VIT_16s0050g00050 (Vitis vinifera)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 VIT_16s0050g00050 T282074_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB55
M00876_2.00 		Arabidopsis thaliana
ACCWAMCD
HGKTWGGT		 PBM
Franco-Zorrilla et al.(2014)
MYB55 		0.665 0.720
MYB55
M07102_2.00 		Arabidopsis thaliana
HNNNHBYAMCWAMCD
HGKTWGKTRVDNNND		 Dap-seq
OMalley et al.(2016)
MYB55_colamp_a 		0.665 0.720
MYB55
M07103_2.00 		Arabidopsis thaliana
NYNYAMCHACCRHH
DDYGGTDGKTRNRN		 Dap-seq
OMalley et al.(2016)
MYB55_col 		0.665 0.720
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_16s0050g00050.t01 Myb 17 64
VIT_16s0050g00050.t01 Myb 70 115

Links

Other Myb/SANT family TFs
Other Vitis vinifera TFs

135 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava26284.m1 Manihot esculenta cassava26284.m1 I 0.798
Gorai.008G277900 Gossypium raimondii Gorai.008G277900 I 0.783
Eucgr.A02796 Eucalyptus grandis Eucgr.A02796 I 0.778
Gorai.007G011100 Gossypium raimondii Gorai.007G011100 I 0.770
POPTR_0015s13190 Populus trichocarpa POPTR_0015s13190 I 0.766
Lus10039213.g Linum usitatissimum Lus10039213.g I 0.765
TCM_015157 Theobroma cacao TCM_015157 I 0.759
evm.TU.supercontig_107.47 Carica papaya evm.TU.supercontig_107.47 I 0.759
orange1.1g045400m.g Citrus sinensis orange1.1g045400m.g I 0.758
PRUPE_ppa019729mg Prunus persica PRUPE_ppa019729mg I 0.757
Pm019344 Prunus mume Pm019344 I 0.757
gene13281-v1.0-hybrid Fragaria vesca gene13281-v1.0-hybrid I 0.756
Lus10027458.g Linum usitatissimum Lus10027458.g I 0.755
Eucgr.K00250 Eucalyptus grandis Eucgr.K00250 I 0.754
SapurV1A.1253s0100 Salix purpurea SapurV1A.1253s0100 I 0.754
MDP0000152575 Malus domestica MDP0000152575 I 0.753
SapurV1A.0754s0180 Salix purpurea SapurV1A.0754s0180 I 0.745
PGSC0003DMG400014291 Solanum tuberosum PGSC0003DMG400014291 I 0.744
MDP0000896053 Malus domestica MDP0000896053 I 0.738
PK18276.1 Cannabis sativa PK18276.1 I 0.738
Ciclev10006897m.g Citrus clementina Ciclev10006897m.g N 0.736
ORUFI02G01120 Oryza rufipogon ORUFI02G01120 I 0.735
OPUNC02G00570 Oryza punctata OPUNC02G00570 I 0.735
ORGLA02G0010000 Oryza glaberrima ORGLA02G0010000 I 0.735
Sb04g001110 Sorghum bicolor Sb04g001110 I 0.735
Traes_6BS_B2C9F123A Triticum aestivum Traes_6BS_B2C9F123A I 0.735
Pavir.Aa03518 Panicum virgatum Pavir.Aa03518 I 0.735
OB02G10930 Oryza brachyantha OB02G10930 I 0.735
Pavir.J24194 Panicum virgatum Pavir.J24194 I 0.735
TRIUR3_11495 Triticum urartu TRIUR3_11495 I 0.735
Traes_6DS_8F05AE571 Triticum aestivum Traes_6DS_8F05AE571 I 0.735
Si017899m.g Setaria italica Si017899m.g I 0.735
Traes_6AS_7C1FD879C Triticum aestivum Traes_6AS_7C1FD879C I 0.735
F775_16743 Aegilops tauschii F775_16743 I 0.735
MLOC_58869 Hordeum vulgare MLOC_58869 I 0.735
