18671 Drosophila grimshawi FBgn0126138 I 0.000
GL23421 Drosophila persimilis FBgn0161011 I 0.000
GM23715 Drosophila sechellia FBgn0178580 I 0.000
GD18530 Drosophila simulans FBgn0190053 I 0.000
GK11390 Drosophila willistoni FBgn0213401 I 0.000
GE25860 Drosophila yakuba FBgn0242910 I 0.000
ato Drosophila virilis FBgn0261282 I 0.000
LCUP004315 Lucilia cuprina LCUP004315 I 0.000
MDOA011891 Musca domestica MDOA011891 I 0.000
MESCA001470 Megaselia scalaris MESCA001470 I 0.000