LPERR02G00910 Leersia perrieri LPERR02G00910 I 0.735
BRADI3G01377 Brachypodium distachyon BRADI3G01377 I 0.735
GRMZM2G088189 Zea mays GRMZM2G088189 I 0.735
BGIOSGA007254 Oryza indica BGIOSGA007254 I 0.735
chr5.CM0148.380.nc Lotus japonicus chr5.CM0148.380.nc I 0.733
POPTR_0012s13260 Populus trichocarpa POPTR_0012s13260 I 0.732
Cla001724 Citrullus lanatus Cla001724 I 0.732
MTR_1g100667 Medicago truncatula MTR_1g100667 I 0.724
cassava21326.m1 Manihot esculenta cassava21326.m1 I 0.720
Solyc03g025870.2 Solanum lycopersicum Solyc03g025870.2 I 0.719
Lus10005739.g Linum usitatissimum Lus10005739.g I 0.717
Ca_19758 Cicer arietinum Ca_19758 I 0.707
AMTR_s00036p00107460 Amborella trichopoda AMTR_s00036p00107460 I 0.701
SapurV1A.0442s0250 Salix purpurea SapurV1A.0442s0250 I 0.699
POPTR_0013s00290 Populus trichocarpa POPTR_0013s00290 I 0.699
MTR_6g055910 Medicago truncatula MTR_6g055910 I 0.698
GLYMA10G38110 Glycine max GLYMA10G38110 I 0.698
GLYMA20G29710 Glycine max GLYMA20G29710 I 0.698
GLYMA16G31280 Glycine max GLYMA16G31280 I 0.697
Eucgr.B01827 Eucalyptus grandis Eucgr.B01827 I 0.696
orange1.1g021164m.g Citrus sinensis orange1.1g021164m.g I 0.694
Ciclev10017658m.g Citrus clementina Ciclev10017658m.g I 0.694
Lus10005740.g Linum usitatissimum Lus10005740.g I 0.693
Cucsa.313950 Cucumis sativus Cucsa.313950 I 0.692
MTR_7g111290 Medicago truncatula MTR_7g111290 I 0.691
Eucgr.K00251 Eucalyptus grandis Eucgr.K00251 N 0.690
GSMUA_Achr1G17480_001 Musa acuminata GSMUA_Achr1G17480_001 N 0.689
SapurV1A.1253s0080 Salix purpurea SapurV1A.1253s0080 I 0.688
POPTR_0012s13240 Populus trichocarpa POPTR_0012s13240 I 0.688
GLYMA09G25655 Glycine max GLYMA09G25655 I 0.686
GSMUA_Achr8G11340_001 Musa acuminata GSMUA_Achr8G11340_001 I 0.684
mgf024114m Mimulus guttatus mgf024114m I 0.682
LPERR04G16000 Leersia perrieri LPERR04G16000 I 0.676
Aquca_034_00423 Aquilegia coerulea Aquca_034_00423 I 0.676
Bra018027 Brassica rapa Bra018027 I 0.676
Eucgr.K02806 Eucalyptus grandis Eucgr.K02806 I 0.675
Cucsa.195180 Cucumis sativus Cucsa.195180 I 0.674
Cla017541 Citrullus lanatus Cla017541 I 0.674
BRADI5G16672 Brachypodium distachyon BRADI5G16672 I 0.673
Traes_2BL_604FE7639 Triticum aestivum Traes_2BL_604FE7639 I 0.673
Traes_2BL_03F3475CD Triticum aestivum Traes_2BL_03F3475CD I 0.673
Traes_2AL_962A9D448 Triticum aestivum Traes_2AL_962A9D448 I 0.673
GRMZM2G170049 Zea mays GRMZM2G170049 I 0.672
F775_08647 Aegilops tauschii F775_08647 I 0.672
Traes_6DL_A014E9069 Triticum aestivum Traes_6DL_A014E9069 I 0.672
Traes_6AL_D10CBA40D Triticum aestivum Traes_6AL_D10CBA40D I 0.672
MLOC_13019 Hordeum vulgare MLOC_13019 I 0.672
TRIUR3_32691 Triticum urartu TRIUR3_32691 I 0.672
Traes_6BL_CE61B9510 Triticum aestivum Traes_6BL_CE61B9510 I 0.672
OB04G26810 Oryza brachyantha OB04G26810 I 0.671
Cla003497 Citrullus lanatus Cla003497 I 0.670
Thhalv10010657m.g Eutrema salsugineum Thhalv10010657m.g I 0.669
Bostr.18473s0062 Boechera stricta Bostr.18473s0062 I 0.669
BRADI3G49970 Brachypodium distachyon BRADI3G49970 I 0.667
Si017947m.g Setaria italica Si017947m.g I 0.666
Pavir.Ab02417 Panicum virgatum Pavir.Ab02417 I 0.666
ORUFI02G26980 Oryza rufipogon ORUFI02G26980 I 0.666
MYB55 Arabidopsis thaliana AT4G01680 D 0.665
MYB55 Arabidopsis lyrata fgenesh2_kg.6__3543__AT4G01680.1 I 0.665
GLYMA03G38660 Glycine max GLYMA03G38660 I 0.665
Carubv10018592m.g Capsella rubella Carubv10018592m.g I 0.665
Thhalv10028778m.g Eutrema salsugineum Thhalv10028778m.g I 0.665
Cagra.0334s0011 Capsella grandiflora Cagra.0334s0011 I 0.665
Bostr.4825s0008 Boechera stricta Bostr.4825s0008 I 0.665
Ca_03589 Cicer arietinum Ca_03589 I 0.665
GLYMA20G22230 Glycine max GLYMA20G22230 I 0.665
Cagra.2337s0007 Capsella grandiflora Cagra.2337s0007 I 0.665
Carubv10001308m.g Capsella rubella Carubv10001308m.g I 0.665
MTR_1g085040 Medicago truncatula MTR_1g085040 I 0.665
GLYMA19G41250 Glycine max GLYMA19G41250 I 0.665
GLYMA12G06180 Glycine max GLYMA12G06180 I 0.664
VIT_06s0004g02110 Vitis vinifera VIT_06s0004g02110 I 0.664
MDP0000722954 Malus domestica MDP0000722954 I 0.664
MTR_4g065017 Medicago truncatula MTR_4g065017 I 0.664
PRUPE_ppa009566mg Prunus persica PRUPE_ppa009566mg I 0.664
PK13930.1 Cannabis sativa PK13930.1 I 0.664
POPTR_0009s05860 Populus trichocarpa POPTR_0009s05860 I 0.664
SapurV1A.0534s0230 Salix purpurea SapurV1A.0534s0230 I 0.664
MDP0000204495 Malus domestica MDP0000204495 I 0.664
Lus10031281.g Linum usitatissimum Lus10031281.g I 0.664
evm.TU.supercontig_84.59 Carica papaya evm.TU.supercontig_84.59 I 0.664
GLYMA11G14200 Glycine max GLYMA11G14200 I 0.664
cassava30676.valid.m1 Manihot esculenta cassava30676.valid.m1 I 0.664
cassava5203.m1 Manihot esculenta cassava5203.m1 I 0.664
Aquca_011_00538 Aquilegia coerulea Aquca_011_00538 I 0.663
gw1.149.61.1 Physcomitrella patens gw1.149.61.1 I 0.662
ONIVA04G19740 Oryza nivara ONIVA04G19740 I 0.661
OS04G0594100 Oryza sativa OS04G0594100 I 0.661
Si010384m.g Setaria italica Si010384m.g I 0.661
PDK_20s1427521g001 Phoenix dactylifera PDK_20s1427521g001 I 0.661
ORGLA04G0202400 Oryza glaberrima ORGLA04G0202400 I 0.661
ORUFI04G25410 Oryza rufipogon ORUFI04G25410 I 0.661
BGIOSGA014440 Oryza indica BGIOSGA014440 I 0.661
Ca_01072 Cicer arietinum Ca_01072 I 0.661
Bra036317 Brassica rapa Bra036317 I 0.661
OBART04G23680 Oryza barthii OBART04G23680 I 0.661
Bo9g004210 Brassica oleracea Bo9g004210 I 0.661
OPUNC04G21230 Oryza punctata OPUNC04G21230 I 0.661
OGLUM04G23630 Oryza glumaepatula OGLUM04G23630 I 0.661
OMERI04G19570 Oryza meridionalis OMERI04G19570 I 0.661